| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594693
Identifier: 83594693
GI number: 83594693
Start: 3876970
End: 3878199
Strand: Reverse
Name: 83594693
Synonym: Rru_A3364
Alternate gene names: NA
Gene position: 3878199-3876970 (Counterclockwise)
Preceding gene: 83594697
Following gene: 83594692
Centisome position: 89.1
GC content: 63.25
Gene sequence:
>1230_bases ATGAGTGACAACGGCGAACCAAAGCCGGAAGAAGACGGCGCTCCAAGCCAGCCGATCGATGCCGAGGCGTTGCTTAAGAT GGCCCGCGAAAAGACGGTCAGCAGCCGCAACCGTCTCGCCGAGGCGATGGTCGACCTTTTTTCGGCCCGGGGCCGGGTGC TGACCGAGCGCGAGCGGACGCTGATGGTCGATATCCTCAAGCGGGTTTTGCGCGAGATCGAGCATTCGGTCCGCAAACGG ATCAGCAGCGAGCTGGCCGAACGCACCGACGCGCCCCACGCGCTGATCAGCTTCCTGGCCAATGAAGATATCGATATCTC GTTTCCCATTCTCAGCCAAAGCCGGGTTCTTCAGGATGCCGATCTGATCGAGGTCATCCGCAACCGCACCTTCGAGCATC AATTGGCCATCGCCGTGCGCTTCGAGGTCAGCCCCCAGGTTTCCGCCGCCCTGGTGCAAAGCGGCGACGCCACCGTCATC ACCGAACTTTTGCGCAACCCCGACGCCCGCATTTCGGCGGCGACCATGGATTATCTGGTCGAGCAATCGCGCCGGGTCGA CACCTTTCAGGAGCCGATCCTGCGCCGGCGCGATCTGCCGCCCGATGTGGCCAAGCGCATGTTCATGTGGGTCTCGGCCG CCTTGCGCAAATATATCGTCACCCAGTTCGATCTCGACCCCGACAGCGTCGATGATCTTCTGGAAAAAGCCGCCCATGAC GGCATCGAGACCACGCTCGATGAACGCGGCCCCCAACCCGCCGCCGTTCTGGCCGATACGCTGTTCCGCAAGGGCGATAT CAATGTCGAACTGCTGATCAGCAGTCTGCACGACGGCGAGGTCGCCCTGTTCATCGAACTTTTCGCCCGGATGAGCGGCA TGCGTCCGGCCCTGGTCCAGCGCATGTTGTTCGAGCCGGGCGGCGAAGGGCTGGCGATCGCCTGCAAGGCCCTGGATTTC GCGCGCGAGGATTTCTCGGTGCTGTTCTTGCTGTCGCGTCAGGCCCGGCCGACCGGGGTCAGCAGCCTGCGCGAGACTCA CGTCCAGGTGATGGAGATCTTCGATCGCATCGCCCTTGAGGATGCCCGGCGCGTGCTTCGTCGCTGGCAGCGCGACCAGG ATTATCTCAAGGCCCTGCTGTCGCTTGAAAGCGAGGCCAGCGCCCCCACCCTGGTCTTCGGCCGCCCGGCCTCTTCCCGT CCTTTTCGGCGGCAACCCAAGGAAAGCTAG
Upstream 100 bases:
>100_bases GAAAGCTTATACTTCCGAAAACATCGAGCCAATCAGGTCGTCAAGGCCAGCGGTTCCCTCCCGCCGTTCGGGAAGGATCG GACCCGGGGATAACACCGAA
Downstream 100 bases:
>100_bases GCGATGAGCGGCGAGCCCGTCGGTCTGGCCCTGCAACGTCTCTACGACTTGACCCGTCTGGTTTCCGACTGGATCTGGGA GACCGATTCCGCCGGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MSDNGEPKPEEDGAPSQPIDAEALLKMAREKTVSSRNRLAEAMVDLFSARGRVLTERERTLMVDILKRVLREIEHSVRKR ISSELAERTDAPHALISFLANEDIDISFPILSQSRVLQDADLIEVIRNRTFEHQLAIAVRFEVSPQVSAALVQSGDATVI TELLRNPDARISAATMDYLVEQSRRVDTFQEPILRRRDLPPDVAKRMFMWVSAALRKYIVTQFDLDPDSVDDLLEKAAHD GIETTLDERGPQPAAVLADTLFRKGDINVELLISSLHDGEVALFIELFARMSGMRPALVQRMLFEPGGEGLAIACKALDF AREDFSVLFLLSRQARPTGVSSLRETHVQVMEIFDRIALEDARRVLRRWQRDQDYLKALLSLESEASAPTLVFGRPASSR PFRRQPKES
Sequences:
>Translated_409_residues MSDNGEPKPEEDGAPSQPIDAEALLKMAREKTVSSRNRLAEAMVDLFSARGRVLTERERTLMVDILKRVLREIEHSVRKR ISSELAERTDAPHALISFLANEDIDISFPILSQSRVLQDADLIEVIRNRTFEHQLAIAVRFEVSPQVSAALVQSGDATVI TELLRNPDARISAATMDYLVEQSRRVDTFQEPILRRRDLPPDVAKRMFMWVSAALRKYIVTQFDLDPDSVDDLLEKAAHD GIETTLDERGPQPAAVLADTLFRKGDINVELLISSLHDGEVALFIELFARMSGMRPALVQRMLFEPGGEGLAIACKALDF AREDFSVLFLLSRQARPTGVSSLRETHVQVMEIFDRIALEDARRVLRRWQRDQDYLKALLSLESEASAPTLVFGRPASSR PFRRQPKES >Mature_408_residues SDNGEPKPEEDGAPSQPIDAEALLKMAREKTVSSRNRLAEAMVDLFSARGRVLTERERTLMVDILKRVLREIEHSVRKRI SSELAERTDAPHALISFLANEDIDISFPILSQSRVLQDADLIEVIRNRTFEHQLAIAVRFEVSPQVSAALVQSGDATVIT ELLRNPDARISAATMDYLVEQSRRVDTFQEPILRRRDLPPDVAKRMFMWVSAALRKYIVTQFDLDPDSVDDLLEKAAHDG IETTLDERGPQPAAVLADTLFRKGDINVELLISSLHDGEVALFIELFARMSGMRPALVQRMLFEPGGEGLAIACKALDFA REDFSVLFLLSRQARPTGVSSLRETHVQVMEIFDRIALEDARRVLRRWQRDQDYLKALLSLESEASAPTLVFGRPASSRP FRRQPKES
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46140; Mature: 46009
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNGEPKPEEDGAPSQPIDAEALLKMAREKTVSSRNRLAEAMVDLFSARGRVLTERERT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LMVDILKRVLREIEHSVRKRISSELAERTDAPHALISFLANEDIDISFPILSQSRVLQDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHH DLIEVIRNRTFEHQLAIAVRFEVSPQVSAALVQSGDATVITELLRNPDARISAATMDYLV HHHHHHHCCCHHHEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH EQSRRVDTFQEPILRRRDLPPDVAKRMFMWVSAALRKYIVTQFDLDPDSVDDLLEKAAHD HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC GIETTLDERGPQPAAVLADTLFRKGDINVELLISSLHDGEVALFIELFARMSGMRPALVQ CHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEHEECCCCCHHHHHHHHHHHHCCCCHHHHH RMLFEPGGEGLAIACKALDFAREDFSVLFLLSRQARPTGVSSLRETHVQVMEIFDRIALE HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH DARRVLRRWQRDQDYLKALLSLESEASAPTLVFGRPASSRPFRRQPKES HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SDNGEPKPEEDGAPSQPIDAEALLKMAREKTVSSRNRLAEAMVDLFSARGRVLTERERT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LMVDILKRVLREIEHSVRKRISSELAERTDAPHALISFLANEDIDISFPILSQSRVLQDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHH DLIEVIRNRTFEHQLAIAVRFEVSPQVSAALVQSGDATVITELLRNPDARISAATMDYLV HHHHHHHCCCHHHEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH EQSRRVDTFQEPILRRRDLPPDVAKRMFMWVSAALRKYIVTQFDLDPDSVDDLLEKAAHD HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC GIETTLDERGPQPAAVLADTLFRKGDINVELLISSLHDGEVALFIELFARMSGMRPALVQ CHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEHEECCCCCHHHHHHHHHHHHCCCCHHHHH RMLFEPGGEGLAIACKALDFAREDFSVLFLLSRQARPTGVSSLRETHVQVMEIFDRIALE HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH DARRVLRRWQRDQDYLKALLSLESEASAPTLVFGRPASSRPFRRQPKES HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA