Click here to switch to the map view.

The map label for this gene is yggW [H]

Identifier: 83720503

GI number: 83720503

Start: 1782100

End: 1783317

Strand: Reverse

Name: yggW [H]

Synonym: BTH_I1582

Alternate gene names: 83720503

Gene position: 1783317-1782100 (Counterclockwise)

Preceding gene: 83720085

Following gene: 83721281

Centisome position: 46.82

GC content: 67.57

Gene sequence:

>1218_bases
ATGAGCGACGCGGCAACCAACGGCGCGCGCGTCGTCGCGACATTCGCCGCGCCCGGCAAGATCCGGCTCGCGTCGCTGCC
GCCGCTCGCACTGTACGTTCACTTCCCGTGGTGCGTGCGCAAGTGCCCGTACTGCGACTTCAATTCGCACGAATGGAAGG
ACGGCGGCGCGCTGCCCGAGCACGATTATCTCGACGCGCTGCGCGCCGATCTCGAACATGCGCTGCCGCTCGTCTGGGGA
CGCCAGGTGCACACGGTGTTCATCGGCGGCGGCACGCCGAGCCTGCTGTCGGCGGCGGGGCTCGACCGGCTGCTGTCCGA
CGTGCGCGCGCTACTGCCGCTCGACGCGGACGCCGAGATCACGCTCGAGGCGAACCCCGGCACGTTCGAGGCGGCGAAAT
TCGCGCAATTCCGCGCGAGCGGCGTCAATCGTCTGTCGATCGGCATCCAGAGCTTCAACGAAGCGCATCTGAAGGCGCTC
GGGCGAATCCACGACGCCGCGCAGGCGCGCGCCGCGGTCGAGATCGCCGCGCGCACGTTCGAGAACTTCAATCTCGACCT
GATGTTCGCGCTGCCGAACCAGACGCTCGACGAATGCCGCGCGGATCTCGAGACCGCGCTCACGTTCGCGCCGCCGCATC
TGTCGCTTTATCACCTGACGCTCGAGCCGAATACGTACTTCGCGAAATTTCCGCCCGCCGTACCGGACGACGACGCGTCG
GCCGACATGCAGGACTGGTTGCACGAGCGCACCGCGCAGGCGAGCTACGCGCGCTACGAGGTGTCGGCTTACGCGAAGCC
GCATCGGCAGAGCAAGCACAACCTCAACTACTGGTGCTTCGGCGACTATCTCGGGATCGGCGCGGGCGCGCACACGAAGC
TGTCGTTTCCGAACCGGATCCTGCGCCAGGCGCGCTACAAACATCCGGCGACGTTCATCGAACAGGCGAAAGCGGGTGCG
GCGGTGCAGGAAGAGCGGGAGGTCGGCCCGCGCGATCTGCCGTTCGAGTTCATGCTGAACGCGCTGCGGCTCGTCGACGG
CGTGCCCACCCACAGCTTCGCGGAGCGCACGGGCATGTCGCTCGCGTCGATCGGGCCCGCGCTCGCGCAAGCGCAGCAGC
GTGGCCTCATCGTGCACGATCACACGCGCATCGCGCCGACGCCGCTCGGCCAGCGTTTCCTCAACGATCTGCAGGCGCTT
TTCCTGCGCGACGAATGA

Upstream 100 bases:

>100_bases
TCGGCGCGACGGCGGCCGAGCTCGATCCGGCCGCGAAGAACGCGGCGAGCCATCGCGCGCTCGCACTGAAGGCGCTCGTC
GCGCGGCTCGGAGAGATTCG

Downstream 100 bases:

>100_bases
CAGGCGGTTGACGGGCGTGAGCCGACGCGTGCGTGCCCAGGCGCGCACGCGCGAGTCGAACGAGGCACCGCGACGATTCG
TGCGCCGTTTCGGTTACAAT

Product: coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSDAATNGARVVATFAAPGKIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPEHDYLDALRADLEHALPLVWG
RQVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKAL
GRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETALTFAPPHLSLYHLTLEPNTYFAKFPPAVPDDDAS
ADMQDWLHERTAQASYARYEVSAYAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGA
AVQEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSLASIGPALAQAQQRGLIVHDHTRIAPTPLGQRFLNDLQAL
FLRDE

Sequences:

>Translated_405_residues
MSDAATNGARVVATFAAPGKIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPEHDYLDALRADLEHALPLVWG
RQVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKAL
GRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETALTFAPPHLSLYHLTLEPNTYFAKFPPAVPDDDAS
ADMQDWLHERTAQASYARYEVSAYAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGA
AVQEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSLASIGPALAQAQQRGLIVHDHTRIAPTPLGQRFLNDLQAL
FLRDE
>Mature_404_residues
SDAATNGARVVATFAAPGKIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPEHDYLDALRADLEHALPLVWGR
QVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALG
RIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETALTFAPPHLSLYHLTLEPNTYFAKFPPAVPDDDASA
DMQDWLHERTAQASYARYEVSAYAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGAA
VQEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSLASIGPALAQAQQRGLIVHDHTRIAPTPLGQRFLNDLQALF
LRDE

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=270, Percent_Identity=38.8888888888889, Blast_Score=170, Evalue=3e-42,
Organism=Escherichia coli, GI1789325, Length=382, Percent_Identity=49.738219895288, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI87082341, Length=281, Percent_Identity=30.9608540925267, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44697; Mature: 44566

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAATNGARVVATFAAPGKIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPE
CCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCC
HDYLDALRADLEHALPLVWGRQVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEI
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
TLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTF
EEECCCCCCHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENFNLDLMFALPNQTLDECRADLETALTFAPPHLSLYHLTLEPNTYFAKFPPAVPDDDAS
CCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCEEEEEEECCCCEEEECCCCCCCCCCC
ADMQDWLHERTAQASYARYEVSAYAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRI
CHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH
LRQARYKHPATFIEQAKAGAAVQEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMS
HHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCC
LASIGPALAQAQQRGLIVHDHTRIAPTPLGQRFLNDLQALFLRDE
HHHHCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDAATNGARVVATFAAPGKIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPE
CCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCC
HDYLDALRADLEHALPLVWGRQVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEI
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
TLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTF
EEECCCCCCHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENFNLDLMFALPNQTLDECRADLETALTFAPPHLSLYHLTLEPNTYFAKFPPAVPDDDAS
CCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCEEEEEEECCCCEEEECCCCCCCCCCC
ADMQDWLHERTAQASYARYEVSAYAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRI
CHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH
LRQARYKHPATFIEQAKAGAAVQEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMS
HHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCC
LASIGPALAQAQQRGLIVHDHTRIAPTPLGQRFLNDLQALFLRDE
HHHHCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]