Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83594706

Identifier: 83594706

GI number: 83594706

Start: 3893354

End: 3894124

Strand: Direct

Name: 83594706

Synonym: Rru_A3377

Alternate gene names: NA

Gene position: 3893354-3894124 (Clockwise)

Preceding gene: 83594702

Following gene: 83594708

Centisome position: 89.44

GC content: 67.96

Gene sequence:

>771_bases
ATGTCCACCGATCTGGCGGAACGCGCGCCCAGCATACTCACGGACTTAGATGGCGCAACCATCGCCTATCACCGCACGCC
CGGCAAGAGCCCCGGGGTGGTTTTCATTCACGGGTTCATGTCGAATATGGACGGCGGCAAGGCGCTTTTCGTTGAAAACT
GGTGCCGCAACCATGGCCGCGCCTTCCTCCGCTTCGATCAGACCGGCCACGGGCTATCGTCGGGCGCCTTCGAAGAGGGT
TCGATCGGCCGCTGGGCCGCCGATACCATCGCCGTGCTCGATGCCCTGACCAGCGGCCCCCAGGTGCTGATCGGCTCGTC
GATGGGCGGCTGGCTGATGTTGTTGGCCGCCCTCGCCCGCCCCGACAGGGTGGCCGGGTTGATCGGCTTGGCCGCCGCCC
CCGATTTCACCGAAGACCTCATCTGGGATCAAGCCTCGCCCGAGATCCGCGAGACCCTGCTGCGCGAGGGCCGCGTGGAA
GAGGCCGGCAGCGGCGACGAGGGGCCGACGGTGTTCACCAAGCTGCTGATCGAGGATGGCCGGCGCCACCTGCTGCTGCG
CGCTCCCCTGGCCATCGAGTGCCCGGTGCGGCTGATCCACGGCCTGGGCGATCAAAGCGTGCCCTGGGAAACCGCGCTGC
GCCTGCAAAAAGCCCTGCGGGCGAGCGATGTGAGCGTCACCCTGGTCAAGGACGGCGAGCACCGGCTGTCACGCCCCCAG
GACCTGGACCGCCTTGGCCGGACCCTGGAGGCGCTGCTCGCCCAGCTTTAG

Upstream 100 bases:

>100_bases
CAATCCGCGGCGCCCTCCGAGGTCCCCGGTTGGTCGGGGCGCCCGAGGCTGTTACTTTGAGTGAGCACTGTTATTTCGGA
ACCTGTCAGGGAAAAAGGCC

Downstream 100 bases:

>100_bases
CCGTCGGCATACGTGAAATCTGATCCCCGCGCACCGCTCTAAGAGCTTGATAGTCAAGAAAATCGTCGTCGCGATCTGGT
CCAGATCGCTCGGGATTTTC

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSTDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGRAFLRFDQTGHGLSSGAFEEG
SIGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALARPDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVE
EAGSGDEGPTVFTKLLIEDGRRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQ
DLDRLGRTLEALLAQL

Sequences:

>Translated_256_residues
MSTDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGRAFLRFDQTGHGLSSGAFEEG
SIGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALARPDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVE
EAGSGDEGPTVFTKLLIEDGRRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQ
DLDRLGRTLEALLAQL
>Mature_255_residues
STDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGRAFLRFDQTGHGLSSGAFEEGS
IGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALARPDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVEE
AGSGDEGPTVFTKLLIEDGRRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQD
LDRLGRTLEALLAQL

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923001, Length=247, Percent_Identity=38.8663967611336, Blast_Score=195, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27677; Mature: 27546

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGR
CCCCHHHHCCHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCC
AFLRFDQTGHGLSSGAFEEGSIGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALAR
EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCC
PDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVEEAGSGDEGPTVFTKLLIEDG
CHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
RRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQ
CCEEEEECCCEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCH
DLDRLGRTLEALLAQL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGR
CCCHHHHCCHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCC
AFLRFDQTGHGLSSGAFEEGSIGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALAR
EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCC
PDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVEEAGSGDEGPTVFTKLLIEDG
CHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
RRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQ
CCEEEEECCCEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCH
DLDRLGRTLEALLAQL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA