| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is proP [H]
Identifier: 83719892
GI number: 83719892
Start: 3207918
End: 3209798
Strand: Direct
Name: proP [H]
Synonym: BTH_I2793
Alternate gene names: 83719892
Gene position: 3207918-3209798 (Clockwise)
Preceding gene: 83720697
Following gene: 83720657
Centisome position: 84.21
GC content: 68.9
Gene sequence:
>1881_bases ATGTTGTCTCGTTCAACGGCCTACGCCTGTTTAATTATTTCGGTCACCCGACCGTTCGGCCCTGTGCCGCGACTGGCCGT CCGGAATTTCGCTCACAAGGAAGCGTGCCTTCGGGCAGCTTTTTTCGTTTCGACGCCCTCCAAGGGCATTCAACCGGCCG CGCGCCACGCGACGTGCCGGTTCGCCGACCGTCCCCGTGCGGCGGTCTTTTCTCACGAGTGCAAGTGCGCGACGACCACC GGGTCCGCGCCGATCGGTTTCCGCCATGGATTAAGCGCTTCATGCGCCCCGCTCACGCTCGCGACCCTTGTCCGATCGCG AGCCGCACTCTCCGGCAAACCGTGGCGAACCGCGCCCTGTCGCGCGATTCGGCCGCCGTCACAGGAGTTTTCGACCTTGA CTGCAACACCCGCCCCCTCTACCCCGTCCATCGCGCCCGCCGAAGCGGCGCCCGCCGCCGCGCACGAAATCACCGTCGTC GACCAGGGGCTCCTGAAACGCGCCGTCGGCGCGATGGCGCTCGGCAACGCGATGGAATGGTTCGACTTCGGCGTCTACAG CTACATCGCCGTCACGCTCGGCCAGGTGTTCTTCCCGTCGAGCAGCCCGTCCGCGCAGTTGCTCGCGACGTTCGGCACGT TCGCCGCCGCATTCCTCGTGCGCCCGCTCGGCGGAATGGTGTTCGGCCCGCTCGGCGACCGCATCGGCCGCCAGCGCGTG CTCGCGATGACGATGATCATGATGGCCGTCGGCACGTTCGCGATCGGCCTCATCCCGAGCTACGACTCGATCGGCCTGCT CGCGCCCGCGCTGCTCCTCGTCGCGCGCCTCGTGCAGGGCTTCTCGACGGGCGGCGAATACGGCGGCGCGGCGACCTTCA TCGCCGAGTTCTCGACCGACAAGCGCCGCGGCTTCATGGGCAGCTTCCTAGAGTTCGGCACGCTGATCGGCTATGTGATG GGCGCGGGCGTCGTCGCGCTGCTGACCGCCTCGCTGTCGCACGACGCGCTGCTGTCGTGGGGCTGGCGCGTGCCGTTCCT GATCGCCGGCCCGCTCGGCCTGATCGGCCTGTACATCCGGATGAAGCTCGAAGAAACGCCCGCGTTCAAGCGCCAGGCCG AGGCGCGCGAAGCGCAGGACAAGGCGGTGCCGAAAGCGCATTTCCGTCGGCAGCTCGCACGGCACTGGCGCGCGCTGCTG CTGTGCGTCGGACTCGTGCTGATCTTCAACGTCACCGACTACATGGCGCTGTCGTACCTGCCGAGCTATCTATCGTCGAC GCTGCATTTCGACGAGGCGCACGGCCTCGTGCTGATCCTGATCGTGATGGTGCTGATGATGCCGATGACGCTCGCCACGG GCCGCCTGTCGGACGCCGTCGGCCGCAAGCCGGTGATGCTCGCCGGCTGCATCGGCCTGTTCGCGCTCGCGATTCCCGCG CTGCTGCTGATCCGCACGGGCGAGACGTCACTCGTGTTCGGCGGCCTGCTGATCCTCGGCGCGCTGCTGTCGTGCTTCAC GGGCGTGATGCCGTCGGCGCTGCCGGCGCTCTTCCCGACCGAGATCCGCTACGGCGCGCTCGCGATCGGCTTCAACGTGT CGGTGTCGCTGTTCGGCGGCACGACGCCGCTCGCCGCCGCGTGGCTCGTCGACGCGACGGGCAACCTGATGATGCCCGCG TACTATCTGATGGGCGCGGCCGTGATCGGCGCGATCTCGGTGATGGCGCTGCCCGAGAGCGCGCGCCAGCCGCTCAAGGG CTCGCCGCCCGCCGTCGCGTCGCACCGCGAGGCGCATGCGCTCGCGCGCGAGATCAAGCGCCGCGAGGCGGCCGAGCGCG ACGACGGCGGCTATGCGAGCGCTGCGGCGCTGCGCGCGTGA
Upstream 100 bases:
>100_bases CCGCGCGACGCCGCGGCAATCGGCGCGATCATACCCCACGCGACGCCCGAAAACCGGCGCTCGAGCGGCAATTTGCGCGA TCCTCATTCATCGTGCTATC
Downstream 100 bases:
>100_bases AATTCGATCGCCGCGACGCAGCCGCGTAGGCGCGTCGTTCGATGACGGACCGCGGAGGCGGCCTTGCGATGCCCGACGGG CGGCGCGGGGCCGCTCCCGC
Product: proline/betaine transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MLSRSTAYACLIISVTRPFGPVPRLAVRNFAHKEACLRAAFFVSTPSKGIQPAARHATCRFADRPRAAVFSHECKCATTT GSAPIGFRHGLSASCAPLTLATLVRSRAALSGKPWRTAPCRAIRPPSQEFSTLTATPAPSTPSIAPAEAAPAAAHEITVV DQGLLKRAVGAMALGNAMEWFDFGVYSYIAVTLGQVFFPSSSPSAQLLATFGTFAAAFLVRPLGGMVFGPLGDRIGRQRV LAMTMIMMAVGTFAIGLIPSYDSIGLLAPALLLVARLVQGFSTGGEYGGAATFIAEFSTDKRRGFMGSFLEFGTLIGYVM GAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIRMKLEETPAFKRQAEAREAQDKAVPKAHFRRQLARHWRALL LCVGLVLIFNVTDYMALSYLPSYLSSTLHFDEAHGLVLILIVMVLMMPMTLATGRLSDAVGRKPVMLAGCIGLFALAIPA LLLIRTGETSLVFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGFNVSVSLFGGTTPLAAAWLVDATGNLMMPA YYLMGAAVIGAISVMALPESARQPLKGSPPAVASHREAHALAREIKRREAAERDDGGYASAAALRA
Sequences:
>Translated_626_residues MLSRSTAYACLIISVTRPFGPVPRLAVRNFAHKEACLRAAFFVSTPSKGIQPAARHATCRFADRPRAAVFSHECKCATTT GSAPIGFRHGLSASCAPLTLATLVRSRAALSGKPWRTAPCRAIRPPSQEFSTLTATPAPSTPSIAPAEAAPAAAHEITVV DQGLLKRAVGAMALGNAMEWFDFGVYSYIAVTLGQVFFPSSSPSAQLLATFGTFAAAFLVRPLGGMVFGPLGDRIGRQRV LAMTMIMMAVGTFAIGLIPSYDSIGLLAPALLLVARLVQGFSTGGEYGGAATFIAEFSTDKRRGFMGSFLEFGTLIGYVM GAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIRMKLEETPAFKRQAEAREAQDKAVPKAHFRRQLARHWRALL LCVGLVLIFNVTDYMALSYLPSYLSSTLHFDEAHGLVLILIVMVLMMPMTLATGRLSDAVGRKPVMLAGCIGLFALAIPA LLLIRTGETSLVFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGFNVSVSLFGGTTPLAAAWLVDATGNLMMPA YYLMGAAVIGAISVMALPESARQPLKGSPPAVASHREAHALAREIKRREAAERDDGGYASAAALRA >Mature_626_residues MLSRSTAYACLIISVTRPFGPVPRLAVRNFAHKEACLRAAFFVSTPSKGIQPAARHATCRFADRPRAAVFSHECKCATTT GSAPIGFRHGLSASCAPLTLATLVRSRAALSGKPWRTAPCRAIRPPSQEFSTLTATPAPSTPSIAPAEAAPAAAHEITVV DQGLLKRAVGAMALGNAMEWFDFGVYSYIAVTLGQVFFPSSSPSAQLLATFGTFAAAFLVRPLGGMVFGPLGDRIGRQRV LAMTMIMMAVGTFAIGLIPSYDSIGLLAPALLLVARLVQGFSTGGEYGGAATFIAEFSTDKRRGFMGSFLEFGTLIGYVM GAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIRMKLEETPAFKRQAEAREAQDKAVPKAHFRRQLARHWRALL LCVGLVLIFNVTDYMALSYLPSYLSSTLHFDEAHGLVLILIVMVLMMPMTLATGRLSDAVGRKPVMLAGCIGLFALAIPA LLLIRTGETSLVFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGFNVSVSLFGGTTPLAAAWLVDATGNLMMPA YYLMGAAVIGAISVMALPESARQPLKGSPPAVASHREAHALAREIKRREAAERDDGGYASAAALRA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=472, Percent_Identity=51.271186440678, Blast_Score=516, Evalue=1e-147, Organism=Escherichia coli, GI1788292, Length=432, Percent_Identity=32.1759259259259, Blast_Score=203, Evalue=3e-53, Organism=Escherichia coli, GI1788942, Length=410, Percent_Identity=34.1463414634146, Blast_Score=201, Evalue=9e-53, Organism=Escherichia coli, GI1789941, Length=428, Percent_Identity=34.5794392523364, Blast_Score=183, Evalue=4e-47, Organism=Escherichia coli, GI87082231, Length=210, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI87082404, Length=365, Percent_Identity=25.4794520547945, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 66248; Mature: 66248
