| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is qor [H]
Identifier: 83594700
GI number: 83594700
Start: 3887067
End: 3888044
Strand: Reverse
Name: qor [H]
Synonym: Rru_A3371
Alternate gene names: 83594700
Gene position: 3888044-3887067 (Counterclockwise)
Preceding gene: 83594703
Following gene: 83594697
Centisome position: 89.32
GC content: 68.51
Gene sequence:
>978_bases ATGCGCGCCATGGTCTGCGATGCTTTCGGACCGCCCGACGTCTTGCGGGTGGCGGATCTGCCCGATCCGCCGCTGCCGCC CGATGGCGTGCGCATCCGGGTTCGCGCCGCCGGGATCAATTTCGCCGATGGGCTTTTCATCGCCGGACAGTATCAGATCC GTCCCCGTCCGCCGTTCATTCCCGGGTTCGAGGTCGCCGGGGATATCCTGGAGGTCGGCCCCGAGGTGCTTGACCTGCGG CCGGGACAACGGGTGATGGCCATCCTTGATCAGGGCGGCTATGCCGATCAGGTGGTGGCGCCGGCCCGCGACGTCCACGC CTTGACCGACCGCATGGACCTTTTGGCCGCCGGCGGCTTTCCCATCGCCTATGGCACCTCGCATTTCGGTCTGACCGACC GCTGCCGGCTGCGGCCGGGCGAAATCGTCCTGATCCACGGCGCGGCCGGCGGCGTTGGGCTGACGGCGGTGGAATGCGCC AAGGCTTTGGGGGCGACGGTGATCGCCACCGCCGGCGGCGCCGATCGCCTGGAGATCGCCCGCCAGCACGGCGCCGATTA CGGCATCGATCATCGGAACGAGAACATCAAGGCCCGGGTGCGCGAACTGACCGGTGGGCGCGGCGTCGATGTCGTCTATG ATCCGGTGGGCGGCGATGTCTTCGACGCCTCGCTGCGCTGCACGGCGCCCGACGGTCGCATCCTGGTGGTCGGTTTCGCC AGCGGCGCCATTCCGACGCCCCCGGCCAATCTGTTGCTGGTCAAGAACATCACGGTCATCGGCTTCAATTGGGGCGGCTA TCGCCAGATCGCCGAGCAGCGGGTTCGCGAATCGATGGAAGACGTGGTGTCGTGGTGGGATCGCGGGCTGGTCACCCCCC ATGTCGGGGCGCGCTTCGCGCTGTCCCAGGCCGCCGAGGCCCTGGCCGCCCTCCGGGAGCGCAAGATCATCGGCAAGGCC GTGCTGATCCCCGATTGA
Upstream 100 bases:
>100_bases CGAACAGCGGGTTGCGGCGCGCGCGGGTTATCCGCATCATGGAAGGACAGGGGGAGCCCCGTCCGGGCGTTTCTCGATCC TTACTTAACGGAGACCGCCG
Downstream 100 bases:
>100_bases CCGCCGGTGTTATCGGCCACCGCCCCGGGGGGATAGGCTTGTGGTAAGCGAGCCCGCCCCCGGCGCGGCGGCGCCGGGGC GGCGCAGGATCAACAGATTG
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRAMVCDAFGPPDVLRVADLPDPPLPPDGVRIRVRAAGINFADGLFIAGQYQIRPRPPFIPGFEVAGDILEVGPEVLDLR PGQRVMAILDQGGYADQVVAPARDVHALTDRMDLLAAGGFPIAYGTSHFGLTDRCRLRPGEIVLIHGAAGGVGLTAVECA KALGATVIATAGGADRLEIARQHGADYGIDHRNENIKARVRELTGGRGVDVVYDPVGGDVFDASLRCTAPDGRILVVGFA SGAIPTPPANLLLVKNITVIGFNWGGYRQIAEQRVRESMEDVVSWWDRGLVTPHVGARFALSQAAEALAALRERKIIGKA VLIPD
Sequences:
>Translated_325_residues MRAMVCDAFGPPDVLRVADLPDPPLPPDGVRIRVRAAGINFADGLFIAGQYQIRPRPPFIPGFEVAGDILEVGPEVLDLR PGQRVMAILDQGGYADQVVAPARDVHALTDRMDLLAAGGFPIAYGTSHFGLTDRCRLRPGEIVLIHGAAGGVGLTAVECA KALGATVIATAGGADRLEIARQHGADYGIDHRNENIKARVRELTGGRGVDVVYDPVGGDVFDASLRCTAPDGRILVVGFA SGAIPTPPANLLLVKNITVIGFNWGGYRQIAEQRVRESMEDVVSWWDRGLVTPHVGARFALSQAAEALAALRERKIIGKA VLIPD >Mature_325_residues MRAMVCDAFGPPDVLRVADLPDPPLPPDGVRIRVRAAGINFADGLFIAGQYQIRPRPPFIPGFEVAGDILEVGPEVLDLR PGQRVMAILDQGGYADQVVAPARDVHALTDRMDLLAAGGFPIAYGTSHFGLTDRCRLRPGEIVLIHGAAGGVGLTAVECA KALGATVIATAGGADRLEIARQHGADYGIDHRNENIKARVRELTGGRGVDVVYDPVGGDVFDASLRCTAPDGRILVVGFA SGAIPTPPANLLLVKNITVIGFNWGGYRQIAEQRVRESMEDVVSWWDRGLVTPHVGARFALSQAAEALAALRERKIIGKA VLIPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=309, Percent_Identity=30.0970873786408, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI13236495, Length=309, Percent_Identity=30.0970873786408, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI18379349, Length=313, Percent_Identity=29.7124600638978, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI24308257, Length=345, Percent_Identity=28.4057971014493, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI22538446, Length=328, Percent_Identity=28.3536585365854, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI22538444, Length=328, Percent_Identity=28.3536585365854, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI194239676, Length=211, Percent_Identity=34.5971563981043, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI41872631, Length=304, Percent_Identity=28.9473684210526, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI28557745, Length=321, Percent_Identity=29.2834890965732, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI197927207, Length=177, Percent_Identity=28.8135593220339, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI47519420, Length=363, Percent_Identity=26.7217630853994, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1790485, Length=329, Percent_Identity=32.2188449848024, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI226510941, Length=253, Percent_Identity=26.4822134387352, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17507255, Length=318, Percent_Identity=27.3584905660377, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI212642053, Length=308, Percent_Identity=27.9220779220779, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17536829, Length=320, Percent_Identity=25.625, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=327, Percent_Identity=28.1345565749235, Blast_Score=124, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6319621, Length=336, Percent_Identity=24.1071428571429, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6323961, Length=337, Percent_Identity=23.7388724035608, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324486, Length=337, Percent_Identity=24.0356083086053, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI221330659, Length=300, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI19920632, Length=300, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24581345, Length=246, Percent_Identity=26.4227642276423, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34539; Mature: 34539
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAMVCDAFGPPDVLRVADLPDPPLPPDGVRIRVRAAGINFADGLFIAGQYQIRPRPPFI CCEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCC PGFEVAGDILEVGPEVLDLRPGQRVMAILDQGGYADQVVAPARDVHALTDRMDLLAAGGF CCHHHHHHHHHCCCHHEECCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCC PIAYGTSHFGLTDRCRLRPGEIVLIHGAAGGVGLTAVECAKALGATVIATAGGADRLEIA EEEECCCCCCCCCCCEECCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHH RQHGADYGIDHRNENIKARVRELTGGRGVDVVYDPVGGDVFDASLRCTAPDGRILVVGFA HHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEECCEEEEECCCCCEEEEEEC SGAIPTPPANLLLVKNITVIGFNWGGYRQIAEQRVRESMEDVVSWWDRGLVTPHVGARFA CCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LSQAAEALAALRERKIIGKAVLIPD HHHHHHHHHHHHHHHHHCCEEECCC >Mature Secondary Structure MRAMVCDAFGPPDVLRVADLPDPPLPPDGVRIRVRAAGINFADGLFIAGQYQIRPRPPFI CCEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCC PGFEVAGDILEVGPEVLDLRPGQRVMAILDQGGYADQVVAPARDVHALTDRMDLLAAGGF CCHHHHHHHHHCCCHHEECCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCC PIAYGTSHFGLTDRCRLRPGEIVLIHGAAGGVGLTAVECAKALGATVIATAGGADRLEIA EEEECCCCCCCCCCCEECCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHH RQHGADYGIDHRNENIKARVRELTGGRGVDVVYDPVGGDVFDASLRCTAPDGRILVVGFA HHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEECCEEEEECCCCCEEEEEEC SGAIPTPPANLLLVKNITVIGFNWGGYRQIAEQRVRESMEDVVSWWDRGLVTPHVGARFA CCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LSQAAEALAALRERKIIGKAVLIPD HHHHHHHHHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]