| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yjjL [C]
Identifier: 83721301
GI number: 83721301
Start: 3201242
End: 3202480
Strand: Reverse
Name: yjjL [C]
Synonym: BTH_I2786
Alternate gene names: 83721301
Gene position: 3202480-3201242 (Counterclockwise)
Preceding gene: 83719197
Following gene: 83719900
Centisome position: 84.07
GC content: 69.81
Gene sequence:
>1239_bases GTGATCGTGATGTCCCCCGTGCAATTTCGCGTGTTCGCGCTGTTCGCGATCGGCTATTTCGTTTCGTACGTCTTTCGCGG CGTGAATCTCGGCTTCGCGCCGCTCATCACGCGCGACCTCGGCCTGTCCGCCGCGGATCTCGGGCTGCTGACGAGCCTTT ACTTCCTCGGCTTCGCGTGCGCGCAGATTCCGGCCGGCGTGCTGCTCGACCGCTACGGCCCGCGCCGCGTGAGCGCCGCG CTGCTGCTCGTCGCGGCGGCGGGCGCGTGGGTGTTCGGCGCCGCGCACGACATCGGGACGATGATGGTCGGGCGTCTGTT GATCGGCGTCGGCGTTTCGGTGTGCCTGGGCGGTGCGTTCAAGGCGCTCGCGCAGCATTTTCCGGTTGCCAGGCTGCCGC TTCTGAACGGCTTCGTGATGGCGGTGGGCGGCCTGGGCGGCGTCGTGGTCGGCTCGCCGCTCGAATGGCTGCTCGGCTTC GCCGGCTGGCGCGCGGTATGCGCGGGGCTCGGCGCGTTTACGGTGGCGGTTGCGGCCGCGTTGTGGGCGTTTGCCCCCGA TGTGCGGCAGAGCCGCCACGATGCGAGCGTCGCCGCGCAATTCGCGGGCACCTGGCGGATCGTCACGAACCGGACGTTCT GGAAAATCGCGTCGTTCTCGGTCGTCACGCAGGGCGTGTTCTACGCGATGCAGTCGCTGTGGGTCGGCGCGTACCTGCGC GATGTCAGCGGCTTCGCGCCGCGCGACGCGGCGGCGCTCGTGTCGGTGCTCGGCTTCGCGATGATGGCGGGCTGCGTCGG CTTCGGCGCGGCGGCGCGCGGGCTCGAGCGGCGCGGGGTGTCGCTGTACGCGTTCTGCGGGCTCGGGATGGCGCTGTTCG TCGCCACCCAGCTCGCGATCATGCTGCGTGCGCCGCTGCCCGCCGCGGTGCTCTGGTCGGCGTACGGCGTATTCGGCGGC GTCGGCATCCTGAGCTACGCGGTATTGGCCGAGTACTTCCCCGTGCAGTTGATCGGCCGCGCGAACACGACGCTCACGCT CGTCATCTTCGTGCTGATCTTCGGCTTTCAGATCGGCGTGGGCGCGGTGCTGTCGCATTGGCCGATGCATGCCGGACATT ATCCGGCTGCGGCGCACCTGAGCGCGTGGGGCGCGCTTGTCGCGCTGCAGATCGCGAGCGCGGTCTGGTACGCGCTGCCC GATCGTGCGCTCGACAAATCCGCCCGGCGCGCGGACTGA
Upstream 100 bases:
>100_bases GTCGGCGCGCAATCGACTATCATCGCCGGACGCCGTCACCTGGGTGACGGCGTTTTCGTTTGTGCGCGCCGAAGTCGGTT GGTCGGCCGGCGCTTTACCG
Downstream 100 bases:
>100_bases CGCGCGTCTCGCCCGCCGCGAGCGGAGCGCGGGCATCGACCGGCGCCGCGCGTCGCCGTGGCAGGCGCGGCGATGCCGCG CCACATCGCGCATTTGCGCG
Product: major facilitator family transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Carbohydrate Transport Membrane Protein; MFS Family Transporter; Facilitator Family Transporter; Transporter MFS Superfamily; Facilitator Superfamily Permease
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MIVMSPVQFRVFALFAIGYFVSYVFRGVNLGFAPLITRDLGLSAADLGLLTSLYFLGFACAQIPAGVLLDRYGPRRVSAA LLLVAAAGAWVFGAAHDIGTMMVGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAVGGLGGVVVGSPLEWLLGF AGWRAVCAGLGAFTVAVAAALWAFAPDVRQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR DVSGFAPRDAAALVSVLGFAMMAGCVGFGAAARGLERRGVSLYAFCGLGMALFVATQLAIMLRAPLPAAVLWSAYGVFGG VGILSYAVLAEYFPVQLIGRANTTLTLVIFVLIFGFQIGVGAVLSHWPMHAGHYPAAAHLSAWGALVALQIASAVWYALP DRALDKSARRAD
Sequences:
>Translated_412_residues MIVMSPVQFRVFALFAIGYFVSYVFRGVNLGFAPLITRDLGLSAADLGLLTSLYFLGFACAQIPAGVLLDRYGPRRVSAA LLLVAAAGAWVFGAAHDIGTMMVGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAVGGLGGVVVGSPLEWLLGF AGWRAVCAGLGAFTVAVAAALWAFAPDVRQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR DVSGFAPRDAAALVSVLGFAMMAGCVGFGAAARGLERRGVSLYAFCGLGMALFVATQLAIMLRAPLPAAVLWSAYGVFGG VGILSYAVLAEYFPVQLIGRANTTLTLVIFVLIFGFQIGVGAVLSHWPMHAGHYPAAAHLSAWGALVALQIASAVWYALP DRALDKSARRAD >Mature_412_residues MIVMSPVQFRVFALFAIGYFVSYVFRGVNLGFAPLITRDLGLSAADLGLLTSLYFLGFACAQIPAGVLLDRYGPRRVSAA LLLVAAAGAWVFGAAHDIGTMMVGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAVGGLGGVVVGSPLEWLLGF AGWRAVCAGLGAFTVAVAAALWAFAPDVRQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR DVSGFAPRDAAALVSVLGFAMMAGCVGFGAAARGLERRGVSLYAFCGLGMALFVATQLAIMLRAPLPAAVLWSAYGVFGG VGILSYAVLAEYFPVQLIGRANTTLTLVIFVLIFGFQIGVGAVLSHWPMHAGHYPAAAHLSAWGALVALQIASAVWYALP DRALDKSARRAD
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43304; Mature: 43304
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVMSPVQFRVFALFAIGYFVSYVFRGVNLGFAPLITRDLGLSAADLGLLTSLYFLGFAC CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AQIPAGVLLDRYGPRRVSAALLLVAAAGAWVFGAAHDIGTMMVGRLLIGVGVSVCLGGAF HHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KALAQHFPVARLPLLNGFVMAVGGLGGVVVGSPLEWLLGFAGWRAVCAGLGAFTVAVAAA HHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LWAFAPDVRQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR HHHHCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVSGFAPRDAAALVSVLGFAMMAGCVGFGAAARGLERRGVSLYAFCGLGMALFVATQLAI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH MLRAPLPAAVLWSAYGVFGGVGILSYAVLAEYFPVQLIGRANTTLTLVIFVLIFGFQIGV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHH GAVLSHWPMHAGHYPAAAHLSAWGALVALQIASAVWYALPDRALDKSARRAD HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCC >Mature Secondary Structure MIVMSPVQFRVFALFAIGYFVSYVFRGVNLGFAPLITRDLGLSAADLGLLTSLYFLGFAC CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AQIPAGVLLDRYGPRRVSAALLLVAAAGAWVFGAAHDIGTMMVGRLLIGVGVSVCLGGAF HHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KALAQHFPVARLPLLNGFVMAVGGLGGVVVGSPLEWLLGFAGWRAVCAGLGAFTVAVAAA HHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LWAFAPDVRQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR HHHHCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVSGFAPRDAAALVSVLGFAMMAGCVGFGAAARGLERRGVSLYAFCGLGMALFVATQLAI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH MLRAPLPAAVLWSAYGVFGGVGILSYAVLAEYFPVQLIGRANTTLTLVIFVLIFGFQIGV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHH GAVLSHWPMHAGHYPAAAHLSAWGALVALQIASAVWYALPDRALDKSARRAD HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA