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The map label for this gene is cycA [H]

Identifier: 83718733

GI number: 83718733

Start: 3481988

End: 3482785

Strand: Reverse

Name: cycA [H]

Synonym: BTH_I3036

Alternate gene names: 83718733

Gene position: 3482785-3481988 (Counterclockwise)

Preceding gene: 83719466

Following gene: 83719536

Centisome position: 91.43

GC content: 64.29

Gene sequence:

>798_bases
ATGGGCATCAAGGCTTTCATCGGGGTATTGTACAATACGGCGTATTTGCCGCAGGCGGTGGAAGCGTCGGAGCGCGCTTC
TACGGTAGACTGGGCGCCGTCGTTTTTTGCAGAACCTCACTACTCCCACAAGACGAAACAAGGTGTGCGAATGAATCGAC
TGAGCAAGTCTTTGGTGGTGCTTCAGTTCGCGGTAGCAGGGCTCGCAGGTTTCATGACGGAGGCAAGGGCGGCAGATGCG
GCGAAGCCGGATCTCGACCGAGGCAAGGCAATCGCGACGCAGGTATGCGCGGCATGCCACGGCGTCGACGGCAACAGCGC
GACGGGCTCGTTCCCGAAGCTCGCCGGCCAGCATCCCGATTATCTCGTCAAGCAGTTGCACGATTTCAAGACGCAGCCGG
GCGCGAAAGGACCGGTGCGCGTCAATTCAGTGATGGTCGGATTCGCGAGCGCGCTGAGCGATCAGGACGCGCGCAACGTC
GCCGCCTATTACGGGTCGCAGTCGGCGAAGCCGGGCGCCGCGCGCAACGCGGCCACCGTGCCGCTTGGGCAGAAGATCTA
TCGCGGCGGCATTGCCGAGAAGGGCGTGCCCGCCTGCGCGAGCTGCCACGGGCCGACGGGGCAGGGAATTCCGGTACAGT
ATCCGCGGCTGTCTGGGCAGTGGGCCGATTACACCGTCGCGCAGTTGACCGCGTTCCAGCAGGGCACGCGCGGCAACGAC
GTGATGCGTCAGATCGCGCTGCGGCTGACGGACGGCGAGGTGAAGGCCGTCGCCGATTACATCGCCGGCCTGCACTGA

Upstream 100 bases:

>100_bases
GTGAAGAAGCGGGCTTGATGGAGCAAGAAGGCCATGGGACAGGAGGGCGACGGGCGGCGCAAGCCGCGCGGTGGAAGGCG
GGAGCCCCGAAGTAGCCCTG

Downstream 100 bases:

>100_bases
GCCGATTTCGGTTCGCGAGCCGGATGAACGAGCCGGCCGCCCACGCGGCGGCCGCTAGAACAAGAAAAGGGTGGGGCGCC
GTCGAAGCACGGCCGCCTTG

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGIKAFIGVLYNTAYLPQAVEASERASTVDWAPSFFAEPHYSHKTKQGVRMNRLSKSLVVLQFAVAGLAGFMTEARAADA
AKPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPDYLVKQLHDFKTQPGAKGPVRVNSVMVGFASALSDQDARNV
AAYYGSQSAKPGAARNAATVPLGQKIYRGGIAEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTAFQQGTRGND
VMRQIALRLTDGEVKAVADYIAGLH

Sequences:

>Translated_265_residues
MGIKAFIGVLYNTAYLPQAVEASERASTVDWAPSFFAEPHYSHKTKQGVRMNRLSKSLVVLQFAVAGLAGFMTEARAADA
AKPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPDYLVKQLHDFKTQPGAKGPVRVNSVMVGFASALSDQDARNV
AAYYGSQSAKPGAARNAATVPLGQKIYRGGIAEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTAFQQGTRGND
VMRQIALRLTDGEVKAVADYIAGLH
>Mature_264_residues
GIKAFIGVLYNTAYLPQAVEASERASTVDWAPSFFAEPHYSHKTKQGVRMNRLSKSLVVLQFAVAGLAGFMTEARAADAA
KPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPDYLVKQLHDFKTQPGAKGPVRVNSVMVGFASALSDQDARNVA
AYYGSQSAKPGAARNAATVPLGQKIYRGGIAEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTAFQQGTRGNDV
MRQIALRLTDGEVKAVADYIAGLH

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 27964; Mature: 27833

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GIKAFIGVLYNTAYLPQAVEASERASTVDWAPSFFAEPHYSHKTKQGVRMNRLSKSLVV
CHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHCHHHHHHHHHHHH
LQFAVAGLAGFMTEARAADAAKPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHH
YLVKQLHDFKTQPGAKGPVRVNSVMVGFASALSDQDARNVAAYYGSQSAKPGAARNAATV
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
PLGQKIYRGGIAEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTAFQQGTRGND
CCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
VMRQIALRLTDGEVKAVADYIAGLH
HHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7619830; 6089759 [H]