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The map label for this gene is dnaQ [H]

Identifier: 83720697

GI number: 83720697

Start: 3206506

End: 3207231

Strand: Direct

Name: dnaQ [H]

Synonym: BTH_I2791

Alternate gene names: 83720697

Gene position: 3206506-3207231 (Clockwise)

Preceding gene: 83719592

Following gene: 83719892

Centisome position: 84.18

GC content: 65.98

Gene sequence:

>726_bases
ATGCGCCAGATCATTCTCGATACCGAAACCACCGGCCTGAACGCCCGCGCGGGCGACCGCATCATCGAAGTCGGCTGCGT
CGAGCTGCTGAACCGCCGGCTCACCGGCAACAACCTGCACTTCTACGTGAATCCCGAGCGCGACAGCGATCCGGGCGCGC
TCGCGGTGCACGGCCTCACGACCGAATTCCTGCGCGACAAGCCGAAGTTCGCCGACATCGTCGATCAGTTGCGCGACTTC
GTCCGCGACGCGGAACTCATCATCCATAACGCGCCGTTCGACCTCGGCTTTCTCGACGCCGAGTTCGCGCTGCTCGGCCT
GCCGGCCTTCTCCGACCACTGCGCGGGCGTGATCGACACGCTCGTGCAAGCCAAGCAGATGTTCCCCGGCAAGCGCAACT
CGCTCGACGCGCTGTGCGATCGCTTCGGGATCAGCAACGCGCACCGGACGCTGCACGGCGCGCTGCTCGACTCGGAGTTG
CTCGCCGAGGTGTATCTCGCGATGACGCGCGGGCAGGAAAGCCTCGTCATCGACATGCTCGACGAAGCCGGCGACGCGCA
TCGCAAAGGCGACGAGCCGCAAATGGCGTTCAGCGGGCTCGACCTGCCAGTGCTCGCCGCGACCGACGAGGAACTCGCCG
ATCACGAGGCGCAACTCGACGCGCTCGACAAGTCCGTCAAGGGTGCGTGCGTATGGCGTAAGGAAGCGGCGGTCGACGGA
GCCTGA

Upstream 100 bases:

>100_bases
GCGCTCGCGAACCGCGGCGTCGAATCGCTCGCGCAGGCATGAGCCGGCTCGCGCGCCCCGTCCCACTTCACGACTGACTC
GAATTCTCCATTCTTCCGAC

Downstream 100 bases:

>100_bases
CCGCGGCGCCGCGCGGACGGCGAACGGCGAACGGCGGGCGTTCGGATGCGGATGTGCGGCGCACGTCATCGGCGTTCCAT
CGATGCTCGCGTTGCCGGGC

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRQIILDTETTGLNARAGDRIIEVGCVELLNRRLTGNNLHFYVNPERDSDPGALAVHGLTTEFLRDKPKFADIVDQLRDF
VRDAELIIHNAPFDLGFLDAEFALLGLPAFSDHCAGVIDTLVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSEL
LAEVYLAMTRGQESLVIDMLDEAGDAHRKGDEPQMAFSGLDLPVLAATDEELADHEAQLDALDKSVKGACVWRKEAAVDG
A

Sequences:

>Translated_241_residues
MRQIILDTETTGLNARAGDRIIEVGCVELLNRRLTGNNLHFYVNPERDSDPGALAVHGLTTEFLRDKPKFADIVDQLRDF
VRDAELIIHNAPFDLGFLDAEFALLGLPAFSDHCAGVIDTLVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSEL
LAEVYLAMTRGQESLVIDMLDEAGDAHRKGDEPQMAFSGLDLPVLAATDEELADHEAQLDALDKSVKGACVWRKEAAVDG
A
>Mature_241_residues
MRQIILDTETTGLNARAGDRIIEVGCVELLNRRLTGNNLHFYVNPERDSDPGALAVHGLTTEFLRDKPKFADIVDQLRDF
VRDAELIIHNAPFDLGFLDAEFALLGLPAFSDHCAGVIDTLVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSEL
LAEVYLAMTRGQESLVIDMLDEAGDAHRKGDEPQMAFSGLDLPVLAATDEELADHEAQLDALDKSVKGACVWRKEAAVDG
A

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786409, Length=238, Percent_Identity=52.9411764705882, Blast_Score=250, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006309
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 26378; Mature: 26378

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIILDTETTGLNARAGDRIIEVGCVELLNRRLTGNNLHFYVNPERDSDPGALAVHGLT
CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCH
TEFLRDKPKFADIVDQLRDFVRDAELIIHNAPFDLGFLDAEFALLGLPAFSDHCAGVIDT
HHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH
LVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
DEAGDAHRKGDEPQMAFSGLDLPVLAATDEELADHEAQLDALDKSVKGACVWRKEAAVDG
HCCCCHHCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEHHHCCCC
A
C
>Mature Secondary Structure
MRQIILDTETTGLNARAGDRIIEVGCVELLNRRLTGNNLHFYVNPERDSDPGALAVHGLT
CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCH
TEFLRDKPKFADIVDQLRDFVRDAELIIHNAPFDLGFLDAEFALLGLPAFSDHCAGVIDT
HHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH
LVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
DEAGDAHRKGDEPQMAFSGLDLPVLAATDEELADHEAQLDALDKSVKGACVWRKEAAVDG
HCCCCHHCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEHHHCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3023634; 6316347; 3540531; 9278503; 1575709 [H]