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRSTAYACLIISVTRPFGPVPRLAVRNFAHKEACLRAAFFVSTPSKGIQPAARHATCR CCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC FADRPRAAVFSHECKCATTTGSAPIGFRHGLSASCAPLTLATLVRSRAALSGKPWRTAPC CCCCCCHHHHCCCCCEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC RAIRPPSQEFSTLTATPAPSTPSIAPAEAAPAAAHEITVVDQGLLKRAVGAMALGNAMEW CCCCCCCHHHCEEECCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHCCHHHH FDFGVYSYIAVTLGQVFFPSSSPSAQLLATFGTFAAAFLVRPLGGMVFGPLGDRIGRQRV HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHH LAMTMIMMAVGTFAIGLIPSYDSIGLLAPALLLVARLVQGFSTGGEYGGAATFIAEFSTD HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC KRRGFMGSFLEFGTLIGYVMGAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECHHHHHHHHHH MKLEETPAFKRQAEAREAQDKAVPKAHFRRQLARHWRALLLCVGLVLIFNVTDYMALSYL EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSYLSSTLHFDEAHGLVLILIVMVLMMPMTLATGRLSDAVGRKPVMLAGCIGLFALAIPA HHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHH LLLIRTGETSLVFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGFNVSVSLFGG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEEECEEEEEEECC TTPLAAAWLVDATGNLMMPAYYLMGAAVIGAISVMALPESARQPLKGSPPAVASHREAHA CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHCHHHHHH LAREIKRREAAERDDGGYASAAALRA HHHHHHHHHHCCCCCCCCHHHHHHCC >Mature Secondary Structure MLSRSTAYACLIISVTRPFGPVPRLAVRNFAHKEACLRAAFFVSTPSKGIQPAARHATCR CCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC FADRPRAAVFSHECKCATTTGSAPIGFRHGLSASCAPLTLATLVRSRAALSGKPWRTAPC CCCCCCHHHHCCCCCEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC RAIRPPSQEFSTLTATPAPSTPSIAPAEAAPAAAHEITVVDQGLLKRAVGAMALGNAMEW CCCCCCCHHHCEEECCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHCCHHHH FDFGVYSYIAVTLGQVFFPSSSPSAQLLATFGTFAAAFLVRPLGGMVFGPLGDRIGRQRV HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHH LAMTMIMMAVGTFAIGLIPSYDSIGLLAPALLLVARLVQGFSTGGEYGGAATFIAEFSTD HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC KRRGFMGSFLEFGTLIGYVMGAGVVALLTASLSHDALLSWGWRVPFLIAGPLGLIGLYIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECHHHHHHHHHH MKLEETPAFKRQAEAREAQDKAVPKAHFRRQLARHWRALLLCVGLVLIFNVTDYMALSYL EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSYLSSTLHFDEAHGLVLILIVMVLMMPMTLATGRLSDAVGRKPVMLAGCIGLFALAIPA HHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHH LLLIRTGETSLVFGGLLILGALLSCFTGVMPSALPALFPTEIRYGALAIGFNVSVSLFGG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEEECEEEEEEECC TTPLAAAWLVDATGNLMMPAYYLMGAAVIGAISVMALPESARQPLKGSPPAVASHREAHA CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHCHHHHHH LAREIKRREAAERDDGGYASAAALRA HHHHHHHHHHCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]