| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is tag [H]
Identifier: 83718447
GI number: 83718447
Start: 3639427
End: 3640035
Strand: Direct
Name: tag [H]
Synonym: BTH_I3193
Alternate gene names: 83718447
Gene position: 3639427-3640035 (Clockwise)
Preceding gene: 83721161
Following gene: 83719673
Centisome position: 95.54
GC content: 63.71
Gene sequence:
>609_bases ATGCCGAAACAGGGACGCTGCAGTTGGGTAAAAACCGAAGCGGACGCTCACTATCACGATACCGAATGGGGCGTGCCGTC GCACGACGACCGGCATCTATTCGAGATGCTCGTGCTCGAAGGCGCGCAGGCCGGCCTGTCGTGGTCGACGATTTTGAACA AGCGCGCCGGCTACCGCGCGGCGTTTGCCGATTTCGACGTCGACAAGGTCGCCGGCTTCACGCCAAAGCGGATCGACGAG CTGGTGCTCGATGCGAGCATCGTGCGCAACCGCGCGAAGATCGAAGCGGCCGTCGCGAACGCGCGCGCGGTCCAGCAGAT TCGCGCGGAACATGGCTCGCTTGCCGCGTTCCTGTGGTCATTCGTCGATCATGCGCCGCGGCAGAACGCATGGGCGTCAT ACCGCGAAGCGCCGGCGTCAACCGAGCGTTCGGACGCGCTCAGCAAGGCGCTCAAGCGCTATGGCTGCAAGTTCGTCGGC TCGACGATCTGCTATGCGCTAATGCAGGCGACGGGCATGGTCAACGATCACGAAAGAACCTGCCCGTGTCATGCGCGCTG CGCGGCGCTCGGCGAGAAGGCGGTCAAAAAGAGAAAGCCGGCGACGTGA
Upstream 100 bases:
>100_bases TAACCGCAACGGTTCGCCGCGCCCATCGGCCGAACGGCCAGGCTTGCGCGCCCTCGCCGATCCGTTATGCTGACGCGACC AGATCGACGGAACTTGCGAG
Downstream 100 bases:
>100_bases TCTGAAAGTCCTGCTCCGCCGCGGCGATCGGCGTCGCCGCGACGGGCGGCCGAATGCGAATGGCGGCGCTCGGCATGCGC GCGGCGGCAGGCATTCGCTT
Product: DNA-3-methyladenine glycosidase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPKQGRCSWVKTEADAHYHDTEWGVPSHDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRAAFADFDVDKVAGFTPKRIDE LVLDASIVRNRAKIEAAVANARAVQQIRAEHGSLAAFLWSFVDHAPRQNAWASYREAPASTERSDALSKALKRYGCKFVG STICYALMQATGMVNDHERTCPCHARCAALGEKAVKKRKPAT
Sequences:
>Translated_202_residues MPKQGRCSWVKTEADAHYHDTEWGVPSHDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRAAFADFDVDKVAGFTPKRIDE LVLDASIVRNRAKIEAAVANARAVQQIRAEHGSLAAFLWSFVDHAPRQNAWASYREAPASTERSDALSKALKRYGCKFVG STICYALMQATGMVNDHERTCPCHARCAALGEKAVKKRKPAT >Mature_201_residues PKQGRCSWVKTEADAHYHDTEWGVPSHDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRAAFADFDVDKVAGFTPKRIDEL VLDASIVRNRAKIEAAVANARAVQQIRAEHGSLAAFLWSFVDHAPRQNAWASYREAPASTERSDALSKALKRYGCKFVGS TICYALMQATGMVNDHERTCPCHARCAALGEKAVKKRKPAT
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=180, Percent_Identity=51.6666666666667, Blast_Score=192, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 22389; Mature: 22257
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQGRCSWVKTEADAHYHDTEWGVPSHDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRA CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH AFADFDVDKVAGFTPKRIDELVLDASIVRNRAKIEAAVANARAVQQIRAEHGSLAAFLWS HHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVDHAPRQNAWASYREAPASTERSDALSKALKRYGCKFVGSTICYALMQATGMVNDHERT HHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC CPCHARCAALGEKAVKKRKPAT CCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PKQGRCSWVKTEADAHYHDTEWGVPSHDDRHLFEMLVLEGAQAGLSWSTILNKRAGYRA CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH AFADFDVDKVAGFTPKRIDELVLDASIVRNRAKIEAAVANARAVQQIRAEHGSLAAFLWS HHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVDHAPRQNAWASYREAPASTERSDALSKALKRYGCKFVGSTICYALMQATGMVNDHERT HHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC CPCHARCAALGEKAVKKRKPAT CCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]