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The map label for this gene is rdgB [C]

Identifier: 83720085

GI number: 83720085

Start: 1783314

End: 1783940

Strand: Reverse

Name: rdgB [C]

Synonym: BTH_I1583

Alternate gene names: 83720085

Gene position: 1783940-1783314 (Counterclockwise)

Preceding gene: 83719437

Following gene: 83720503

Centisome position: 46.83

GC content: 72.57

Gene sequence:

>627_bases
ATGTCGCACGCATCGACCGAGGCCGTGGCCTCGCGCATCGTCCTCGCATCGAACAACGCCGGCAAGCTGCGCGAGTTCGC
CGCCCTCTTCTCGACGGCCGGCATCGATGTCGTGCCGCAAGGCGAGCTCGGCGTGTCCGAGGCCGATGAGCCGCACGTGA
CGTTCGTCGAGAACGCGCTCGCGAAGGCGCGCCACGCGTCGCGCGCGACGGGCCTGCCCGCCGTCGCCGACGATTCCGGC
CTGTGCGTGCCCGCGCTGCACGGCGCGCCGGGCGTCTACTCGGCGCGCTACGCGCAGCGCGCCGGCCGCGAGAAGAGCGA
CGCGGCGAACAACGCGTATCTCGTCGAGCAACTGCGCGGCGTCACCGATCGGCGCGCGTACTACTGCTGCGTGCTCGCGC
TCGTGCGCCATGCGGACGATCCCGAGCCGATCATCGCCGAAGGCCGCTGGGCGGGCGAGATCGTCGACGCGCCGCGCGGC
GCGCACGGCTTCGGCTACGATCCGCACTTCTTCGTGCCGGCGCTCGGCGCGACGGCGGCCGAGCTCGATCCGGCCGCGAA
GAACGCGGCGAGCCATCGCGCGCTCGCACTGAAGGCGCTCGTCGCGCGGCTCGGAGAGATTCGATGA

Upstream 100 bases:

>100_bases
TGCCGTTCTCGCGCGCCGAGATGAACGCGCTCCTCGACCTCGCGCAGGCCGGCATCGGCGAGCTCGTGCGGCTGCAGCGC
GCCGCGCTGGAGGCCTGACG

Downstream 100 bases:

>100_bases
GCGACGCGGCAACCAACGGCGCGCGCGTCGTCGCGACATTCGCCGCGCCCGGCAAGATCCGGCTCGCGTCGCTGCCGCCG
CTCGCACTGTACGTTCACTT

Product: deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSHASTEAVASRIVLASNNAGKLREFAALFSTAGIDVVPQGELGVSEADEPHVTFVENALAKARHASRATGLPAVADDSG
LCVPALHGAPGVYSARYAQRAGREKSDAANNAYLVEQLRGVTDRRAYYCCVLALVRHADDPEPIIAEGRWAGEIVDAPRG
AHGFGYDPHFFVPALGATAAELDPAAKNAASHRALALKALVARLGEIR

Sequences:

>Translated_208_residues
MSHASTEAVASRIVLASNNAGKLREFAALFSTAGIDVVPQGELGVSEADEPHVTFVENALAKARHASRATGLPAVADDSG
LCVPALHGAPGVYSARYAQRAGREKSDAANNAYLVEQLRGVTDRRAYYCCVLALVRHADDPEPIIAEGRWAGEIVDAPRG
AHGFGYDPHFFVPALGATAAELDPAAKNAASHRALALKALVARLGEIR
>Mature_207_residues
SHASTEAVASRIVLASNNAGKLREFAALFSTAGIDVVPQGELGVSEADEPHVTFVENALAKARHASRATGLPAVADDSGL
CVPALHGAPGVYSARYAQRAGREKSDAANNAYLVEQLRGVTDRRAYYCCVLALVRHADDPEPIIAEGRWAGEIVDAPRGA
HGFGYDPHFFVPALGATAAELDPAAKNAASHRALALKALVARLGEIR

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Homo sapiens, GI15626999, Length=201, Percent_Identity=32.3383084577114, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI31657144, Length=152, Percent_Identity=35.5263157894737, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1789324, Length=196, Percent_Identity=51.530612244898, Blast_Score=199, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17556833, Length=192, Percent_Identity=32.2916666666667, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19920712, Length=192, Percent_Identity=29.6875, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 21818; Mature: 21686

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHASTEAVASRIVLASNNAGKLREFAALFSTAGIDVVPQGELGVSEADEPHVTFVENAL
CCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHH
AKARHASRATGLPAVADDSGLCVPALHGAPGVYSARYAQRAGREKSDAANNAYLVEQLRG
HHHHHHHHHCCCCCEECCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHC
VTDRRAYYCCVLALVRHADDPEPIIAEGRWAGEIVDAPRGAHGFGYDPHFFVPALGATAA
CHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCHH
ELDPAAKNAASHRALALKALVARLGEIR
HCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHASTEAVASRIVLASNNAGKLREFAALFSTAGIDVVPQGELGVSEADEPHVTFVENAL
CCCHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHH
AKARHASRATGLPAVADDSGLCVPALHGAPGVYSARYAQRAGREKSDAANNAYLVEQLRG
HHHHHHHHHCCCCCEECCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHC
VTDRRAYYCCVLALVRHADDPEPIIAEGRWAGEIVDAPRGAHGFGYDPHFFVPALGATAA
CHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCHH
ELDPAAKNAASHRALALKALVARLGEIR
HCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA