| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83720732
Identifier: 83720732
GI number: 83720732
Start: 2340738
End: 2341691
Strand: Direct
Name: 83720732
Synonym: BTH_I2067
Alternate gene names: NA
Gene position: 2340738-2341691 (Clockwise)
Preceding gene: 83721450
Following gene: 83718857
Centisome position: 61.45
GC content: 66.46
Gene sequence:
>954_bases ATGGCATTCGATCCCAACTATCCACGCGATCTGGTCGGCTACGGCCGACATCCGGTGCAGGCGAACTGGCCGGGCCGCGC GCGCGTCGCGGTGCAGTTCGTGCTCAACTACGAGGAAGGCGGCGAGAACTGCGTGCTGCACGGCGATCCCGCGTCCGAGC AGTTCCTGTCCGAGATCGTCGGTGCAGCCGCGTATCCGGCGCGCCACATGAGCATGGAATCGATCTACGAATATGGCTCG CGCGCGGGCGTGTGGCGCATCCTGCGCGAGTTCGACAAGCGCGGGCTGCCGCTCACGGTATTCGGCGTCGGCATGGCGAT CGAGCGGCATCCGGAGCTCGCGCGCGCGTTCGTCGAGTTCGGCCACGAGATCGCGTGTCACGGCTGGCGCTGGATTCATT ATCAGGACATGACGCCCGAGCGCGAAGCCGAGCATATGAAGCTCGGGATGGAGGCGATCGAGCGCGTGACGGGCGTGCGC CCGCTCGGCTGGTATACGGGCCGCGACAGCCCGAACACGCACCGGCTCGTCGCCGAGTACGGCGGCTTTCTGTACGACTC CGACCACTACGGCGACGACCTGCCGTTCTGGATGGACGTCGAGGTGCCGGGCGGCGCGCGCGCGCCGCAACTGATCGTCC CCTATACGCTCGATGCGAACGACATGCGTTTCGCGACGCCGCAAGGCTTCAATACCGCCGATCATTTCTTCCACTATCTG CGCGATGCGTTCGACGTGCTGTACGAGGAGGGCGACGAGGCGCCGAAGATGATGTCGATCGGCATGCACTGCCGGCTGCT CGGCCGGCCGGGGCGCTTTCGCGCGCTGCAGCGTTTTCTCGATCACATCGAGCGGCACGATCGCGTATGGGTCGCGCGTC GCGTCGATATCGCGCGGCACTGGCGCGAGCATCATCCGTATCGGCCGCACGCTCGACGCGAGGGGGACGCATGA
Upstream 100 bases:
>100_bases CTACACTGGGCCATCCGTCGCATCGGCCGCGCGGCCCCGGTTTCCGGACGCCGCGCGGCCGATGCGAACCCGCTGACGCC GCATCACTACGCATCCAATC
Downstream 100 bases:
>100_bases TGAAGGCGATGCGCTACACGCTCGAACAATTGAACGCGATGTCGACGGAGGCGTTCGTCGCGGCGCTGTCCGGGATCTTC GAGCATTCGCCGTGGGTCGC
Product: polysaccharide deacetylase family protein
Products: NA
Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MAFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGS RAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEFGHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVR PLGWYTGRDSPNTHRLVAEYGGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYL RDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARHWREHHPYRPHARREGDA
Sequences:
>Translated_317_residues MAFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGS RAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEFGHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVR PLGWYTGRDSPNTHRLVAEYGGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYL RDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARHWREHHPYRPHARREGDA >Mature_316_residues AFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGSR AGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEFGHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVRP LGWYTGRDSPNTHRLVAEYGGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYLR DAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARHWREHHPYRPHARREGDA
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36702; Mature: 36571
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIV CCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH GAAAYPARHMSMESIYEYGSRAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEF HHHHCCHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHH GHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVRPLGWYTGRDSPNTHRLVAEY CCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH GGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYL CCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHH RDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARH HHHHHHHHHCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH WREHHPYRPHARREGDA HHHCCCCCCCCCCCCCC >Mature Secondary Structure AFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIV CCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH GAAAYPARHMSMESIYEYGSRAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEF HHHHCCHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHH GHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVRPLGWYTGRDSPNTHRLVAEY CCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH GGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYL CCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHH RDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARH HHHHHHHHHCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH WREHHPYRPHARREGDA HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA