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The map label for this gene is yifB [H]

Identifier: 83719860

GI number: 83719860

Start: 451026

End: 452606

Strand: Reverse

Name: yifB [H]

Synonym: BTH_I0405

Alternate gene names: 83719860

Gene position: 452606-451026 (Counterclockwise)

Preceding gene: 83720710

Following gene: 83720311

Centisome position: 11.88

GC content: 73.12

Gene sequence:

>1581_bases
ATGTCGCTTGCCGTGGTGCGCAGCCGCGCGCCCGCTGCCGGCCGCGCGCCGGAAGTCACCGTCGAAGTCCATCTCGCCAA
CGGGCTGCCGTCGTTCTCGATCGTCGGGCTGCCCGATCTCGAAGTGCGCGAAAGCCGTGAGCGCGTGCGGGCCGCGCTGC
AGAACTGCGGCTTCGAATTCCCCGTGCGGCGCATCACCGTCAACCTCGCGCCCGCCGACTTGCCGAAGGAATCCGGGCGC
TTCGATTTGCCGATCGCGCTCGGCATCCTCGCCGCGAGCGGTCAGCTCCCGGCGGGCGCGCTCGACGGCCGCGAGTTCGC
GGGCGAGCTGTCGCTGACGGGCGCGCTTCGGCCGATGCGCGGTGCGTTCGCGATGGCGTGCGGCGCGGCCCGCGGCCAGC
AGGCCGACGAAGACGGCTCGTCCGCGGATGGCGGAGCGCCGCTCGCGGTCATGACAGCGGTGGCGGAGCTTTACCTGCCG
CTGCCGAGCGCGGCCGAAGCGGCGCTCGTGCCGGGGGTGACCGTGTACGGCGCGGCCGATCTGCCCGCGCTGTGCGCGCA
CCTCGCCGACGCGCCGGACGGGCGGCTCGCGCCCGTCGCCGCGCCCCGTCTCGACGACCTCCCTGCCGCGTCCGCGCCCG
ACCTCGCCGACGTGATCGGCCAGACGGGCGCGAAGCGCGCGCTCGAAGTCGCGGCGGCGGGCGGCCACCACATGCTGATG
ATCGGCCCGCCGGGCGCCGGCAAATCCATGCTCGCCGCACGCCTGCCGGCCCTCTTGCCGCCGCTCACCGACGACGAGGC
GCTGACGTCGGCCGCGATCCTGTCGTCGAGCCGGGCGGGCTTCTCGCCCGCTCAGTGGCGGCGGCGCCCGTTTCGCACGC
CGCATCACTCGTCGAGCTCGGCTGCGCTCGTCGGCGGCCGCAATCCGCCGCAGCCGGGCGAGATCACGCTCGCGCACCTG
GGCGTGCTGTTCCTCGACGAGTTGCCGGAATTCGACCGGCATGTGCTCGAAACGCTGCGCGAGCCGCTCGAAGCCGGCCG
CATCACGATCTCGCGCGCTGCGCTGCAAGCGGATTTCCCGGCCGCGTGCCAGTTGATCGCCGCGATGAATCCGTGCCCGT
GCGGCTGGCGGGGCGACCCCGGCGGCCGCTGCCGCTGCTCGCCAGACATCGCCGCACGCTATCTGCGCAAGCTGTCCGGG
CCGCTCCTCGACCGGATCGACATCCAGATCGAGATTCCCGCACTCACGCCCGCCGAGCTGGCCGAGCGGCCCGCGACCGC
CGGCGAATCGAGCAAGACCGTGGCCGCGCGCGTCGCGCTCGCGCGCGAACGGCAATTCGCGCGACAGCGCAAGACCAACC
ACATGCTGACGGGCCGCGAGACCGATGCGTTCTGCCGCCCGGACAGCACGGGCGAGACGCTGCTGCGCGACGCGGGCGAG
CGATTCCGATGGTCGGCGCGTGCGTACTACCGGGTGCTGAAGGTCGCGCGAACGATTGCCGATCTCGCGGGCGACGATGC
GCCGAGCGCCGCGCATATCGCCGAGGCGATCCGGTATCGAAGGGTGTTTTCGCCGGTTTGA

Upstream 100 bases:

>100_bases
AGCTCGCGCCACGCCGGCCAAGCGCGCATCGAAACCATCCTCCGGACGCCGTGGGCGGCGCGAATCGCGCCGCGCGGCCC
GGTTCACGCGGAGTCGAATC

Downstream 100 bases:

>100_bases
GCGCACGTCGATCCAAGAATCCGCCGACGGGTGGAAAAGCGGAACCCCGAAGGTGGCGGCGCGGCGTGCGATGCCGCGCC
CAATAATGAGCGGCGACACG

Product: Mg chelatase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSLAVVRSRAPAAGRAPEVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGR
FDLPIALGILAASGQLPAGALDGREFAGELSLTGALRPMRGAFAMACGAARGQQADEDGSSADGGAPLAVMTAVAELYLP
LPSAAEAALVPGVTVYGAADLPALCAHLADAPDGRLAPVAAPRLDDLPAASAPDLADVIGQTGAKRALEVAAAGGHHMLM
IGPPGAGKSMLAARLPALLPPLTDDEALTSAAILSSSRAGFSPAQWRRRPFRTPHHSSSSAALVGGRNPPQPGEITLAHL
GVLFLDELPEFDRHVLETLREPLEAGRITISRAALQADFPAACQLIAAMNPCPCGWRGDPGGRCRCSPDIAARYLRKLSG
PLLDRIDIQIEIPALTPAELAERPATAGESSKTVAARVALARERQFARQRKTNHMLTGRETDAFCRPDSTGETLLRDAGE
RFRWSARAYYRVLKVARTIADLAGDDAPSAAHIAEAIRYRRVFSPV

Sequences:

>Translated_526_residues
MSLAVVRSRAPAAGRAPEVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGR
FDLPIALGILAASGQLPAGALDGREFAGELSLTGALRPMRGAFAMACGAARGQQADEDGSSADGGAPLAVMTAVAELYLP
LPSAAEAALVPGVTVYGAADLPALCAHLADAPDGRLAPVAAPRLDDLPAASAPDLADVIGQTGAKRALEVAAAGGHHMLM
IGPPGAGKSMLAARLPALLPPLTDDEALTSAAILSSSRAGFSPAQWRRRPFRTPHHSSSSAALVGGRNPPQPGEITLAHL
GVLFLDELPEFDRHVLETLREPLEAGRITISRAALQADFPAACQLIAAMNPCPCGWRGDPGGRCRCSPDIAARYLRKLSG
PLLDRIDIQIEIPALTPAELAERPATAGESSKTVAARVALARERQFARQRKTNHMLTGRETDAFCRPDSTGETLLRDAGE
RFRWSARAYYRVLKVARTIADLAGDDAPSAAHIAEAIRYRRVFSPV
>Mature_525_residues
SLAVVRSRAPAAGRAPEVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGRF
DLPIALGILAASGQLPAGALDGREFAGELSLTGALRPMRGAFAMACGAARGQQADEDGSSADGGAPLAVMTAVAELYLPL
PSAAEAALVPGVTVYGAADLPALCAHLADAPDGRLAPVAAPRLDDLPAASAPDLADVIGQTGAKRALEVAAAGGHHMLMI
GPPGAGKSMLAARLPALLPPLTDDEALTSAAILSSSRAGFSPAQWRRRPFRTPHHSSSSAALVGGRNPPQPGEITLAHLG
VLFLDELPEFDRHVLETLREPLEAGRITISRAALQADFPAACQLIAAMNPCPCGWRGDPGGRCRCSPDIAARYLRKLSGP
LLDRIDIQIEIPALTPAELAERPATAGESSKTVAARVALARERQFARQRKTNHMLTGRETDAFCRPDSTGETLLRDAGER
FRWSARAYYRVLKVARTIADLAGDDAPSAAHIAEAIRYRRVFSPV

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=522, Percent_Identity=47.5095785440613, Blast_Score=449, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 55355; Mature: 55224

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50051 MCM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAVVRSRAPAAGRAPEVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEF
CCCEEEECCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC
PVRRITVNLAPADLPKESGRFDLPIALGILAASGQLPAGALDGREFAGELSLTGALRPMR
CEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCEEEHHCCCHHH
GAFAMACGAARGQQADEDGSSADGGAPLAVMTAVAELYLPLPSAAEAALVPGVTVYGAAD
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCC
LPALCAHLADAPDGRLAPVAAPRLDDLPAASAPDLADVIGQTGAKRALEVAAAGGHHMLM
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEE
IGPPGAGKSMLAARLPALLPPLTDDEALTSAAILSSSRAGFSPAQWRRRPFRTPHHSSSS
EECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCC
AALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLETLREPLEAGRITISRAALQADFP
EEEECCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEHHHHHCCCH
AACQLIAAMNPCPCGWRGDPGGRCRCSPDIAARYLRKLSGPLLDRIDIQIEIPALTPAEL
HHHHHHHHCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHH
AERPATAGESSKTVAARVALARERQFARQRKTNHMLTGRETDAFCRPDSTGETLLRDAGE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RFRWSARAYYRVLKVARTIADLAGDDAPSAAHIAEAIRYRRVFSPV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLAVVRSRAPAAGRAPEVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEF
CCEEEECCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC
PVRRITVNLAPADLPKESGRFDLPIALGILAASGQLPAGALDGREFAGELSLTGALRPMR
CEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCEEEHHCCCHHH
GAFAMACGAARGQQADEDGSSADGGAPLAVMTAVAELYLPLPSAAEAALVPGVTVYGAAD
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCC
LPALCAHLADAPDGRLAPVAAPRLDDLPAASAPDLADVIGQTGAKRALEVAAAGGHHMLM
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEE
IGPPGAGKSMLAARLPALLPPLTDDEALTSAAILSSSRAGFSPAQWRRRPFRTPHHSSSS
EECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCC
AALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLETLREPLEAGRITISRAALQADFP
EEEECCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEHHHHHCCCH
AACQLIAAMNPCPCGWRGDPGGRCRCSPDIAARYLRKLSGPLLDRIDIQIEIPALTPAEL
HHHHHHHHCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHH
AERPATAGESSKTVAARVALARERQFARQRKTNHMLTGRETDAFCRPDSTGETLLRDAGE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RFRWSARAYYRVLKVARTIADLAGDDAPSAAHIAEAIRYRRVFSPV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]