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The map label for this gene is yafJ [C]

Identifier: 83719954

GI number: 83719954

Start: 1377804

End: 1378787

Strand: Reverse

Name: yafJ [C]

Synonym: BTH_I1229

Alternate gene names: 83719954

Gene position: 1378787-1377804 (Counterclockwise)

Preceding gene: 83721394

Following gene: 83720264

Centisome position: 36.2

GC content: 65.96

Gene sequence:

>984_bases
ATGCTTGAAGCCGACATTGTACCGGTTCCGTCCGGTGTACTCCCCGCCAGCCTCAGCCGCACCCGCGATATGTGCCAACT
CTTCGGAATGAACTGCGCCGAACCGACGGACGTGACGTTCTCGTTTACCGGCTTCGCGGCCCGCGGCGGGCTCACCGATC
ATCATGCCGACGGCTGGGGCATCGCGTTCTTCGAGGACAAGGCCTGCCGCCTGTTCATCGACCAGCAGTCGTCCGCGACG
TCGCCCATCGCCGAGATGGTCAAGCGCTACCCGATCAAGTCGAAGAACACGATCGCGCACATCCGCAAGGCGACGCAAGG
GCACATCCTGCTCGAGAACTGCCATCCGTTCATGCGGGAGCTGTGGGGCCGCCACTGGATCTTCGCGCACAACGGCGATC
TGCACGAATACTCGCCCGATCTCGAAGGCAGCGTCTATCAGCCGGTTGGCACGACCGACAGCGAAAAGGCGTTCTGCAAG
CTGATGCAGGGCCTGCGCGAAGCGTTTCCGAGCGCGCAGCCGCCGCTGCCCGAGCTGTTCGAGCAGATCGGCGAGCTCAC
GCGCGACATCACGCGGCACGGCGTCTTCAACTTCCTGATGTCGAACGGGCAGGCGCTGTTCGCGCATTGCTCGACGCGCC
TGCACTACCTCGTGCGGCGCTGGCCGTTCTCGACCGCGCACCTGATCGACGAAGACATCTCGATCGACTTCGCGAAGTAC
ACGACGCCGGAAGACCGCGTCGCGGTGATCGCGACACAGCCGCTCACCGACGACGAAGTGTGGACCGCGCTCGAGCCGGG
CGAACTCGTGATGTTCCAGTGCGGCGACGTCGCGGCGACAATGCGCATTCCGGTGCCGGAAGCCGTGCTCGAGAAGCTGC
GCGATCCGTCGCTCGACGCCTCCGCGTCGGCGCCGCGCCGGGCGGCCGCGCTCGCGGCGAGCGGCGAGGCCGGCGATCTC
GGCGACGATCCGGTCGATTTCTGA

Upstream 100 bases:

>100_bases
GCGAGAAGCGATGCGCGCGGCGGCGCCTGACTGACGGCAAACCGCAACACGGAACCGCGCGCGCGCGGTTTTCGCCTTTT
GCCGCTTGGGGCTCGGTGAT

Downstream 100 bases:

>100_bases
GCGCGTCCGATTGCCGGCCGCGCGAACGCTGCGCGAGCGGGAACGCGTGCGCCGCACGCCGGGCATGCGCCTCGCGCCTG
CGCCGCCGCGACTCTGAGCG

Product: glutamine amidotransferases class-II domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLEADIVPVPSGVLPASLSRTRDMCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDQQSSAT
SPIAEMVKRYPIKSKNTIAHIRKATQGHILLENCHPFMRELWGRHWIFAHNGDLHEYSPDLEGSVYQPVGTTDSEKAFCK
LMQGLREAFPSAQPPLPELFEQIGELTRDITRHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKY
TTPEDRVAVIATQPLTDDEVWTALEPGELVMFQCGDVAATMRIPVPEAVLEKLRDPSLDASASAPRRAAALAASGEAGDL
GDDPVDF

Sequences:

>Translated_327_residues
MLEADIVPVPSGVLPASLSRTRDMCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDQQSSAT
SPIAEMVKRYPIKSKNTIAHIRKATQGHILLENCHPFMRELWGRHWIFAHNGDLHEYSPDLEGSVYQPVGTTDSEKAFCK
LMQGLREAFPSAQPPLPELFEQIGELTRDITRHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKY
TTPEDRVAVIATQPLTDDEVWTALEPGELVMFQCGDVAATMRIPVPEAVLEKLRDPSLDASASAPRRAAALAASGEAGDL
GDDPVDF
>Mature_327_residues
MLEADIVPVPSGVLPASLSRTRDMCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDQQSSAT
SPIAEMVKRYPIKSKNTIAHIRKATQGHILLENCHPFMRELWGRHWIFAHNGDLHEYSPDLEGSVYQPVGTTDSEKAFCK
LMQGLREAFPSAQPPLPELFEQIGELTRDITRHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKY
TTPEDRVAVIATQPLTDDEVWTALEPGELVMFQCGDVAATMRIPVPEAVLEKLRDPSLDASASAPRRAAALAASGEAGDL
GDDPVDF

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=253, Percent_Identity=51.3833992094862, Blast_Score=280, Evalue=9e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 36162; Mature: 36162

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEADIVPVPSGVLPASLSRTRDMCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWG
CCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCE
IAFFEDKACRLFIDQQSSATSPIAEMVKRYPIKSKNTIAHIRKATQGHILLENCHPFMRE
EEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCHHHHH
LWGRHWIFAHNGDLHEYSPDLEGSVYQPVGTTDSEKAFCKLMQGLREAFPSAQPPLPELF
HCCCEEEEEECCCCHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
EQIGELTRDITRHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKY
HHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHCC
TTPEDRVAVIATQPLTDDEVWTALEPGELVMFQCGDVAATMRIPVPEAVLEKLRDPSLDA
CCCCCCEEEEEECCCCCCHHEEECCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCCCC
SASAPRRAAALAASGEAGDLGDDPVDF
CCCCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLEADIVPVPSGVLPASLSRTRDMCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWG
CCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCE
IAFFEDKACRLFIDQQSSATSPIAEMVKRYPIKSKNTIAHIRKATQGHILLENCHPFMRE
EEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCHHHHH
LWGRHWIFAHNGDLHEYSPDLEGSVYQPVGTTDSEKAFCKLMQGLREAFPSAQPPLPELF
HCCCEEEEEECCCCHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
EQIGELTRDITRHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKY
HHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHCC
TTPEDRVAVIATQPLTDDEVWTALEPGELVMFQCGDVAATMRIPVPEAVLEKLRDPSLDA
CCCCCCEEEEEECCCCCCHHEEECCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCCCC
SASAPRRAAALAASGEAGDLGDDPVDF
CCCCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]