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The map label for this gene is yejA [C]

Identifier: 83594496

GI number: 83594496

Start: 3657615

End: 3659462

Strand: Direct

Name: yejA [C]

Synonym: Rru_A3166

Alternate gene names: 83594496

Gene position: 3657615-3659462 (Clockwise)

Preceding gene: 83594495

Following gene: 83594497

Centisome position: 84.03

GC content: 64.29

Gene sequence:

>1848_bases
ATGCGTCCCATCGCCGCCGTTACCCTCGCCGCCCTTCTCGCCCTGCCGCTGCCTTTGGCAACGGTCCAGGCCGCCGAGAC
CGCCAGCAGCGGGCCAATGCACGCCCTGTCGCTTTATGGTGACATCAAGTATCCCGCCGATTTCACCCATTTCGACTACG
TCAACCCCGAGGCCCCCAAGGGCGGCGCCATCCGCCTGTCGGCCTTCGGCACCTTCGACACCCTCAACCCCTATACGGTC
AAAGGCACCGCCGCCTTCGGCATCGGCCTGACCCAGACCACCCTGACCGTGCCCTCGGCCGACGAGCCTTCAACGGAATA
CGGTCTGGTCGCCCAGACCATGGAATTGGCCGCCGACCGCTCGTGGCTGATCTTCACGCTGCGCCCCGAGGCGCGCTGGA
GCGACGGCCAGCCGATCACCGCCGAGGATGTGGCCTTCAGCTTCCAGATCCTCAAGGACAAGGGCCAGCCGCTTTATAAT
TCCTATTATTCCAACGTCACCGGCGTCGAGGTCCTGGATGCGAAGCGGGTGAAGTTCACTTTCTCGCCCGGCGAGAACCG
CGAGCTGCCCAGCATCGTCGGCCAGTTGCCGGTGCTGCCCAAGCATTACTGGGCCACCCGCGACTTCGCCGAAACCACCC
TTGATCAGCCGGTCAGCGCCGGCCCCTATCGCATCGCCAGCTTCGAGCCCGGCCGCCAGATCACCTATGAGCGGGTCAAG
GACTACTGGGCGGAGGCCCTGCCGGTCTCCAAGGGAATGAACAACTTCGACCGCATCCGCTACGACTATTACCGCGACGT
GACCGTGACCCTGGAAGGCTTCAAGGCCGGGGCCTTCGATTTCAATTCCGAGCATAGCGCCAAGAACTGGGCCACCGAGT
ACAAGTTCCCCGCCGTGAGCGAGGGGCACGTGATCACGGAAAAAGTGCCGGTCAAGGGACCCGACCGCGAGCAGGGCTTC
ATCTTCAATATGCGCCGGGCGCAGTTCCAAGATCCCCGGGTGCGCGAAGCCCTGGCCTATGGCTTCGATTTCGAATGGAC
CAACCAGACCCTGTTCTATGGCCAGTACACCCGCACCCGCAGTTTCTTTGAAAATTCCGAACTGGCCGCCGTCGGCCTGC
CCGGCCCCGAGGAACTGAAGATCCTCGAACCGCTGCGCGCCCAGATCCCGCCCCGCGTCTTCACCGAGGAATATCAGCCC
CCCGTCACCGATGAGGCCAAGGGCGGCCTGCGCGCCAATCTCAAAAAGGCGCTCGACCTGATGAAAGAGGCGGGGTGGAC
GGTCAATGCGGCGGGCAAGATGGTCAATGCCGCCGGTCAGCCCTTCACCTTCGAAATCCTGCTGCGCCAAGCCGATGTCG
AACGCATGGTGCTGCCGATGGTCAAGAACTTCGAGCGCCTGGGCATCACCGCCACCGTGCGCACCGTCGATACGCCGCAA
TTCATCAGCCGGGTGCAAAGCTTCGATTTCGACATGGTGTCGGCGGTCTGGGCGCAGTCGAACAGCCCCGGCAATGAACA
GCGCGATCTGTGGTCCTCGACCGCCGCCGACATCCCCGGCACCAGCAATCTGGCCGGCCTGAAGAGCCCCGCCGTCGATA
GCCTGATCGAATCGGTGATCGCCGCGCCGACCCGCGCCGATCTGATCGCCCGCACCCGGGCGCTTGACCGCGTGCTGCAA
TGGTCCTTCCCGTGGATCCCCCATTACTACGGCGCCTTTGAGCGCATCGCCTATTGGAACGTCTTCGGCCGCCCGGCGGT
CACGCCCAATCGCGGCGTCGTCTTCCAGGCCTGGTGGTTCGACGCCGAGAAGGCCGCAAAGGTCGTCGGCCGCAAGGGCG
GCTTCTAA

Upstream 100 bases:

>100_bases
AACGGCGCTCTAAACCCGCTCCCCTGGCGGTTCCGCCCTATTTCGCCCACATTGGAAGGGCCCTTTGCCGGGGCTAGCTC
CGTTCGACCGGGAGACCGTG

Downstream 100 bases:

