| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yqiC [C]
Identifier: 83720710
GI number: 83720710
Start: 452747
End: 453352
Strand: Reverse
Name: yqiC [C]
Synonym: BTH_I0406
Alternate gene names: 83720710
Gene position: 453352-452747 (Counterclockwise)
Preceding gene: 83720647
Following gene: 83719860
Centisome position: 11.9
GC content: 62.05
Gene sequence:
>606_bases ATGGTGGTTGTCCCATCACTACTGCAATGCATGGCGGAACACCTACAGCAACTCGCATGCCATGTCGGCTCACGCCGGTC TCGACAGGCTTTCACGCAGATTTCCGGCGTCGGCGCGCGCTTGCGCGAACGCAAGCGCGCCTTGGCCGAACGGCCAACGC GGGCCCGGTTTGCTGGCGTGCTGAAAGGAAGGTTGCTAGAGTGCACGCACGTCCGGCGCATCGCGAACGCGGCTTCACGC GATCGAATGCCCGGAAAGCGGGCCTGCGGGCGCACCAATTTCGGTCATGCGCATTTCGTGGGCACGACTGCAACGGCTAT TGCACAAATTTTGTGCACCTGGAAGGGGAATACCATGAAGCAACCCAGCGACGTTTTCAACGGCCTGCAGGCGCGCATCG GCGACCTGCTGAAAAACTCGCCGGCCAAGGATGTCGAGCGCAACGTGAAGGCCATGCTCACGCAAGGCTTCTCGAAGCTC GATCTCGTCACCCGCGAAGAATTCGACACGCAGACGCAAGTGCTCGCGCGCACCCGCGCACGGCTCGAGGAGCTCGAGAA GCGCGTCGCCGAGCTCGAACAGAAACTGGCCGACGTTCAGTCGTGA
Upstream 100 bases:
>100_bases GTGATGCCCGAGACGCCGAGCGCCGAGAGCGCCTCGCGCGTCTCATCGAGCTTGAACGGCTTGATGATTGCGGTAATCAG TTTCATGAAGTCCTCTCGCT
Downstream 100 bases:
>100_bases CGGCCGCCGCCGCTCGCATTCGCTGAGCGGCTCCCCCCGCAGCTCGCGCCACGCCGGCCAAGCGCGCATCGAAACCATCC TCCGGACGCCGTGGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MVVVPSLLQCMAEHLQQLACHVGSRRSRQAFTQISGVGARLRERKRALAERPTRARFAGVLKGRLLECTHVRRIANAASR DRMPGKRACGRTNFGHAHFVGTTATAIAQILCTWKGNTMKQPSDVFNGLQARIGDLLKNSPAKDVERNVKAMLTQGFSKL DLVTREEFDTQTQVLARTRARLEELEKRVAELEQKLADVQS
Sequences:
>Translated_201_residues MVVVPSLLQCMAEHLQQLACHVGSRRSRQAFTQISGVGARLRERKRALAERPTRARFAGVLKGRLLECTHVRRIANAASR DRMPGKRACGRTNFGHAHFVGTTATAIAQILCTWKGNTMKQPSDVFNGLQARIGDLLKNSPAKDVERNVKAMLTQGFSKL DLVTREEFDTQTQVLARTRARLEELEKRVAELEQKLADVQS >Mature_201_residues MVVVPSLLQCMAEHLQQLACHVGSRRSRQAFTQISGVGARLRERKRALAERPTRARFAGVLKGRLLECTHVRRIANAASR DRMPGKRACGRTNFGHAHFVGTTATAIAQILCTWKGNTMKQPSDVFNGLQARIGDLLKNSPAKDVERNVKAMLTQGFSKL DLVTREEFDTQTQVLARTRARLEELEKRVAELEQKLADVQS
Specific function: Unknown
COG id: COG2960
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22446; Mature: 22446
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVVPSLLQCMAEHLQQLACHVGSRRSRQAFTQISGVGARLRERKRALAERPTRARFAGV CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LKGRLLECTHVRRIANAASRDRMPGKRACGRTNFGHAHFVGTTATAIAQILCTWKGNTMK HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QPSDVFNGLQARIGDLLKNSPAKDVERNVKAMLTQGFSKLDLVTREEFDTQTQVLARTRA CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH RLEELEKRVAELEQKLADVQS HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVVVPSLLQCMAEHLQQLACHVGSRRSRQAFTQISGVGARLRERKRALAERPTRARFAGV CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LKGRLLECTHVRRIANAASRDRMPGKRACGRTNFGHAHFVGTTATAIAQILCTWKGNTMK HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QPSDVFNGLQARIGDLLKNSPAKDVERNVKAMLTQGFSKLDLVTREEFDTQTQVLARTRA CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH RLEELEKRVAELEQKLADVQS HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA