| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594815
Identifier: 83594815
GI number: 83594815
Start: 4011827
End: 4012207
Strand: Direct
Name: 83594815
Synonym: Rru_A3486
Alternate gene names: NA
Gene position: 4011827-4012207 (Clockwise)
Preceding gene: 83594813
Following gene: 83594816
Centisome position: 92.17
GC content: 64.57
Gene sequence:
>381_bases TTGGAAAGCCCCCTTCTCCAGGCGTTCCCGAACGCGGTCGCCGCGCCGACACGCATCGTCATCGCTTTCTTTCTCACGCC TTCGGATACCGCCATGCAGACCCTGAGCGCCCTTCTGCCTATTTTCCTCACCGTCTTCCTGGCCGAACTTGGCGACAAGA CCCAGCTTGCCACCATGCTCTACGCCTCGGGTGGCCAGTCGCGCCCTTTGGCGATCTTCATCGCCGCCTCGGCCGCCCTG GTGCTGTCGACGGCCCTGGCGGTTTTCGTCGGCGCGATGATGACCCGCTATGTCGAGGCCCTGCCCCTCAAGCTGATCGC CGGCGTCGGCTTCATCGTCATCGGCTCGTGGACCGTCTTCCAACACTACCGCGGCGCCTGA
Upstream 100 bases:
>100_bases TGGATAAGCGTCACGCGACCCGCCCGCCGGCCCCCGTGGCGCAACCGCTTGGCTTGCGCCCCCCCGGGGGCTGACTGTAA GGTTCGCCGGCGTCGGGCCC
Downstream 100 bases:
>100_bases CCGGGCCGCGCGCCCCGCGCCCCGCGCCGCCGACATCCCTGGCCTTCGGCCCGTAGGGGGCGATTTTGACCGAAAATCCC TAACACTTTTCGTTATCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MESPLLQAFPNAVAAPTRIVIAFFLTPSDTAMQTLSALLPIFLTVFLAELGDKTQLATMLYASGGQSRPLAIFIAASAAL VLSTALAVFVGAMMTRYVEALPLKLIAGVGFIVIGSWTVFQHYRGA
Sequences:
>Translated_126_residues MESPLLQAFPNAVAAPTRIVIAFFLTPSDTAMQTLSALLPIFLTVFLAELGDKTQLATMLYASGGQSRPLAIFIAASAAL VLSTALAVFVGAMMTRYVEALPLKLIAGVGFIVIGSWTVFQHYRGA >Mature_126_residues MESPLLQAFPNAVAAPTRIVIAFFLTPSDTAMQTLSALLPIFLTVFLAELGDKTQLATMLYASGGQSRPLAIFIAASAAL VLSTALAVFVGAMMTRYVEALPLKLIAGVGFIVIGSWTVFQHYRGA
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13335; Mature: 13335
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESPLLQAFPNAVAAPTRIVIAFFLTPSDTAMQTLSALLPIFLTVFLAELGDKTQLATML CCCCHHHHCCHHHCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YASGGQSRPLAIFIAASAALVLSTALAVFVGAMMTRYVEALPLKLIAGVGFIVIGSWTVF HHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHH QHYRGA HHHCCC >Mature Secondary Structure MESPLLQAFPNAVAAPTRIVIAFFLTPSDTAMQTLSALLPIFLTVFLAELGDKTQLATML CCCCHHHHCCHHHCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YASGGQSRPLAIFIAASAALVLSTALAVFVGAMMTRYVEALPLKLIAGVGFIVIGSWTVF HHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHH QHYRGA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA