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The map label for this gene is ctpA [H]

Identifier: 83720556

GI number: 83720556

Start: 461792

End: 463357

Strand: Reverse

Name: ctpA [H]

Synonym: BTH_I0415

Alternate gene names: 83720556

Gene position: 463357-461792 (Counterclockwise)

Preceding gene: 83719819

Following gene: 83720647

Centisome position: 12.16

GC content: 65.39

Gene sequence:

>1566_bases
ATGCGTATGAAATTGAAGAACATCGGCCTGATTGCCGCGGGCCTCGCGACTGGCGTCTTCGCGACGCTGCAAATCTCCGC
GTCGGCCCAGCAGGCCGTCACGACGGCCGCCGCGCCGCTGCCGCTCGATCAACTGCGGCTCTTCGCGGAAGTGTTCGGGC
AGATCAAGCGCGAATACGTCGAGCCCGTCGACGACAAGAAGCTCTTGACCGCAGCGATCAAGGGCATGGTATCGAGCCTC
GACCCGCATTCGTCGTATCTCGACAAGACCGATTACCAGGAACTGCAGGAGCAGACGAAGGGCCGCTTCGCCGGCCTCGG
CATCGAGATCTCGCAGGAAGACGGCCTCGTCAAGGTGATCTCGCCGATCGAGGACACGCCCGCGTTTCGCGCCGGCATCC
GTCCGGGCGACCTGATCACCCGCATCAACGATCGCCCTGTGCGCGGCATGACGCTCGACAAGGCCGTCAAGCAGATGCGC
GGCGAGCCCGGCACGAAGGTCACGTTGACGATCTTCCGCAAGAGCGACGACCGCACGTTCCCCGTCACGGTCACCCGCGC
GGTGATCCGCGTGCAGAGCGTGAAGATGAAGCTGCTCGATCCGGGCTACGCGTACATCCGCATCACGAGCTTCCAGGAGC
GCACGACGCCCGATCTCGCCGCGAAGCTGCAGGACATCGCGCGCCAGCAGCCGAAGCTGAAGGGCCTGATCCTCGATCTG
CGCAACAACGGCGGCGGCCTGCTGCAAAGCGCCGTCGGCGTCGCGGGCGCGTTCCTGCCGCCGGATTCCGTCGTCGTGTC
GACGAACGGCCAGATCCCCGATTCGAAGCAGGTCTACCGCGACAACTACGAGAACTACCGCCTGCCGTCGTTCGACTCCG
ATCCGCTGAAGAACCTGCCCGCCGTCTTCAAGACGGTGCCGATGGTCGTGCTGACGAACGCTTATTCGGCGTCGGCCTCG
GAAATCGTTGCGGGCGCGCTGCAGGATTCGCACCGCGCGCTGATCATGGGCAAGGCGACGTTCGGCAAGGGCTCGGTGCA
GACGGTGCGTCCGATGACGGCCGATTCCGCGCTGCGCCTGACGACCGCGTACTACTACACGCCGAGCGGCCGCTCGATCC
AGAACAAGGGCATCCTGCCCGACATTCCGGTCGATCAGTACGCGGACGGCGATCCGGACGACGTGCTCGTCACGCGCGAG
GTCGACTACACGAACCACCTCGCGAACACGCAGGACCCGAACGAGAAGAAGGAGCTCGAGGAACGCGAGCAGCGCCGGAT
GGAGCAGTTGCGCCTTCTCGAAGAGCAGAACGACAAGAAGACGCCCGAGCAACGTCAGAAGGATCGCGAACGCAAGCCGG
TCGAGTTCGGCAGCGCCGACGATTTCATGATGCAGCAGGCACTCAACAAGCTCGAAGGCAAGCCGGTCGTGCAGTCGAAG
ATGATCGCCGCCGACAGCACCGCGAAGAGCCCTGCCGCCAAGGCGAGCGCCGCCCCGGCGCCGAAGGGCGCGGCTGCGAA
GCCTGCGTCGGCTGCGAAGCCCGCGTCGGCGCCGCAACCGCAGTAA

Upstream 100 bases:

>100_bases
CGATCCACAAGGCGTCCGGACGAACAGTTATACTTGACCGTCCTGTGACCGTCCCGTTGCTCCCGCGACAGCCACGCGCT
TTCCGACCGCACCAGACTCT

Downstream 100 bases:

>100_bases
GCGCACGGCGCCACGCACGGGCCATCGCGGCACGCCGCCGCGATGGCCCGTTTTCTTTGCGCGCCTAGAATAATATTCGA
GACTGTTTTACCGCCTTGCG

Product: carboxy-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSL
DPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMR
GEPGTKVTLTIFRKSDDRTFPVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPKLKGLILDL
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDNYENYRLPSFDSDPLKNLPAVFKTVPMVVLTNAYSASAS
EIVAGALQDSHRALIMGKATFGKGSVQTVRPMTADSALRLTTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTRE
VDYTNHLANTQDPNEKKELEEREQRRMEQLRLLEEQNDKKTPEQRQKDRERKPVEFGSADDFMMQQALNKLEGKPVVQSK
MIAADSTAKSPAAKASAAPAPKGAAAKPASAAKPASAPQPQ

Sequences:

>Translated_521_residues
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSL
DPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMR
GEPGTKVTLTIFRKSDDRTFPVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPKLKGLILDL
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDNYENYRLPSFDSDPLKNLPAVFKTVPMVVLTNAYSASAS
EIVAGALQDSHRALIMGKATFGKGSVQTVRPMTADSALRLTTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTRE
VDYTNHLANTQDPNEKKELEEREQRRMEQLRLLEEQNDKKTPEQRQKDRERKPVEFGSADDFMMQQALNKLEGKPVVQSK
MIAADSTAKSPAAKASAAPAPKGAAAKPASAAKPASAPQPQ
>Mature_521_residues
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSL
DPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMR
GEPGTKVTLTIFRKSDDRTFPVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPKLKGLILDL
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDNYENYRLPSFDSDPLKNLPAVFKTVPMVVLTNAYSASAS
EIVAGALQDSHRALIMGKATFGKGSVQTVRPMTADSALRLTTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTRE
VDYTNHLANTQDPNEKKELEEREQRRMEQLRLLEEQNDKKTPEQRQKDRERKPVEFGSADDFMMQQALNKLEGKPVVQSK
MIAADSTAKSPAAKASAAPAPKGAAAKPASAAKPASAPQPQ

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=32.4483775811209, Blast_Score=135, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 56875; Mature: 56875

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYV
CCEEECCCCCHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EPVDDKKLLTAAIKGMVSSLDPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVI
CCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCEEECCEEECCCCCEEEEE
SPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTF
CCCCCCCHHHCCCCCCHHHEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCC
PVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPKLKGLILDL
CHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDNYENYRLPSFDSDPLKNLP
ECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHH
AVFKTVPMVVLTNAYSASASEIVAGALQDSHRALIMGKATFGKGSVQTVRPMTADSALRL
HHHHHHCHHEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCCCCCCCEEE
TTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTREVDYTNHLANTQDPNEKKELE
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHH
EREQRRMEQLRLLEEQNDKKTPEQRQKDRERKPVEFGSADDFMMQQALNKLEGKPVVQSK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
MIAADSTAKSPAAKASAAPAPKGAAAKPASAAKPASAPQPQ
HEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMKLKNIGLIAAGLATGVFATLQISASAQQAVTTAAAPLPLDQLRLFAEVFGQIKREYV
CCEEECCCCCHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EPVDDKKLLTAAIKGMVSSLDPHSSYLDKTDYQELQEQTKGRFAGLGIEISQEDGLVKVI
CCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCEEECCEEECCCCCEEEEE
SPIEDTPAFRAGIRPGDLITRINDRPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTF
CCCCCCCHHHCCCCCCHHHEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCC
PVTVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPKLKGLILDL
CHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
RNNGGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDNYENYRLPSFDSDPLKNLP
ECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHH
AVFKTVPMVVLTNAYSASASEIVAGALQDSHRALIMGKATFGKGSVQTVRPMTADSALRL
HHHHHHCHHEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCCCCCCCEEE
TTAYYYTPSGRSIQNKGILPDIPVDQYADGDPDDVLVTREVDYTNHLANTQDPNEKKELE
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHH
EREQRRMEQLRLLEEQNDKKTPEQRQKDRERKPVEFGSADDFMMQQALNKLEGKPVVQSK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
MIAADSTAKSPAAKASAAPAPKGAAAKPASAAKPASAPQPQ
HEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]