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The map label for this gene is yejB [H]

Identifier: 83594497

GI number: 83594497

Start: 3659493

End: 3660596

Strand: Direct

Name: yejB [H]

Synonym: Rru_A3167

Alternate gene names: 83594497

Gene position: 3659493-3660596 (Clockwise)

Preceding gene: 83594496

Following gene: 83594498

Centisome position: 84.07

GC content: 61.5

Gene sequence:

>1104_bases
ATGATCGCCTATATCCTGCGCCGTCTGGCGCTAATCCCTTTGACCCTGTTCGGGATCATCCTGGTCAATTTCCTGATCGT
CCAGATCGCTCCGGGCGGTCCGGTCGAGCAGGTGCTCTCACGCCTTCAGGGCATGGACGGCGGGGCCACGGCGCGCTTCA
GCGGCAGTGGCGGCGGCGAAGCGGGCGGTGGATCCGCGACGAGCGCCCTCGGCCCGACCACCGCCTATCGCGGCGCCCGC
GGCCTGGATCCGGCCTATGTGAAAAGCCTCGAGGTCCAGTTCGGCTTCGACCGCCCGGCCCACGAGCGCTTCTTGAAGAT
GGTCGGCGATTATCTGACCTTCGATCTTGGCCAATCCTATTACCGCTCGATCCCGGTCATCGATCTGATCTTGGAAAAAA
TGCCGGTGTCCCTGTCGCTGGGCATCTGGAGCACGATGATCATCTATCTGGTGTCGATCCCGCTGGGCATCGCCAAGGCG
GTGCGCGACGGCTCGCGTTTCGACATGGCGACAAGCTGGATGGTGGTGGTCGGCTACGCCGTGCCGTCGTTCCTCTTCGC
CATCTTACTGATCATCGTCTTCGCCGGCGGCCGCTATTTCGACTGGTTCCCGCTGCGCGGCATCCTGTCGGACAACTGGC
GCGAGCTGTCCTGGCCGCAACTGGCCCTGGATTACCTCTGGCATATGGTGCTGCCGGTCACCGCCCTGGTCATCGGCGGC
TTCGCCAGCCTGACCATGCTGACCAAGAACAGTTTCCTCGAGGAAATCCGCAAGCAATACGTCATCACCGCCCGGGCCAA
GGGGCTGACCGAAAGCAAGATCCTCTACCGCCATGTTTTTCGCAACGCCATGCTGCTGGTGGTGGCCGGCTTCCCCGCCG
CCCTGGTGTCGATGCTGTTCACCGGTTCGGTGCTGATCGAGGTGATCTTCTCGCTTGATGGCCTGGGCCTACTGGGCTTT
GAAAGCACGATGAACCGGGATTATCCGGTGATGTTCGGCACGCTCTATATCTTCGGGCTGATCGGACTTTTGCTGTCGCT
GATCAGCGATGCCACCTATCACATCATCGATCCGCGCATCGATTTCGAAAGCCGGGAGAACTAG

Upstream 100 bases:

>100_bases
CGTCTTCCAGGCCTGGTGGTTCGACGCCGAGAAGGCCGCAAAGGTCGTCGGCCGCAAGGGCGGCTTCTAAGACGCGGCCG
GCGGAGCGCAGGGGGACGCC

Downstream 100 bases:

>100_bases
GGCCCCATGGTCGCTCTGCTCACCCTCACGCCGCTGACCCGCCGCCGGCTCGCCGCCTTTCGCCGCAACCGCCGGGGCTT
CCATTCCCTGTGGATCTTCC

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MIAYILRRLALIPLTLFGIILVNFLIVQIAPGGPVEQVLSRLQGMDGGATARFSGSGGGEAGGGSATSALGPTTAYRGAR
GLDPAYVKSLEVQFGFDRPAHERFLKMVGDYLTFDLGQSYYRSIPVIDLILEKMPVSLSLGIWSTMIIYLVSIPLGIAKA
VRDGSRFDMATSWMVVVGYAVPSFLFAILLIIVFAGGRYFDWFPLRGILSDNWRELSWPQLALDYLWHMVLPVTALVIGG
FASLTMLTKNSFLEEIRKQYVITARAKGLTESKILYRHVFRNAMLLVVAGFPAALVSMLFTGSVLIEVIFSLDGLGLLGF
ESTMNRDYPVMFGTLYIFGLIGLLLSLISDATYHIIDPRIDFESREN

Sequences:

>Translated_367_residues
MIAYILRRLALIPLTLFGIILVNFLIVQIAPGGPVEQVLSRLQGMDGGATARFSGSGGGEAGGGSATSALGPTTAYRGAR
GLDPAYVKSLEVQFGFDRPAHERFLKMVGDYLTFDLGQSYYRSIPVIDLILEKMPVSLSLGIWSTMIIYLVSIPLGIAKA
VRDGSRFDMATSWMVVVGYAVPSFLFAILLIIVFAGGRYFDWFPLRGILSDNWRELSWPQLALDYLWHMVLPVTALVIGG
FASLTMLTKNSFLEEIRKQYVITARAKGLTESKILYRHVFRNAMLLVVAGFPAALVSMLFTGSVLIEVIFSLDGLGLLGF
ESTMNRDYPVMFGTLYIFGLIGLLLSLISDATYHIIDPRIDFESREN
>Mature_367_residues
MIAYILRRLALIPLTLFGIILVNFLIVQIAPGGPVEQVLSRLQGMDGGATARFSGSGGGEAGGGSATSALGPTTAYRGAR
GLDPAYVKSLEVQFGFDRPAHERFLKMVGDYLTFDLGQSYYRSIPVIDLILEKMPVSLSLGIWSTMIIYLVSIPLGIAKA
VRDGSRFDMATSWMVVVGYAVPSFLFAILLIIVFAGGRYFDWFPLRGILSDNWRELSWPQLALDYLWHMVLPVTALVIGG
FASLTMLTKNSFLEEIRKQYVITARAKGLTESKILYRHVFRNAMLLVVAGFPAALVSMLFTGSVLIEVIFSLDGLGLLGF
ESTMNRDYPVMFGTLYIFGLIGLLLSLISDATYHIIDPRIDFESREN

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=367, Percent_Identity=60.2179836512262, Blast_Score=452, Evalue=1e-128,
Organism=Escherichia coli, GI1789965, Length=380, Percent_Identity=28.9473684210526, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI1787497, Length=364, Percent_Identity=27.7472527472527, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1787053, Length=364, Percent_Identity=28.021978021978, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1789888, Length=361, Percent_Identity=26.5927977839335, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787761, Length=307, Percent_Identity=27.6872964169381, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787550, Length=265, Percent_Identity=24.9056603773585, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40423; Mature: 40423

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]