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The map label for this gene is glpQ [H]

Identifier: 83720484

GI number: 83720484

Start: 1608668

End: 1609804

Strand: Reverse

Name: glpQ [H]

Synonym: BTH_I1425

Alternate gene names: 83720484

Gene position: 1609804-1608668 (Counterclockwise)

Preceding gene: 83721610

Following gene: 83719761

Centisome position: 42.26

GC content: 68.34

Gene sequence:

>1137_bases
ATGTTCTTCAAGCGCTCGTTCGCTTTCTCCCCGGTCGCGCTCGCGTGCGCGGCGACGCTCGCGCTCGCCGCCTGCGGCGG
CGACGACTCCGACTACACGCAGCCGATCTCCGCGAAGGTGCAGGTGGTCGGCCATCGCGGCGCGAGCGCGCTGCGCCCCG
AGCACACGCTCGCGTCGTACCGCAAGGCGATCGAGGACGGCGCGGACGTGATCGAGCCGGACCTCGTCGCGACGCGTGAC
GGCGTGCTCGTCGCGCGCCACGAGAACGAGATCTCGGGCACGACGAACGTGTCGGCGCTGCCGCAGTTCGCGAGTCGCAG
GACGACGAAGACGATCGACGGCGCGCAGCTCACCGGCTGGTTCACCGAGGACTTCACGCTCGCCGAGCTGAAGACGCTGC
GCGCGCGCGAGCGCATCCCGCAGATCCGCCCGGCGAACACCGCGTACAACGATCAGTTCGAGATCCCGACGTTCGACGAG
ATCGTCGCGCTTGCGAAGCAGATGTCCGCGCAGGTCGGCCGCACGATCCACCTCTATCCGGAAACGAAGCATCCGACCTA
CTTCCAGTCGATCGGCCTGCCGCTCGAAGACCGCCTCGTCGATGCGCTGCGCAAGGACCCGTACACCGCGCGGGACGCAA
CCGTCTACATTCAGTCGTTCGAAGTCGCGAACCTGAAGGCGATTCGCGCGCGGATCGGCTCGAGCCAGCCGAACTGGAAG
CTCGTGCAGTTGATGGACGAGCCGAAGCAGCGGCCGTACGACTTCGTGAAGGCGGGCGACCCGCGCACGTACGGCGACCT
GTCGACGCAAAGCGGAATGCGCGAGATCGCGACATATGCGAACGGCGTCGGGCCGTACAAGACGTCGATCATCCCGGTCG
GCCCGGACGGCGCACTGCAGCAGCCGACCCGCTACGTGCGCTTCGCGCACGAGGCGGGGCTCGTCGTGCATCCGTATACG
TTCCGGCCCGAGAACAACTTCCTGCCGGCGCCGCTGAAGGACGGCGGCGCGGCGAGCGCGCGCAACACGGCGGGATCGGT
GCGCGAGATCCAGGCGTATCTGCGTGCGGGCATCGACGGCTTCTTCACCGACGATCCCGCGGTCGGCCGCACCGCGGTCG
ACACGTTCCGCCGGTAA

Upstream 100 bases:

>100_bases
CGCTGCGACGATCGCATCCCGTCCGGCCGCGCGTGGAATCCGCCGCGCCGCCGCAACCTCTTTTTCCCCTGGCTCGCTTT
CGTTTCACAAGATCGACGAC

Downstream 100 bases:

>100_bases
GTTCGTCTCGCATGCGGGCCGCGCACCGCCGCGGCCCGCGCGGAAACAAGATTCGCCTGTCAGCAACCGGCAGGAAGGCG
GCTCACAACACGCTTACAAT

Product: glycerophosphoryl diester phosphodiesterase family protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MFFKRSFAFSPVALACAATLALAACGGDDSDYTQPISAKVQVVGHRGASALRPEHTLASYRKAIEDGADVIEPDLVATRD
GVLVARHENEISGTTNVSALPQFASRRTTKTIDGAQLTGWFTEDFTLAELKTLRARERIPQIRPANTAYNDQFEIPTFDE
IVALAKQMSAQVGRTIHLYPETKHPTYFQSIGLPLEDRLVDALRKDPYTARDATVYIQSFEVANLKAIRARIGSSQPNWK
LVQLMDEPKQRPYDFVKAGDPRTYGDLSTQSGMREIATYANGVGPYKTSIIPVGPDGALQQPTRYVRFAHEAGLVVHPYT
FRPENNFLPAPLKDGGAASARNTAGSVREIQAYLRAGIDGFFTDDPAVGRTAVDTFRR

Sequences:

>Translated_378_residues
MFFKRSFAFSPVALACAATLALAACGGDDSDYTQPISAKVQVVGHRGASALRPEHTLASYRKAIEDGADVIEPDLVATRD
GVLVARHENEISGTTNVSALPQFASRRTTKTIDGAQLTGWFTEDFTLAELKTLRARERIPQIRPANTAYNDQFEIPTFDE
IVALAKQMSAQVGRTIHLYPETKHPTYFQSIGLPLEDRLVDALRKDPYTARDATVYIQSFEVANLKAIRARIGSSQPNWK
LVQLMDEPKQRPYDFVKAGDPRTYGDLSTQSGMREIATYANGVGPYKTSIIPVGPDGALQQPTRYVRFAHEAGLVVHPYT
FRPENNFLPAPLKDGGAASARNTAGSVREIQAYLRAGIDGFFTDDPAVGRTAVDTFRR
>Mature_378_residues
MFFKRSFAFSPVALACAATLALAACGGDDSDYTQPISAKVQVVGHRGASALRPEHTLASYRKAIEDGADVIEPDLVATRD
GVLVARHENEISGTTNVSALPQFASRRTTKTIDGAQLTGWFTEDFTLAELKTLRARERIPQIRPANTAYNDQFEIPTFDE
IVALAKQMSAQVGRTIHLYPETKHPTYFQSIGLPLEDRLVDALRKDPYTARDATVYIQSFEVANLKAIRARIGSSQPNWK
LVQLMDEPKQRPYDFVKAGDPRTYGDLSTQSGMREIATYANGVGPYKTSIIPVGPDGALQQPTRYVRFAHEAGLVVHPYT
FRPENNFLPAPLKDGGAASARNTAGSVREIQAYLRAGIDGFFTDDPAVGRTAVDTFRR

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI284055242, Length=103, Percent_Identity=39.8058252427184, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI21361649, Length=103, Percent_Identity=39.8058252427184, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI284055245, Length=103, Percent_Identity=39.8058252427184, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI284055240, Length=103, Percent_Identity=39.8058252427184, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1788572, Length=342, Percent_Identity=30.7017543859649, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 41540; Mature: 41540

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKRSFAFSPVALACAATLALAACGGDDSDYTQPISAKVQVVGHRGASALRPEHTLASY
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
RKAIEDGADVIEPDLVATRDGVLVARHENEISGTTNVSALPQFASRRTTKTIDGAQLTGW
HHHHHCCHHHCCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEE
FTEDFTLAELKTLRARERIPQIRPANTAYNDQFEIPTFDEIVALAKQMSAQVGRTIHLYP
ECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEE
ETKHPTYFQSIGLPLEDRLVDALRKDPYTARDATVYIQSFEVANLKAIRARIGSSQPNWK
CCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCEE
LVQLMDEPKQRPYDFVKAGDPRTYGDLSTQSGMREIATYANGVGPYKTSIIPVGPDGALQ
EEEEHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
QPTRYVRFAHEAGLVVHPYTFRPENNFLPAPLKDGGAASARNTAGSVREIQAYLRAGIDG
CCHHHHHHHHHCCEEEECEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
FFTDDPAVGRTAVDTFRR
CCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MFFKRSFAFSPVALACAATLALAACGGDDSDYTQPISAKVQVVGHRGASALRPEHTLASY
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
RKAIEDGADVIEPDLVATRDGVLVARHENEISGTTNVSALPQFASRRTTKTIDGAQLTGW
HHHHHCCHHHCCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEE
FTEDFTLAELKTLRARERIPQIRPANTAYNDQFEIPTFDEIVALAKQMSAQVGRTIHLYP
ECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEE
ETKHPTYFQSIGLPLEDRLVDALRKDPYTARDATVYIQSFEVANLKAIRARIGSSQPNWK
CCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCEE
LVQLMDEPKQRPYDFVKAGDPRTYGDLSTQSGMREIATYANGVGPYKTSIIPVGPDGALQ
EEEEHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
QPTRYVRFAHEAGLVVHPYTFRPENNFLPAPLKDGGAASARNTAGSVREIQAYLRAGIDG
CCHHHHHHHHHCCEEEECEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
FFTDDPAVGRTAVDTFRR
CCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]