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The map label for this gene is dsbD [H]

Identifier: 83719466

GI number: 83719466

Start: 3484988

End: 3486871

Strand: Reverse

Name: dsbD [H]

Synonym: BTH_I3039

Alternate gene names: 83719466

Gene position: 3486871-3484988 (Counterclockwise)

Preceding gene: 83718652

Following gene: 83718733

Centisome position: 91.54

GC content: 68.47

Gene sequence:

>1884_bases
ATGTTTAACCGTAATCCGCTTCACGCGCAGTCCCGCTTCCGTTTCCTGCTCGCCGTCGTCGCGATGCTCGGCGTGCTGTT
CGGCACGTCGTTCGCGGCGCGCGCGGCGGACGACTTTCTCGACCCCGCAGTTGCGTTCAAATTCAGCGCGAGCGAGGCGC
CGGGCCAGGTCGACATTCATTTCAAGATCGCCGACGGCTATTACATGTATCGCGAGCGCTTCGCGTTCGCGGTGAAAAGC
GGCTCGGCCACGCTCGGCGAGCCGCAACTGCCGGCCGGGCACGTGAAGTTCGATCCGACGTTCCAGAAGAACGTCGAAAC
CTACCGCGGCGATCTGACGATCCGCCTGCCGATCAAGCAGGCGTCGGGGCCGTTCGAGCTCGCGGTGACGTCGCAGGGCT
GTGCGGACGAAGGAATCTGCTATCCGCCCGCCGAGCACGTCGCGCGAATCGGAGGCGCGGCGCTCGGCGCAGCCGGCGCG
ACGCCCGTCGCGGCCGCTGCCGGCGCGGATTCCTCCGCGACGGACGGCGGTCACTGGTACGAACGCGTGACGAGCGCCGA
CTACGCGCGCTCGCTGCTTGAAGGCCATGGATTCCTGACGATCATCGCGCTCTATTTCGTGGCCGGCATGGTGCTGAGCC
TGCTGCCGTGTTCGTATCCGATGATCCCGATCCTGTCGGCGATCATCGTCGGCGAAGGCGCGCATGCGACGCGCGCGCGT
GCGTTCGCGCTGTCGCTCACCTATGTGATCGGCATGGCGCTCGTCTATACGGTGCTCGGCGTCGCGGCCGCGCTCGTCGG
GCAGAGTCTCGGCGCTTGGCTGCAGAACCCGTGGGTGCTCGGCGCGTTCGCGCTGCTGCTCACCGTGTTCGCGCTGCTGC
TGATCGGCGGCATCGACATCACGTTGCCGCAGCGCTGGCAGAACGGCGCCGCGCGGACGACCGGGCCGCGCAGGGGCGGA
CGCTTCGTGGCCGTCGCAACGATGGGCGCGTTGTCCGCGCTCGTCGTCGGCGCGTGCATGACCGCGCCGCTCTTCGCCGT
GCTCGCATTCATCGCGCATACGGGCAACGCATTCCTCGGCGGTGCCGCGCTCTTTTCGATGGGGATCGGCCTCGGCGTGC
CGCTCCTCGTTATCGGCATCGGCGCGGGAACGCTGCTGCCCCGCGCCGGCGCGTGGATGGACGGCGTGAAGGTATTTTTT
GGCGTCGTGTTACTCGCCGCTGCGCTGTGGATCGTCTGGCCGGTGCTGAACGCCGCGTCGCAGCTCGGTCTGGGGGCGTT
GTGGTTGTTGATCGCCGCCGCCGCGCTTGGGCTCTTCACGCCGCATTCGGGCTCGTCTTCGATCTGGCGACGGCTCGGGC
GCGGGCTCGGCGCCGCGCTCGCGATCTGGGCGGCGACGCTCCTCATCGGTCTCGCGGCGGGGTCGACCGATCCGTTGCGT
CCCCTCGCGGTGCTCGCGGCGCGCGCGGCGCCGAGCAACGGCGTCGCCAATGCCGGCGCTGCCGCGCACGAGGGGCCGGT
GTTCGCGCCGGTGCGCTCGATCGCGGAGCTCGACGAGATCGTGAAGTCGTCGACTCAGCCGGTGATGCTCGATTTCTATG
CGGACTGGTGCGTGAGTTGCAAGGAGATGGAGCAGCTGACGTTCACCGACGCGCGCGTCGGCGCGCGGCTTTCGCAGATG
CGTCTCGTGCGCGCGGACGTGACCGCGAACACGCCCGACGATCAGGCGCTCCTGAAGCATTTCGGGCTATTCGGGCCGCC
CGGCATCATCGTGTTCGATTCGAACGGGCAAGAACGCGGGCGCGTCGTCGGTTATCAGTCGGCCGACCGTTTCCTGCGCG
GTCTCGAACGGATGTCGTTGCCGGCCGCGTCGACGGCATCGTGA

Upstream 100 bases:

>100_bases
TCGCACCACCCGTACGACGTGCCGGAGATCGTCTCTTGGCAGGCGGCGGCGTCCGCGGCATACGGCCAGTGGGTCGCCAC
CGAAACTCAGCGTCTATTTC

Downstream 100 bases:

>100_bases
TGTCGGCGCCGTGACGGCTGGGCGCGGACGCCGCAGATGCCGCGGATTGTCGATGCGCCGCGCGCGAACGCGCGGCGTGC
GTTTCCCGGCGGCGAATCGT

Product: thiol:disulfide interchange protein DsbD

Products: NA

Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MFNRNPLHAQSRFRFLLAVVAMLGVLFGTSFAARAADDFLDPAVAFKFSASEAPGQVDIHFKIADGYYMYRERFAFAVKS
GSATLGEPQLPAGHVKFDPTFQKNVETYRGDLTIRLPIKQASGPFELAVTSQGCADEGICYPPAEHVARIGGAALGAAGA
TPVAAAAGADSSATDGGHWYERVTSADYARSLLEGHGFLTIIALYFVAGMVLSLLPCSYPMIPILSAIIVGEGAHATRAR
AFALSLTYVIGMALVYTVLGVAAALVGQSLGAWLQNPWVLGAFALLLTVFALLLIGGIDITLPQRWQNGAARTTGPRRGG
RFVAVATMGALSALVVGACMTAPLFAVLAFIAHTGNAFLGGAALFSMGIGLGVPLLVIGIGAGTLLPRAGAWMDGVKVFF
GVVLLAAALWIVWPVLNAASQLGLGALWLLIAAAALGLFTPHSGSSSIWRRLGRGLGAALAIWAATLLIGLAAGSTDPLR
PLAVLAARAAPSNGVANAGAAAHEGPVFAPVRSIAELDEIVKSSTQPVMLDFYADWCVSCKEMEQLTFTDARVGARLSQM
RLVRADVTANTPDDQALLKHFGLFGPPGIIVFDSNGQERGRVVGYQSADRFLRGLERMSLPAASTAS

Sequences:

>Translated_627_residues
MFNRNPLHAQSRFRFLLAVVAMLGVLFGTSFAARAADDFLDPAVAFKFSASEAPGQVDIHFKIADGYYMYRERFAFAVKS
GSATLGEPQLPAGHVKFDPTFQKNVETYRGDLTIRLPIKQASGPFELAVTSQGCADEGICYPPAEHVARIGGAALGAAGA
TPVAAAAGADSSATDGGHWYERVTSADYARSLLEGHGFLTIIALYFVAGMVLSLLPCSYPMIPILSAIIVGEGAHATRAR
AFALSLTYVIGMALVYTVLGVAAALVGQSLGAWLQNPWVLGAFALLLTVFALLLIGGIDITLPQRWQNGAARTTGPRRGG
RFVAVATMGALSALVVGACMTAPLFAVLAFIAHTGNAFLGGAALFSMGIGLGVPLLVIGIGAGTLLPRAGAWMDGVKVFF
GVVLLAAALWIVWPVLNAASQLGLGALWLLIAAAALGLFTPHSGSSSIWRRLGRGLGAALAIWAATLLIGLAAGSTDPLR
PLAVLAARAAPSNGVANAGAAAHEGPVFAPVRSIAELDEIVKSSTQPVMLDFYADWCVSCKEMEQLTFTDARVGARLSQM
RLVRADVTANTPDDQALLKHFGLFGPPGIIVFDSNGQERGRVVGYQSADRFLRGLERMSLPAASTAS
>Mature_627_residues
MFNRNPLHAQSRFRFLLAVVAMLGVLFGTSFAARAADDFLDPAVAFKFSASEAPGQVDIHFKIADGYYMYRERFAFAVKS
GSATLGEPQLPAGHVKFDPTFQKNVETYRGDLTIRLPIKQASGPFELAVTSQGCADEGICYPPAEHVARIGGAALGAAGA
TPVAAAAGADSSATDGGHWYERVTSADYARSLLEGHGFLTIIALYFVAGMVLSLLPCSYPMIPILSAIIVGEGAHATRAR
AFALSLTYVIGMALVYTVLGVAAALVGQSLGAWLQNPWVLGAFALLLTVFALLLIGGIDITLPQRWQNGAARTTGPRRGG
RFVAVATMGALSALVVGACMTAPLFAVLAFIAHTGNAFLGGAALFSMGIGLGVPLLVIGIGAGTLLPRAGAWMDGVKVFF
GVVLLAAALWIVWPVLNAASQLGLGALWLLIAAAALGLFTPHSGSSSIWRRLGRGLGAALAIWAATLLIGLAAGSTDPLR
PLAVLAARAAPSNGVANAGAAAHEGPVFAPVRSIAELDEIVKSSTQPVMLDFYADWCVSCKEMEQLTFTDARVGARLSQM
RLVRADVTANTPDDQALLKHFGLFGPPGIIVFDSNGQERGRVVGYQSADRFLRGLERMSLPAASTAS

Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a

COG id: COG4232

COG function: function code OC; Thiol:disulfide interchange protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1790578, Length=613, Percent_Identity=32.626427406199, Blast_Score=300, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834
- InterPro:   IPR022910
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]

EC number: =1.8.1.8 [H]

Molecular weight: Translated: 65467; Mature: 65467

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRNPLHAQSRFRFLLAVVAMLGVLFGTSFAARAADDFLDPAVAFKFSASEAPGQVDIH
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEEEEECCCCCCEEEEE
FKIADGYYMYRERFAFAVKSGSATLGEPQLPAGHVKFDPTFQKNVETYRGDLTIRLPIKQ
EEECCCHHHHHHHHHHHEECCCCCCCCCCCCCCCEEECCCHHHCHHHHCCCEEEEEEECC
ASGPFELAVTSQGCADEGICYPPAEHVARIGGAALGAAGATPVAAAAGADSSATDGGHWY
CCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCCCHHHH
ERVTSADYARSLLEGHGFLTIIALYFVAGMVLSLLPCSYPMIPILSAIIVGEGAHATRAR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH
AFALSLTYVIGMALVYTVLGVAAALVGQSLGAWLQNPWVLGAFALLLTVFALLLIGGIDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCE
TLPQRWQNGAARTTGPRRGGRFVAVATMGALSALVVGACMTAPLFAVLAFIAHTGNAFLG
ECCHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
GAALFSMGIGLGVPLLVIGIGAGTLLPRAGAWMDGVKVFFGVVLLAAALWIVWPVLNAAS
HHHHHHHHHCCCCHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGLGALWLLIAAAALGLFTPHSGSSSIWRRLGRGLGAALAIWAATLLIGLAAGSTDPLR
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
PLAVLAARAAPSNGVANAGAAAHEGPVFAPVRSIAELDEIVKSSTQPVMLDFYADWCVSC
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCH
KEMEQLTFTDARVGARLSQMRLVRADVTANTPDDQALLKHFGLFGPPGIIVFDSNGQERG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCC
RVVGYQSADRFLRGLERMSLPAASTAS
CEECHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFNRNPLHAQSRFRFLLAVVAMLGVLFGTSFAARAADDFLDPAVAFKFSASEAPGQVDIH
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEEEEECCCCCCEEEEE
FKIADGYYMYRERFAFAVKSGSATLGEPQLPAGHVKFDPTFQKNVETYRGDLTIRLPIKQ
EEECCCHHHHHHHHHHHEECCCCCCCCCCCCCCCEEECCCHHHCHHHHCCCEEEEEEECC
ASGPFELAVTSQGCADEGICYPPAEHVARIGGAALGAAGATPVAAAAGADSSATDGGHWY
CCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCCCHHHH
ERVTSADYARSLLEGHGFLTIIALYFVAGMVLSLLPCSYPMIPILSAIIVGEGAHATRAR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH
AFALSLTYVIGMALVYTVLGVAAALVGQSLGAWLQNPWVLGAFALLLTVFALLLIGGIDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCE
TLPQRWQNGAARTTGPRRGGRFVAVATMGALSALVVGACMTAPLFAVLAFIAHTGNAFLG
ECCHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
GAALFSMGIGLGVPLLVIGIGAGTLLPRAGAWMDGVKVFFGVVLLAAALWIVWPVLNAAS
HHHHHHHHHCCCCHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGLGALWLLIAAAALGLFTPHSGSSSIWRRLGRGLGAALAIWAATLLIGLAAGSTDPLR
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
PLAVLAARAAPSNGVANAGAAAHEGPVFAPVRSIAELDEIVKSSTQPVMLDFYADWCVSC
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCH
KEMEQLTFTDARVGARLSQMRLVRADVTANTPDDQALLKHFGLFGPPGIIVFDSNGQERG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCC
RVVGYQSADRFLRGLERMSLPAASTAS
CEECHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]