>100_bases
GACGCGGCCGGCGGAGCGCAGGGGGACGCCATGATCGCCTATATCCTGCGCCGTCTGGCGCTAATCCCTTTGACCCTGTT
CGGGATCATCCTGGTCAATT

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MRPIAAVTLAALLALPLPLATVQAAETASSGPMHALSLYGDIKYPADFTHFDYVNPEAPKGGAIRLSAFGTFDTLNPYTV
KGTAAFGIGLTQTTLTVPSADEPSTEYGLVAQTMELAADRSWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYN
SYYSNVTGVEVLDAKRVKFTFSPGENRELPSIVGQLPVLPKHYWATRDFAETTLDQPVSAGPYRIASFEPGRQITYERVK
DYWAEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAVSEGHVITEKVPVKGPDREQGF
IFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRTRSFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQP
PVTDEAKGGLRANLKKALDLMKEAGWTVNAAGKMVNAAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTPQ
FISRVQSFDFDMVSAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESVIAAPTRADLIARTRALDRVLQ
WSFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWWFDAEKAAKVVGRKGGF

Sequences:

>Translated_615_residues
MRPIAAVTLAALLALPLPLATVQAAETASSGPMHALSLYGDIKYPADFTHFDYVNPEAPKGGAIRLSAFGTFDTLNPYTV
KGTAAFGIGLTQTTLTVPSADEPSTEYGLVAQTMELAADRSWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYN
SYYSNVTGVEVLDAKRVKFTFSPGENRELPSIVGQLPVLPKHYWATRDFAETTLDQPVSAGPYRIASFEPGRQITYERVK
DYWAEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAVSEGHVITEKVPVKGPDREQGF
IFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRTRSFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQP
PVTDEAKGGLRANLKKALDLMKEAGWTVNAAGKMVNAAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTPQ
FISRVQSFDFDMVSAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESVIAAPTRADLIARTRALDRVLQ
WSFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWWFDAEKAAKVVGRKGGF
>Mature_615_residues
MRPIAAVTLAALLALPLPLATVQAAETASSGPMHALSLYGDIKYPADFTHFDYVNPEAPKGGAIRLSAFGTFDTLNPYTV
KGTAAFGIGLTQTTLTVPSADEPSTEYGLVAQTMELAADRSWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYN
SYYSNVTGVEVLDAKRVKFTFSPGENRELPSIVGQLPVLPKHYWATRDFAETTLDQPVSAGPYRIASFEPGRQITYERVK
DYWAEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAVSEGHVITEKVPVKGPDREQGF
IFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRTRSFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQP
PVTDEAKGGLRANLKKALDLMKEAGWTVNAAGKMVNAAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTPQ
FISRVQSFDFDMVSAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESVIAAPTRADLIARTRALDRVLQ
WSFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWWFDAEKAAKVVGRKGGF

Specific function: Possible binding-protein with either a transport or enzymatic activity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=598, Percent_Identity=40.6354515050167, Blast_Score=450, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68570; Mature: 68570

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPIAAVTLAALLALPLPLATVQAAETASSGPMHALSLYGDIKYPADFTHFDYVNPEAPK
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
GGAIRLSAFGTFDTLNPYTVKGTAAFGIGLTQTTLTVPSADEPSTEYGLVAQTMELAADR
CCEEEEEECCCCCCCCCEEEECCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
SWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYNSYYSNVTGVEVLDAKRVKFT
CEEEEEECCCCCCCCCCCCCHHHHHEEEEEECCCCCHHHHHHHCCCCCEEEEECCEEEEE
FSPGENRELPSIVGQLPVLPKHYWATRDFAETTLDQPVSAGPYRIASFEPGRQITYERVK
ECCCCCCCHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHH
DYWAEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAVS
HHHHHHCCHHHCCCHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCC
EGHVITEKVPVKGPDREQGFIFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRTR
CCCEEEEECCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHCCCEEECCCEEEEECHHHHH
SFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQPPVTDEAKGGLRANLKKALDL
HHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
MKEAGWTVNAAGKMVNAAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTPQ
HHHCCCEEECCCHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCHH
FISRVQSFDFDMVSAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESVI
HHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AAPTRADLIARTRALDRVLQWSFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWWF
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEEC
DAEKAAKVVGRKGGF
CHHHHHHHHHCCCCC
>Mature Secondary Structure
MRPIAAVTLAALLALPLPLATVQAAETASSGPMHALSLYGDIKYPADFTHFDYVNPEAPK
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
GGAIRLSAFGTFDTLNPYTVKGTAAFGIGLTQTTLTVPSADEPSTEYGLVAQTMELAADR
CCEEEEEECCCCCCCCCEEEECCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
SWLIFTLRPEARWSDGQPITAEDVAFSFQILKDKGQPLYNSYYSNVTGVEVLDAKRVKFT
CEEEEEECCCCCCCCCCCCCHHHHHEEEEEECCCCCHHHHHHHCCCCCEEEEECCEEEEE
FSPGENRELPSIVGQLPVLPKHYWATRDFAETTLDQPVSAGPYRIASFEPGRQITYERVK
ECCCCCCCHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHH
DYWAEALPVSKGMNNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAVS
HHHHHHCCHHHCCCHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCC
EGHVITEKVPVKGPDREQGFIFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRTR
CCCEEEEECCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHCCCEEECCCEEEEECHHHHH
SFFENSELAAVGLPGPEELKILEPLRAQIPPRVFTEEYQPPVTDEAKGGLRANLKKALDL
HHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
MKEAGWTVNAAGKMVNAAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTPQ
HHHCCCEEECCCHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCHH
FISRVQSFDFDMVSAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESVI
HHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AAPTRADLIARTRALDRVLQWSFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWWF
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEEC
DAEKAAKVVGRKGGF
CHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]