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The map label for this gene is rodZ [H]

Identifier: 83721616

GI number: 83721616

Start: 2509879

End: 2510961

Strand: Direct

Name: rodZ [H]

Synonym: BTH_I2233

Alternate gene names: 83721616

Gene position: 2509879-2510961 (Clockwise)

Preceding gene: 83720408

Following gene: 83718466

Centisome position: 65.89

GC content: 72.48

Gene sequence:

>1083_bases
ATGAGCGAACCGCAGCCGTCAAGGAGCCCGGAGACGAACGCAGGCGAGAAACCGGCGGCGGCCGGTGGCGGCATTGCGTC
GGTCGCGGCAGTGGGCGCACGGCTCGCGGAGTTGCGTGAGGCGAAGGGGTGGTCGGTCGATGACGTGTCCGCGCGGCTGA
AGGTCGCGGCGCCGAAGCTGCAGGCGCTCGAGGCGGGCGACACGAGCCAGTTGCCGGGCGCGACGTTCGCGCTTGGCCTC
GTGCGCAGCTACGCAAAGATGCTCGGTGTCGATCCGGAGCCGTTCGCGCAGGCGCTGCGCCGGGAGAAGGGCGTGCCCGA
GGTCGATCTTTCGATGCCTGCGTCGGCCGGCACCGATCTGCCGCGCGGCCGGGTGTCGATCCCGCTGGGCGGTTCGTCGC
GCGGCCGGCCGTGGCTGTGGGCGATCGCGGCGGTCGTCGTCGCGCTCGTCGCGGCGGCGATGTGGCGCACGGGCGGCGAA
TCGTCGAACTGGCTCGCGCGTTTCAAGTCGAACGGCGCGGGCGAGGCCGCGTCGGCCGCGCACGCGCAGCAGGGAGGCGT
TGCATCCGATCTGCCGGCGAGTGCGGCGGTGTCGGGCACGGTGACGCAGGCTGGCGCGATCGCGACGCCGCCGGTCGGCG
GCGCGTCGGCGGACGAGGCGGCCACGGCGAGCGTGTCGGCCGGGAGCTCGGCGCCCGTCGTCGCGAGCGCGGCGGTCGCG
CCTTTCGCTTCGACGCCGGTTGCCGCCGTGCAACAAGCGCAACCTGCGCAAACGACGCAACCAGCGGCCGCGTCAACGGC
CGACGCCGCGAGCGCGGCCGTCACGGTCGCGCCTGGCCAGTCGGTCGTTGCGCTGAAGGTCGCGCAGGACTGCTGGTTCA
GCGTGCGCGACAAGAACGGCAAGGAGCTGTTCTCGGCCCTCGTGCGCGCCGGCGAGACGAAGCAGGTCGCGGGCGATGCG
CCGCTCAAGATCACGATCGGCAACAAGGCCGGGCTCGAATCGGTCGCTTTCGACGGCAAGCCCGTTGATCCGGCAAAATA
CTCGGCGGCTCGGGGCAACGTCGCGCGTTTCGCATTGCCCTGA

Upstream 100 bases:

>100_bases
CGGCGCACGGCGCCGCGCAGTGTGTGACAACGGTGGTGTTGCGGGCCCGGCCGGAATTGGCGCGGGCGTGCAGGCAAGAA
GAATCGACGCGAGGATGAGG

Downstream 100 bases:

>100_bases
CGGCAAGCGCCGCGTCCGGCCAGGCGCGGCGCTTTTCCCTTTCGCGCGCCGCCGGGCAGGCGGCGCGTTTGGCGTAAATT
GGATCTATCGATGCAATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSEPQPSRSPETNAGEKPAAAGGGIASVAAVGARLAELREAKGWSVDDVSARLKVAAPKLQALEAGDTSQLPGATFALGL
VRSYAKMLGVDPEPFAQALRREKGVPEVDLSMPASAGTDLPRGRVSIPLGGSSRGRPWLWAIAAVVVALVAAAMWRTGGE
SSNWLARFKSNGAGEAASAAHAQQGGVASDLPASAAVSGTVTQAGAIATPPVGGASADEAATASVSAGSSAPVVASAAVA
PFASTPVAAVQQAQPAQTTQPAAASTADAASAAVTVAPGQSVVALKVAQDCWFSVRDKNGKELFSALVRAGETKQVAGDA
PLKITIGNKAGLESVAFDGKPVDPAKYSAARGNVARFALP

