Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is yhfA [H]

Identifier: 83721394

GI number: 83721394

Start: 1381743

End: 1382207

Strand: Reverse

Name: yhfA [H]

Synonym: BTH_I1232

Alternate gene names: 83721394

Gene position: 1382207-1381743 (Counterclockwise)

Preceding gene: 83721074

Following gene: 83719954

Centisome position: 36.29

GC content: 63.44

Gene sequence:

>465_bases
ATGCCGGATTACAACCGAATCAAGCAACGCTGGAGCTCGCGCATGGAATGCAAAGTAAGCTGGATGGGGCAAGACGGCAT
GGCATTCGCCGCCCAGACGGGCAGCGGCCACCTCGTCACGATGGACGGCGCGCCCGAAGGCGGCGGACACAATCTTGCGC
CGCGTCCGATGGAGATGGTCCTCGTCGGCACGGGCGGATGCACGGCCTATGACGTCGTGCTGATCCTCAAGAAGAGCCGC
CAGGAAGTCACCGGCTGCTCGGTGACCCTGCAGGCCGAGCGCGCGAGCGAGGACCCGAAGGTGTTCACGAAGGTGCACTT
CCACTTCACGGTGACGGGCCGCAACCTGAATCCCGCGACCGTCGAGCGCGCGATCAACCTGTCGCACGACAAGTATTGCT
CGGCGTCGATCATGATCGCGAAGACGGCCGAGCTGTCGCATTCGTTCGAGATCGTCACCGCGTAA

Upstream 100 bases:

>100_bases
GAGGGCGATCGGCATCGCCCGGACCGCGCGTCGCATCCGGCCCGGCGCCGTTTTCACCGGTCTTGCAGCGCATCAGCCGC
CAGTTGCGGGCGGGGCTACA

Downstream 100 bases:

>100_bases
CGCGATCGCGCGCATCACTGCGGCGCTGAGGCGCGAGCGCGCTGCAGCGTGGCCGCGCGGATCGAGAAAAAGAAAAAGCC
GGCGCCGCATCGGGCGCCGG

Product: OsmC/Ohr family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPDYNRIKQRWSSRMECKVSWMGQDGMAFAAQTGSGHLVTMDGAPEGGGHNLAPRPMEMVLVGTGGCTAYDVVLILKKSR
QEVTGCSVTLQAERASEDPKVFTKVHFHFTVTGRNLNPATVERAINLSHDKYCSASIMIAKTAELSHSFEIVTA

Sequences:

>Translated_154_residues
MPDYNRIKQRWSSRMECKVSWMGQDGMAFAAQTGSGHLVTMDGAPEGGGHNLAPRPMEMVLVGTGGCTAYDVVLILKKSR
QEVTGCSVTLQAERASEDPKVFTKVHFHFTVTGRNLNPATVERAINLSHDKYCSASIMIAKTAELSHSFEIVTA
>Mature_153_residues
PDYNRIKQRWSSRMECKVSWMGQDGMAFAAQTGSGHLVTMDGAPEGGGHNLAPRPMEMVLVGTGGCTAYDVVLILKKSRQ
EVTGCSVTLQAERASEDPKVFTKVHFHFTVTGRNLNPATVERAINLSHDKYCSASIMIAKTAELSHSFEIVTA

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789755, Length=140, Percent_Identity=46.4285714285714, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 16803; Mature: 16672

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDYNRIKQRWSSRMECKVSWMGQDGMAFAAQTGSGHLVTMDGAPEGGGHNLAPRPMEMV
CCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEE
LVGTGGCTAYDVVLILKKSRQEVTGCSVTLQAERASEDPKVFTKVHFHFTVTGRNLNPAT
EEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCHHH
VERAINLSHDKYCSASIMIAKTAELSHSFEIVTA
HHHEECCCCCCCCCEEEEEEEECCCCCCEEEEEC
>Mature Secondary Structure 
PDYNRIKQRWSSRMECKVSWMGQDGMAFAAQTGSGHLVTMDGAPEGGGHNLAPRPMEMV
CCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEE
LVGTGGCTAYDVVLILKKSRQEVTGCSVTLQAERASEDPKVFTKVHFHFTVTGRNLNPAT
EEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCHHH
VERAINLSHDKYCSASIMIAKTAELSHSFEIVTA
HHHEECCCCCCCCCEEEEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]