| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83594959
Identifier: 83594959
GI number: 83594959
Start: 4170482
End: 4171045
Strand: Reverse
Name: 83594959
Synonym: Rru_A3630
Alternate gene names: NA
Gene position: 4171045-4170482 (Counterclockwise)
Preceding gene: 83594960
Following gene: 83594958
Centisome position: 95.82
GC content: 67.55
Gene sequence:
>564_bases ATGTCGTGGTCTAGACGCCAGGCCCTTGTCCTTCTCGCCGGGGCCCTGGTCCCGGCGGGCTGCGGCTTCCGGCCGATGCT GGCCGATCGCCCCGGCGCCGCCGGCCGTGGCGGGGCCTCGGGCGCCTTGGCCGGGATCTATGTCCATTCCGTGACCTATT CCAAGGAAGAGGATGCGCGCTTCGGTCAGGAAATCCGCAATGCCCTGATCGATCGCCTTGGCCTTCCCGATCAACCGACC TATGGGCTGACCCTGGTGGGCAGCTTGATCCGGCGCAGCTCGGGCATCACCAAGAGGGACCGGACCACCCGCTACACCAT GAGCGCCTCGATCACCTTCCAGCTGCGCGCCCTTGATCGCGCCGGCGTGCAGCCGCCCAAGCCGCTGCTGTCGGGAACCG AGACCTCATGGGCGGCCTATGACGTGATCGGCTCGCCCTTCGCCAACGAGATGAACGAGCGCGACGCGGTCAGCCGCACC GCCGAACAGATCGCCGATCAGCTTTACACCCGCCTTGGCGCCTATTTCTCGCAAGCCCCGGCTCCGGCCGGCCGGGTTCT TTAG
Upstream 100 bases:
>100_bases GAAGATGCCGAGGCCGCCGCCCTGGCCCTGCCCACCGTTCTTGCCCAGCTTGCCGGGGCCGCGCCGCGCAAGGTTATCGT CGTGCCCAACAGGATCATCA
Downstream 100 bases:
>100_bases CCGCGCCCGTGAAACTGACCGGCCAAGCCATCGACGGCTTCCTGCGCAAGCCCGATCCGAAAATCCGCTGCGTGCTGGTT TATGGCCCCGACGAGGGGCT
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDARFGQEIRNALIDRLGLPDQPT YGLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDRAGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRT AEQIADQLYTRLGAYFSQAPAPAGRVL
Sequences:
>Translated_187_residues MSWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDARFGQEIRNALIDRLGLPDQPT YGLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDRAGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRT AEQIADQLYTRLGAYFSQAPAPAGRVL >Mature_186_residues SWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDARFGQEIRNALIDRLGLPDQPTY GLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDRAGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRTA EQIADQLYTRLGAYFSQAPAPAGRVL
Specific function: Unknown
COG id: COG5468
COG function: function code S; Predicted secreted (periplasmic) protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20089; Mature: 19958
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDAR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCHHHHH FGQEIRNALIDRLGLPDQPTYGLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEHHH AGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRTAEQIADQLYTRLGAYFSQAP CCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APAGRVL CCCCCCC >Mature Secondary Structure SWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDAR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCHHHHH FGQEIRNALIDRLGLPDQPTYGLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEHHH AGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRTAEQIADQLYTRLGAYFSQAP CCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APAGRVL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA