| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is pcaK [H]
Identifier: 83719097
GI number: 83719097
Start: 816876
End: 818270
Strand: Direct
Name: pcaK [H]
Synonym: BTH_I0708
Alternate gene names: 83719097
Gene position: 816876-818270 (Clockwise)
Preceding gene: 83721267
Following gene: 83718642
Centisome position: 21.44
GC content: 72.97
Gene sequence:
>1395_bases ATGAGCGCCCGCCGCGGCAGCGCGCCGCTCGCGGTCGACATCGGCGCGACGCTCGACCACGGCCCGTTCACCGCAATGCA GCGCGTCGCGGTGCTGCTCGCCGCGTTCTCGATCGTGCTCGACGGCTTCGACAGCCAGTTGATCGGCTTCGCGATTCCGG TGCTGATCAAGGAGTGGGGGATCACGCGCGATGCATTCGCGCCCGCCGTCGCGGCGGGCCTGTTCGGAATGGGCGTCGGC AGCGCATGCGCGGGCCTGTTCGCGGACCGCTTCGGCAGGCGCTGGGCGATCATCGGCAGCGTGTTCGTGTTCGGCGCGGC GACCTGCGCGATCGGCTTCGCGCCGAATGTCGCGACCATCGCCGCGCTGCGCTTCTTCGCGGGCCTCGGGATCGGCGGCG CGCTGCCCACCGCGGCGACGATGACGGCCGAATACACGCCCGCGCGCCGCCGCACGATGATGGTGACCGCGACGATCGTC TGCGTGCCGGCGGGCGGGATGCTTGCCGGCCTTTTCGCGCACGAGGTGCTGCCCGCATACGGCTGGCGCGGCCTGTTCTG GCTCGGCGGCGCGTTGCCGTTCGCGCTCGGCCTGCTGCTCGTGCGCGCGCTGCCCGAATCGCCGCGCTATCTGGCGCGCG ATCCGGCGCGCTGGCGCGAGCTCGGCGCGCTGCTCGCGCGAATGGGGCGGCCCGTCGCGGCGGGCACCGCGTTCACCGAT CTGGCCGAAGCGCGCGCGCACGAAGGGCAGCGGCGCGGCGTGCGCGCGCTGTTCTCGGCCGCCTACGCGCGCGACACGAT CGCATTGTGGTGTGCGTTCTGCATGTGCCTGCTCGCGGTCTACAGCGCATTCAGCTGGCTGCCGACGATGCTGACGTCGC AAGGCTTGAGCGTGTCGGTGGCGGGCTCCGGGCTTACCGCGTACAACCTCGGCGGCGTCGTGGGCGCGCTCGGCTGCGCG TTCGCGATCGGGCGCTTCGGCTCGCGCTGGCCGCTCGCGTTTTGCTGCGCGGGCGGCGCGGCGAGCGCCGCGTGGCTGCT CGGCGTCGATGCGGCAAGCCACACCGGCTGGCTGATCGCGGGCCTCGCCGCGCACGGCTTCTTCGTGAACGCGGTGCAAT CGACGATGTACGCGCTCTGCACGTACATCTATCCGACGCCCGTGCGCGCGACGGGCGCCGCCAGCGCCGTCGCGTTCGGC CGCGTCGGCGCGATTCTGAGCGCGTTCGCGGGCGCGTACGTGATCTCGGCGGGCGGCGCGAACGCGTATCTGACGATGCT GACCGTTGCGATGGCGGTCGTGCTTTTCGCGTTGCTCGCGCTGCGCCGGCACATTCCGCGCTTGCGCCGCGGCGGGCTGC CGGCGAGCGACGAGCTCGCGCGCGCGGCCCCCTGA
Upstream 100 bases:
>100_bases GAGGACATTCAGGAGACGACATGAAGCACACCCCGACCCCGTGTTTCGCCGCGGCGCGCCGCCGCATCCGCCGCTCGAGC GGCGCGCGCCGGAGGCTCGC
Downstream 100 bases:
>100_bases CGTTCCGACGCTTCGCCGCCCGCCCGCGTGCGTGTGTGCGGCGGGCGCGCGCTACAGCGTCGTGCGCACGTGCCAGAGCT CGGGGAACAGCACGACGTCG
Product: 4-hydroxybenzoate transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSARRGSAPLAVDIGATLDHGPFTAMQRVAVLLAAFSIVLDGFDSQLIGFAIPVLIKEWGITRDAFAPAVAAGLFGMGVG SACAGLFADRFGRRWAIIGSVFVFGAATCAIGFAPNVATIAALRFFAGLGIGGALPTAATMTAEYTPARRRTMMVTATIV CVPAGGMLAGLFAHEVLPAYGWRGLFWLGGALPFALGLLLVRALPESPRYLARDPARWRELGALLARMGRPVAAGTAFTD LAEARAHEGQRRGVRALFSAAYARDTIALWCAFCMCLLAVYSAFSWLPTMLTSQGLSVSVAGSGLTAYNLGGVVGALGCA FAIGRFGSRWPLAFCCAGGAASAAWLLGVDAASHTGWLIAGLAAHGFFVNAVQSTMYALCTYIYPTPVRATGAASAVAFG RVGAILSAFAGAYVISAGGANAYLTMLTVAMAVVLFALLALRRHIPRLRRGGLPASDELARAAP
Sequences:
>Translated_464_residues MSARRGSAPLAVDIGATLDHGPFTAMQRVAVLLAAFSIVLDGFDSQLIGFAIPVLIKEWGITRDAFAPAVAAGLFGMGVG SACAGLFADRFGRRWAIIGSVFVFGAATCAIGFAPNVATIAALRFFAGLGIGGALPTAATMTAEYTPARRRTMMVTATIV CVPAGGMLAGLFAHEVLPAYGWRGLFWLGGALPFALGLLLVRALPESPRYLARDPARWRELGALLARMGRPVAAGTAFTD LAEARAHEGQRRGVRALFSAAYARDTIALWCAFCMCLLAVYSAFSWLPTMLTSQGLSVSVAGSGLTAYNLGGVVGALGCA FAIGRFGSRWPLAFCCAGGAASAAWLLGVDAASHTGWLIAGLAAHGFFVNAVQSTMYALCTYIYPTPVRATGAASAVAFG RVGAILSAFAGAYVISAGGANAYLTMLTVAMAVVLFALLALRRHIPRLRRGGLPASDELARAAP >Mature_463_residues SARRGSAPLAVDIGATLDHGPFTAMQRVAVLLAAFSIVLDGFDSQLIGFAIPVLIKEWGITRDAFAPAVAAGLFGMGVGS ACAGLFADRFGRRWAIIGSVFVFGAATCAIGFAPNVATIAALRFFAGLGIGGALPTAATMTAEYTPARRRTMMVTATIVC VPAGGMLAGLFAHEVLPAYGWRGLFWLGGALPFALGLLLVRALPESPRYLARDPARWRELGALLARMGRPVAAGTAFTDL AEARAHEGQRRGVRALFSAAYARDTIALWCAFCMCLLAVYSAFSWLPTMLTSQGLSVSVAGSGLTAYNLGGVVGALGCAF AIGRFGSRWPLAFCCAGGAASAAWLLGVDAASHTGWLIAGLAAHGFFVNAVQSTMYALCTYIYPTPVRATGAASAVAFGR VGAILSAFAGAYVISAGGANAYLTMLTVAMAVVLFALLALRRHIPRLRRGGLPASDELARAAP
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=412, Percent_Identity=24.7572815533981, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI213021148, Length=435, Percent_Identity=24.5977011494253, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI87081723, Length=338, Percent_Identity=31.6568047337278, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1786229, Length=438, Percent_Identity=24.8858447488584, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87082231, Length=179, Percent_Identity=31.2849162011173, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI87082404, Length=417, Percent_Identity=21.8225419664269, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788068, Length=433, Percent_Identity=23.3256351039261, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI87082159, Length=384, Percent_Identity=26.3020833333333, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788074, Length=376, Percent_Identity=23.6702127659574, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1789207, Length=222, Percent_Identity=28.8288288288288, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI32564663, Length=392, Percent_Identity=27.0408163265306, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI19922874, Length=402, Percent_Identity=22.8855721393035, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47997; Mature: 47866
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARRGSAPLAVDIGATLDHGPFTAMQRVAVLLAAFSIVLDGFDSQLIGFAIPVLIKEWG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC ITRDAFAPAVAAGLFGMGVGSACAGLFADRFGRRWAIIGSVFVFGAATCAIGFAPNVATI CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH AALRFFAGLGIGGALPTAATMTAEYTPARRRTMMVTATIVCVPAGGMLAGLFAHEVLPAY HHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHC GWRGLFWLGGALPFALGLLLVRALPESPRYLARDPARWRELGALLARMGRPVAAGTAFTD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH LAEARAHEGQRRGVRALFSAAYARDTIALWCAFCMCLLAVYSAFSWLPTMLTSQGLSVSV HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE AGSGLTAYNLGGVVGALGCAFAIGRFGSRWPLAFCCAGGAASAAWLLGVDAASHTGWLIA ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHEECCCCCCCCHHHH GLAAHGFFVNAVQSTMYALCTYIYPTPVRATGAASAVAFGRVGAILSAFAGAYVISAGGA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCC NAYLTMLTVAMAVVLFALLALRRHIPRLRRGGLPASDELARAAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC >Mature Secondary Structure SARRGSAPLAVDIGATLDHGPFTAMQRVAVLLAAFSIVLDGFDSQLIGFAIPVLIKEWG CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC ITRDAFAPAVAAGLFGMGVGSACAGLFADRFGRRWAIIGSVFVFGAATCAIGFAPNVATI CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH AALRFFAGLGIGGALPTAATMTAEYTPARRRTMMVTATIVCVPAGGMLAGLFAHEVLPAY HHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHC GWRGLFWLGGALPFALGLLLVRALPESPRYLARDPARWRELGALLARMGRPVAAGTAFTD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH LAEARAHEGQRRGVRALFSAAYARDTIALWCAFCMCLLAVYSAFSWLPTMLTSQGLSVSV HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE AGSGLTAYNLGGVVGALGCAFAIGRFGSRWPLAFCCAGGAASAAWLLGVDAASHTGWLIA ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHEECCCCCCCCHHHH GLAAHGFFVNAVQSTMYALCTYIYPTPVRATGAASAVAFGRVGAILSAFAGAYVISAGGA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCC NAYLTMLTVAMAVVLFALLALRRHIPRLRRGGLPASDELARAAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]