Sequences:

>Translated_360_residues
MSEPQPSRSPETNAGEKPAAAGGGIASVAAVGARLAELREAKGWSVDDVSARLKVAAPKLQALEAGDTSQLPGATFALGL
VRSYAKMLGVDPEPFAQALRREKGVPEVDLSMPASAGTDLPRGRVSIPLGGSSRGRPWLWAIAAVVVALVAAAMWRTGGE
SSNWLARFKSNGAGEAASAAHAQQGGVASDLPASAAVSGTVTQAGAIATPPVGGASADEAATASVSAGSSAPVVASAAVA
PFASTPVAAVQQAQPAQTTQPAAASTADAASAAVTVAPGQSVVALKVAQDCWFSVRDKNGKELFSALVRAGETKQVAGDA
PLKITIGNKAGLESVAFDGKPVDPAKYSAARGNVARFALP
>Mature_359_residues
SEPQPSRSPETNAGEKPAAAGGGIASVAAVGARLAELREAKGWSVDDVSARLKVAAPKLQALEAGDTSQLPGATFALGLV
RSYAKMLGVDPEPFAQALRREKGVPEVDLSMPASAGTDLPRGRVSIPLGGSSRGRPWLWAIAAVVVALVAAAMWRTGGES
SNWLARFKSNGAGEAASAAHAQQGGVASDLPASAAVSGTVTQAGAIATPPVGGASADEAATASVSAGSSAPVVASAAVAP
FASTPVAAVQQAQPAQTTQPAAASTADAASAAVTVAPGQSVVALKVAQDCWFSVRDKNGKELFSALVRAGETKQVAGDAP
LKITIGNKAGLESVAFDGKPVDPAKYSAARGNVARFALP

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=341, Percent_Identity=28.4457478005865, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 35745; Mature: 35614

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPQPSRSPETNAGEKPAAAGGGIASVAAVGARLAELREAKGWSVDDVSARLKVAAPKL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCHH
QALEAGDTSQLPGATFALGLVRSYAKMLGVDPEPFAQALRREKGVPEVDLSMPASAGTDL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCC
PRGRVSIPLGGSSRGRPWLWAIAAVVVALVAAAMWRTGGESSNWLARFKSNGAGEAASAA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHH
HAQQGGVASDLPASAAVSGTVTQAGAIATPPVGGASADEAATASVSAGSSAPVVASAAVA
HHHCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCHHHHHHC
PFASTPVAAVQQAQPAQTTQPAAASTADAASAAVTVAPGQSVVALKVAQDCWFSVRDKNG
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEHHHHHHEECCCCH
KELFSALVRAGETKQVAGDAPLKITIGNKAGLESVAFDGKPVDPAKYSAARGNVARFALP
HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCHHHHHCCCCEEEECCC
>Mature Secondary Structure 
SEPQPSRSPETNAGEKPAAAGGGIASVAAVGARLAELREAKGWSVDDVSARLKVAAPKL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCHH
QALEAGDTSQLPGATFALGLVRSYAKMLGVDPEPFAQALRREKGVPEVDLSMPASAGTDL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCC
PRGRVSIPLGGSSRGRPWLWAIAAVVVALVAAAMWRTGGESSNWLARFKSNGAGEAASAA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHH
HAQQGGVASDLPASAAVSGTVTQAGAIATPPVGGASADEAATASVSAGSSAPVVASAAVA
HHHCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCHHHHHHC
PFASTPVAAVQQAQPAQTTQPAAASTADAASAAVTVAPGQSVVALKVAQDCWFSVRDKNG
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEHHHHHHEECCCCH
KELFSALVRAGETKQVAGDAPLKITIGNKAGLESVAFDGKPVDPAKYSAARGNVARFALP
HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA