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The map label for this gene is ccsB [H]

Identifier: 83719536

GI number: 83719536

Start: 3479679

End: 3481838

Strand: Reverse

Name: ccsB [H]

Synonym: BTH_I3035

Alternate gene names: 83719536

Gene position: 3481838-3479679 (Counterclockwise)

Preceding gene: 83718733

Following gene: 83720490

Centisome position: 91.41

GC content: 66.06

Gene sequence:

>2160_bases
TTGCAGTCGAGAGCGGGGCAGTCCGCGGTCAGGCGCGCGGTCGAGTTGTTGAGCTCGATGCGTTTTGCGATCGCGCTGCT
CGTCGTGCTGTCGATCGCGAGCATCATCGGCACGGTCCTCACGCAGGACGACCCGTACCCTAACTACGTCAATCAGTTCG
GGCCATTCTGGGCCGACATCTTCCGCTCGCTGAGCCTCTATACGGTCTACAGCGCGTGGTGGTTCATGCTGATCCTGATC
TTCCTCGTCGTGTCGATCTCGCTGTGCGTGATCCGCAACGCGCCGAAAATGCTCGCCGATGCGAGAAGCTGGAAGGACAA
GGTCCGCGAAGGCAGCCTGCGCGCATTCCATCACAAGGCCGAGTTCGCGGTCGCGGGCGATCGCGCGCGCGCGACGCAGA
CCGTCGCCGCGTTCGTCGCGAAGGCGGGCTACCGGCACGTCGTGCGCGAGACGGACGGTGCGACGCTTGTCGCCGCGAAG
CGCGGCGCGATGACGAAATTCGGCTACATCGCCGCGCACCTCGCGATCGTCGTGATTTGCGTGGGCGGCCTGATCGACAG
CAACCTGCCGATCAAATTCCAGATGTGGATGTTCGGCAAGAGCCCCGTCAACACGAGCGCGACGATCAGCGAGATCGGGC
CCGAGCACCGGCTGTCCGCGTCGAACCCGACGTTCCGCGGCTATGCGTGGGTGCCGGAGGGCCAGTACGTGTCGACCGCG
ATCCTCAATCAGCCGACGGGCTCGCTGATCCAGGATCTGCCGTTTTCGATCCAGCTCGAGAAATTCATCGTCGACTATTA
CTCGACCGGCATGCCGAAGCTCTTCGCGAGCGACATCGTCGTGATCGACCGTAAGACCGGCAAGCGAATCCCCGCGCGCG
TCGAGGTCAACAAGCCGTTCACGTACAAGGGCGTGTCGATCTATCAATCGAGCTTCCAGGACGGCGGCTCGCTGATGGAA
ATGACCGCGTATCCGATGACGGGCTCGAGCGCCGCGACGTTCCCGTTCAAGGGCACGATCGGCAATTCGGTGCCGCTCCC
GGCGGCGGGCGCCGACGGCGAGACCGTCGAGTTCTCCGATTTCCGCGCGATCAACGTCGAGAACATCACCGATGCCAGCG
GCAAGACCGACGCGCGCGGTGTCGCGGCACACCGCTCGATCAAGGAGATCTTCGACGAGCGGCTCGGCTCCGGCGCAAAG
ACGTCGCGGCCCGTCGAACTGCACAACATCGGGCCGTCGGTCCAGTACAAGGTGCGCGGCAAGGATGGCCAGGCGCGCGA
ATTCAACAACTACATGCTGCCCGTCGACATGGGCGGCGAGCGCGTGTTCCTCGCCGGCGTGCGCGCAAGCCCGAACGACC
CGTTCCGCTATTTGCGGATTCCTGCCGACAGCAGCGACAGCGTCGGCGAATGGATGCGGCTGCGCGCGGCGCTCGAAGAT
CCGGCCGTGCGCAACGAGGCGGCGCGCCGCTTCGCGCAACATTCGCTCGGCGCGGGCGACGCCGCGCTGCGCGGCCGGCT
CGAAGACAGCGCGCAGCGTGTCCTGACCCTGTTCGCCGGCGCGGACGGCAGCATCGGCCGCGGCCCGGACGGCAATCCGA
TCGGCGGCTTCCAGGCGGTCGCGACGTTCATCGACCGCTCGGTGCCGAAGGACGAGAAGGAGAAGGCCGCCGCGCTGCTG
CTGCGGATGCTCGAAGGCTCGATGTGGGATGTCTGGCAGATCGCGCGCGAGCGAGCGAACGAGCCGCCCGTGCAGCAGGC
GCAGGATACGGTGCGCTTCGTGCAGAACGCGATCAACGCGCTGTCGGACAGTTTCCTGTATGGCGCGCCCGTCTATCTGA
AGCTCGATTCGTTCAAGCAGGTGCAGGCATCGGTGTTCCAGCTGACGCGCGCGCCCGGCAAGAATCTGGTGTATCTTGGC
AGCCTGCTGCTCGTCGCCGGCATCTTCTCGATGTTCTACGTGCGCGAGCGACGCCTCTGGTTCTGGCTCAAGGATACGGG
CGCGGGCGTCAGCGTGCTGATGGCGATGTCCACCGCGCGCAAGACGTTCGACTTCGAAAAGGAATTCGTGCGCACGCGCG
ACGCGGCCGGGGCCGCGCTGGGCGCGCCGCCAGCCTCCCGCGCGCCCGACGGCGCCGGCACCAAGGACTCGACTCGGTAA

Upstream 100 bases:

>100_bases
GGCCGCTAGAACAAGAAAAGGGTGGGGCGCCGTCGAAGCACGGCCGCCTTGCCCTTTTTTGTTGTGAGTTGGAGTTTGAA
TGAGCGTTACCACGTCGGGG

Downstream 100 bases:

>100_bases
CATCATGGATCTGACCCAAGTTTCGTCATCCCGCGCGCCGCGCGCTTCCGACGCGGCCGAGCCGGCGTTTTTCGACGACC
GGCCGTTCCTGCGCCGCCTG

Product: cytochrome c assembly family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MQSRAGQSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSAWWFMLILI
FLVVSISLCVIRNAPKMLADARSWKDKVREGSLRAFHHKAEFAVAGDRARATQTVAAFVAKAGYRHVVRETDGATLVAAK
RGAMTKFGYIAAHLAIVVICVGGLIDSNLPIKFQMWMFGKSPVNTSATISEIGPEHRLSASNPTFRGYAWVPEGQYVSTA
ILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVIDRKTGKRIPARVEVNKPFTYKGVSIYQSSFQDGGSLME
MTAYPMTGSSAATFPFKGTIGNSVPLPAAGADGETVEFSDFRAINVENITDASGKTDARGVAAHRSIKEIFDERLGSGAK
TSRPVELHNIGPSVQYKVRGKDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSSDSVGEWMRLRAALED
PAVRNEAARRFAQHSLGAGDAALRGRLEDSAQRVLTLFAGADGSIGRGPDGNPIGGFQAVATFIDRSVPKDEKEKAAALL
LRMLEGSMWDVWQIARERANEPPVQQAQDTVRFVQNAINALSDSFLYGAPVYLKLDSFKQVQASVFQLTRAPGKNLVYLG
SLLLVAGIFSMFYVRERRLWFWLKDTGAGVSVLMAMSTARKTFDFEKEFVRTRDAAGAALGAPPASRAPDGAGTKDSTR

Sequences:

>Translated_719_residues
MQSRAGQSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSAWWFMLILI
FLVVSISLCVIRNAPKMLADARSWKDKVREGSLRAFHHKAEFAVAGDRARATQTVAAFVAKAGYRHVVRETDGATLVAAK
RGAMTKFGYIAAHLAIVVICVGGLIDSNLPIKFQMWMFGKSPVNTSATISEIGPEHRLSASNPTFRGYAWVPEGQYVSTA
ILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVIDRKTGKRIPARVEVNKPFTYKGVSIYQSSFQDGGSLME
MTAYPMTGSSAATFPFKGTIGNSVPLPAAGADGETVEFSDFRAINVENITDASGKTDARGVAAHRSIKEIFDERLGSGAK
TSRPVELHNIGPSVQYKVRGKDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSSDSVGEWMRLRAALED
PAVRNEAARRFAQHSLGAGDAALRGRLEDSAQRVLTLFAGADGSIGRGPDGNPIGGFQAVATFIDRSVPKDEKEKAAALL
LRMLEGSMWDVWQIARERANEPPVQQAQDTVRFVQNAINALSDSFLYGAPVYLKLDSFKQVQASVFQLTRAPGKNLVYLG
SLLLVAGIFSMFYVRERRLWFWLKDTGAGVSVLMAMSTARKTFDFEKEFVRTRDAAGAALGAPPASRAPDGAGTKDSTR
>Mature_719_residues
MQSRAGQSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSAWWFMLILI
FLVVSISLCVIRNAPKMLADARSWKDKVREGSLRAFHHKAEFAVAGDRARATQTVAAFVAKAGYRHVVRETDGATLVAAK
RGAMTKFGYIAAHLAIVVICVGGLIDSNLPIKFQMWMFGKSPVNTSATISEIGPEHRLSASNPTFRGYAWVPEGQYVSTA
ILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVIDRKTGKRIPARVEVNKPFTYKGVSIYQSSFQDGGSLME
MTAYPMTGSSAATFPFKGTIGNSVPLPAAGADGETVEFSDFRAINVENITDASGKTDARGVAAHRSIKEIFDERLGSGAK
TSRPVELHNIGPSVQYKVRGKDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSSDSVGEWMRLRAALED
PAVRNEAARRFAQHSLGAGDAALRGRLEDSAQRVLTLFAGADGSIGRGPDGNPIGGFQAVATFIDRSVPKDEKEKAAALL
LRMLEGSMWDVWQIARERANEPPVQQAQDTVRFVQNAINALSDSFLYGAPVYLKLDSFKQVQASVFQLTRAPGKNLVYLG
SLLLVAGIFSMFYVRERRLWFWLKDTGAGVSVLMAMSTARKTFDFEKEFVRTRDAAGAALGAPPASRAPDGAGTKDSTR

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 78607; Mature: 78607

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRAGQSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHH
FRSLSLYTVYSAWWFMLILIFLVVSISLCVIRNAPKMLADARSWKDKVREGSLRAFHHKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHC
EFAVAGDRARATQTVAAFVAKAGYRHVVRETDGATLVAAKRGAMTKFGYIAAHLAIVVIC
CEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
VGGLIDSNLPIKFQMWMFGKSPVNTSATISEIGPEHRLSASNPTFRGYAWVPEGQYVSTA
HHHHHCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCEEEHH
ILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVIDRKTGKRIPARVEVNKPF
HHCCCCHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCEEECCCCC
TYKGVSIYQSSFQDGGSLMEMTAYPMTGSSAATFPFKGTIGNSVPLPAAGADGETVEFSD
EECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
FRAINVENITDASGKTDARGVAAHRSIKEIFDERLGSGAKTSRPVELHNIGPSVQYKVRG
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEC
KDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSSDSVGEWMRLRAALED
CCCCCEECCCEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
PAVRNEAARRFAQHSLGAGDAALRGRLEDSAQRVLTLFAGADGSIGRGPDGNPIGGFQAV
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
ATFIDRSVPKDEKEKAAALLLRMLEGSMWDVWQIARERANEPPVQQAQDTVRFVQNAINA
HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSDSFLYGAPVYLKLDSFKQVQASVFQLTRAPGKNLVYLGSLLLVAGIFSMFYVRERRLW
HHCCHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEE
FWLKDTGAGVSVLMAMSTARKTFDFEKEFVRTRDAAGAALGAPPASRAPDGAGTKDSTR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSRAGQSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHH
FRSLSLYTVYSAWWFMLILIFLVVSISLCVIRNAPKMLADARSWKDKVREGSLRAFHHKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHC
EFAVAGDRARATQTVAAFVAKAGYRHVVRETDGATLVAAKRGAMTKFGYIAAHLAIVVIC
CEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
VGGLIDSNLPIKFQMWMFGKSPVNTSATISEIGPEHRLSASNPTFRGYAWVPEGQYVSTA
HHHHHCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCEEEHH
ILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVIDRKTGKRIPARVEVNKPF
HHCCCCHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCEEECCCCC
TYKGVSIYQSSFQDGGSLMEMTAYPMTGSSAATFPFKGTIGNSVPLPAAGADGETVEFSD
EECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
FRAINVENITDASGKTDARGVAAHRSIKEIFDERLGSGAKTSRPVELHNIGPSVQYKVRG
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEC
KDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSSDSVGEWMRLRAALED
CCCCCEECCCEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
PAVRNEAARRFAQHSLGAGDAALRGRLEDSAQRVLTLFAGADGSIGRGPDGNPIGGFQAV
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
ATFIDRSVPKDEKEKAAALLLRMLEGSMWDVWQIARERANEPPVQQAQDTVRFVQNAINA
HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSDSFLYGAPVYLKLDSFKQVQASVFQLTRAPGKNLVYLGSLLLVAGIFSMFYVRERRLW
HHCCHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEE
FWLKDTGAGVSVLMAMSTARKTFDFEKEFVRTRDAAGAALGAPPASRAPDGAGTKDSTR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA