| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is purK [H]
Identifier: 83720003
GI number: 83720003
Start: 766293
End: 767489
Strand: Direct
Name: purK [H]
Synonym: BTH_I0668
Alternate gene names: 83720003
Gene position: 766293-767489 (Clockwise)
Preceding gene: 83719452
Following gene: 83719082
Centisome position: 20.12
GC content: 71.85
Gene sequence:
>1197_bases ATGACTGCACTCCCCAACCCGAATTCCCCGATCCTGCCGGGCGCCTGGCTCGGCATGGTCGGCGGCGGCCAGCTCGGCCG CATGTTCTGCTTCGCCGCGCAGGCGATGGGCTACCGCGTCGCCGTGCTCGATCCCGATCCGACGAGCCCGGCGGGCGCCG TCGCGGACAAGCATCTGCGCGCCGCATACGACGACGAGGCCGCGCTCGCCGAGCTCGCGCAATTGTGCGACGCGGTATCG ACCGAGTTCGAGAACGTGCCCGCCGCGAGCCTCGATTTCCTCGCGCAATCGACGTTCGTCGCGCCCGCCGGCCGCTGCGT CGCGATCGCGCAGGACCGGATCGCCGAGAAGCGTTTCATCGCGGCGTCGGGCGTGCCGGTCGCGCCGCACGTCGTGATCG AGTCGGCCGCGCAGCTCGCGGCGCTCGCCGATGCGGATCTCGCCGCGGTGCTGCCCGGCATCCTGAAGACCGCGCGCCTC GGCTACGACGGCAAGGGGCAGGTGCGCGTCGCGACCGCGCAGGAAGCGCGCGACGCGTATGGGTCGCTCGGCGGCGTGCC GTGCGTGCTCGAGAAGCGCCTGCCGCTCAAATACGAGGTGTCGGCGCTGATCGCGCGCGGCGCGAACGGCGCGTCCGCCG TGTTTCCGCTCGCGCAGAACACGCACCACGGCGGCATCCTGTCGCTGAGCGTCGTGCCCGCGCCCGCCGCGAGCGATGCG CTCGTGCGCGACGCGCAGCAGGCGGCCGCGCGGATCGCCGATTCGCTCGACTACGTCGGCGTGCTGTGCGTCGAGTTCTT CGTGCTCGAAGACGGCTCGCTCGTTGCGAACGAAATGGCGCCGCGGCCGCACAATTCCGGCCACTACACGGTCGATGCGT GCGAGACGAGCCAGTTCGAGCAGCAGGTGCGCGCGATGACGCGGCTGCCGCTCGGCAGCACGCGCCAGCATTCGCCCGCC GCGATGCTTAACGTGCTCGGCGACGTATGGTTCGCGAGCGGCGCGTCGGGCGAGCCCGTCACGCCGCCGTGGGACCAGGT CGCCGCGATGCCGACCGCGCGGCTGCATCTGTACGGCAAGGAAGAAGCGCGGGTCGGCCGCAAGATGGGCCACGTGAACT TCACCGCGGCGACGCTCGACGAAGCGGTCGCGGGCGCGACCGCGTGCGCGCGGCTGTTGCGCATTCCGCTCGACTGA
Upstream 100 bases:
>100_bases GATGACGCTGCCGCCGCTGTGAGGCCGCCGCGCCGCCGCCTGCAACATCGATCGTCCTGACCGCGGCGGGCGCCGCCGCC CGCCGCCACCGACCCTAGAC
Downstream 100 bases:
>100_bases CGGAGCGCGAGATGTCGAACGATCGACCGATTCCGACCGACGAGCAGATCGACGAAGCCGCCGCGCTGCTCGACGCGGGC GAACTCGTCGCGTTTCCGAC
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTALPNPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLRAAYDDEAALAELAQLCDAVS TEFENVPAASLDFLAQSTFVAPAGRCVAIAQDRIAEKRFIAASGVPVAPHVVIESAAQLAALADADLAAVLPGILKTARL GYDGKGQVRVATAQEARDAYGSLGGVPCVLEKRLPLKYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDA LVRDAQQAAARIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFEQQVRAMTRLPLGSTRQHSPA AMLNVLGDVWFASGASGEPVTPPWDQVAAMPTARLHLYGKEEARVGRKMGHVNFTAATLDEAVAGATACARLLRIPLD
Sequences:
>Translated_398_residues MTALPNPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLRAAYDDEAALAELAQLCDAVS TEFENVPAASLDFLAQSTFVAPAGRCVAIAQDRIAEKRFIAASGVPVAPHVVIESAAQLAALADADLAAVLPGILKTARL GYDGKGQVRVATAQEARDAYGSLGGVPCVLEKRLPLKYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDA LVRDAQQAAARIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFEQQVRAMTRLPLGSTRQHSPA AMLNVLGDVWFASGASGEPVTPPWDQVAAMPTARLHLYGKEEARVGRKMGHVNFTAATLDEAVAGATACARLLRIPLD >Mature_397_residues TALPNPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLRAAYDDEAALAELAQLCDAVST EFENVPAASLDFLAQSTFVAPAGRCVAIAQDRIAEKRFIAASGVPVAPHVVIESAAQLAALADADLAAVLPGILKTARLG YDGKGQVRVATAQEARDAYGSLGGVPCVLEKRLPLKYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDAL VRDAQQAAARIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFEQQVRAMTRLPLGSTRQHSPAA MLNVLGDVWFASGASGEPVTPPWDQVAAMPTARLHLYGKEEARVGRKMGHVNFTAATLDEAVAGATACARLLRIPLD
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=383, Percent_Identity=31.5926892950392, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1788155, Length=387, Percent_Identity=25.8397932816537, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324702, Length=376, Percent_Identity=32.7127659574468, Blast_Score=201, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006115 - InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp; PF03446 NAD_binding_2 [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 41464; Mature: 41332
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPNPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLR CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHH AAYDDEAALAELAQLCDAVSTEFENVPAASLDFLAQSTFVAPAGRCVAIAQDRIAEKRFI HHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHEE AASGVPVAPHVVIESAAQLAALADADLAAVLPGILKTARLGYDGKGQVRVATAQEARDAY EECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH GSLGGVPCVLEKRLPLKYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDA HCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCHH LVRDAQQAAARIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEEECCCHHHHH QQVRAMTRLPLGSTRQHSPAAMLNVLGDVWFASGASGEPVTPPWDQVAAMPTARLHLYGK HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEECC EEARVGRKMGHVNFTAATLDEAVAGATACARLLRIPLD HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TALPNPNSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDPTSPAGAVADKHLR CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHH AAYDDEAALAELAQLCDAVSTEFENVPAASLDFLAQSTFVAPAGRCVAIAQDRIAEKRFI HHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHEE AASGVPVAPHVVIESAAQLAALADADLAAVLPGILKTARLGYDGKGQVRVATAQEARDAY EECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH GSLGGVPCVLEKRLPLKYEVSALIARGANGASAVFPLAQNTHHGGILSLSVVPAPAASDA HCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCHH LVRDAQQAAARIADSLDYVGVLCVEFFVLEDGSLVANEMAPRPHNSGHYTVDACETSQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEEECCCHHHHH QQVRAMTRLPLGSTRQHSPAAMLNVLGDVWFASGASGEPVTPPWDQVAAMPTARLHLYGK HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEECC EEARVGRKMGHVNFTAATLDEAVAGATACARLLRIPLD HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]