| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594456
Identifier: 83594456
GI number: 83594456
Start: 3605249
End: 3606325
Strand: Direct
Name: 83594456
Synonym: Rru_A3126
Alternate gene names: NA
Gene position: 3605249-3606325 (Clockwise)
Preceding gene: 83594454
Following gene: 83594458
Centisome position: 82.83
GC content: 69.27
Gene sequence:
>1077_bases ATGAGCCTGATCAAGCTTTCGTCCTTCGCCGCCTTCAACGAGCGCTTCGGCGCCGCATTGAACGTCGGCACGATCGGCGG CTTTTTTCATTCCCCCGAATGGTTCGCCTGCCTGTTCGCCCATGGCCTGGAACCCGCCGACGCCGGGGCGACCCCGGCGA TCTTCGTCCTCGATCAGGAGGGTCCCCGGGCCGCGCTATTTTGCCTGCGCCGCCAGAACGGCATCTTGCGCAGCCTGACC AGCTATTACACCACCGACTACACCGCCAGTTGCCCGGCCGGCGGCGGCGAGCGGGCGGCGATCATCGAAGATCTTGGCCG TCATCTGTCCCAAAAGCTGGGGCGACGGGGCGCGCCATCGCTGGAACTGCGCTATCTGCGGGCGGACTCGCCCGATCTGG CGGCTTTGGAGCGCGGGTTGCGCCGACCGCCGCTGGTCCACGGCCGCTTCGCCCAATGGCAAAACTGGTATGCGCCGGTC GAGGCTGGGGCCTATGGCGCTTACGCCGCCGCCCGTCCCTCGCGCCTGCGCCACACCCTGGCCCGCAAAAAGGCGAGGCT GGAGCGCCAGGGCACGATGACCCTGCGCCTCCACCGCACCGCCGATGCCGGGGCTTTGGCCGCCTATGAGACCGTCTATG GCGCAAGCTGGAAGCCGGCCGAAGCGTCACCGGACTTTATACGCGCCCTGGCCGTCACGGCGGCCAAGGCCGGGGCCCTG CGCCTGGGGGTTCTCCACATCGACGGCGCCCCGGCGGCGGCCCAGATCTGGCTGGTCTCGGCCGGGCGGGCGACCATCTA CAAGCTGGCCCACCATCCGCGTTTCGATGACCTGTCGGTCGGCTCGCTGCTCACGCAAGCCCTGGCCGAGGAGGTGATCA ACCGCGACGGCGTGAGCGAGATCGACTTCGGCCTGGGCGACGAGCCCTATAAGCGCGACTGGATGACCGCGGAGCGCCCG GTGGTCGGGCTGGAGATCCAGTCTCCGACCACGGCGCGCGGCCTGATCGGCTGCGCCCGCCTCGGCCTGGGCCGCCTGCG CCGATCCCTTCGCCCGGTCAATACAACTCGGTCCTGA
Upstream 100 bases:
>100_bases AGCGCGCGGCGGGCGCCACGTCTGTGACCGGCGGAGTGTCGGCGAGGCCTCCGCCTCGCACAAGGCAAAAGACGCCGCCC CCCGCCCGGCGGAGCGGGCG
Downstream 100 bases:
>100_bases CCGCTTGCGCATAGGCCGCGTCGACCTGGGCAACCTGGGCCTCGCCAAGCAGCCTGAACGAGGCCATCACCGCGCCAACC GTCGGCACGACCCCGGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSLIKLSSFAAFNERFGAALNVGTIGGFFHSPEWFACLFAHGLEPADAGATPAIFVLDQEGPRAALFCLRRQNGILRSLT SYYTTDYTASCPAGGGERAAIIEDLGRHLSQKLGRRGAPSLELRYLRADSPDLAALERGLRRPPLVHGRFAQWQNWYAPV EAGAYGAYAAARPSRLRHTLARKKARLERQGTMTLRLHRTADAGALAAYETVYGASWKPAEASPDFIRALAVTAAKAGAL RLGVLHIDGAPAAAQIWLVSAGRATIYKLAHHPRFDDLSVGSLLTQALAEEVINRDGVSEIDFGLGDEPYKRDWMTAERP VVGLEIQSPTTARGLIGCARLGLGRLRRSLRPVNTTRS
Sequences:
>Translated_358_residues MSLIKLSSFAAFNERFGAALNVGTIGGFFHSPEWFACLFAHGLEPADAGATPAIFVLDQEGPRAALFCLRRQNGILRSLT SYYTTDYTASCPAGGGERAAIIEDLGRHLSQKLGRRGAPSLELRYLRADSPDLAALERGLRRPPLVHGRFAQWQNWYAPV EAGAYGAYAAARPSRLRHTLARKKARLERQGTMTLRLHRTADAGALAAYETVYGASWKPAEASPDFIRALAVTAAKAGAL RLGVLHIDGAPAAAQIWLVSAGRATIYKLAHHPRFDDLSVGSLLTQALAEEVINRDGVSEIDFGLGDEPYKRDWMTAERP VVGLEIQSPTTARGLIGCARLGLGRLRRSLRPVNTTRS >Mature_357_residues SLIKLSSFAAFNERFGAALNVGTIGGFFHSPEWFACLFAHGLEPADAGATPAIFVLDQEGPRAALFCLRRQNGILRSLTS YYTTDYTASCPAGGGERAAIIEDLGRHLSQKLGRRGAPSLELRYLRADSPDLAALERGLRRPPLVHGRFAQWQNWYAPVE AGAYGAYAAARPSRLRHTLARKKARLERQGTMTLRLHRTADAGALAAYETVYGASWKPAEASPDFIRALAVTAAKAGALR LGVLHIDGAPAAAQIWLVSAGRATIYKLAHHPRFDDLSVGSLLTQALAEEVINRDGVSEIDFGLGDEPYKRDWMTAERPV VGLEIQSPTTARGLIGCARLGLGRLRRSLRPVNTTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38843; Mature: 38712
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIKLSSFAAFNERFGAALNVGTIGGFFHSPEWFACLFAHGLEPADAGATPAIFVLDQE CCEEECHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECC GPRAALFCLRRQNGILRSLTSYYTTDYTASCPAGGGERAAIIEDLGRHLSQKLGRRGAPS CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC LELRYLRADSPDLAALERGLRRPPLVHGRFAQWQNWYAPVEAGAYGAYAAARPSRLRHTL EEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHH ARKKARLERQGTMTLRLHRTADAGALAAYETVYGASWKPAEASPDFIRALAVTAAKAGAL HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEE RLGVLHIDGAPAAAQIWLVSAGRATIYKLAHHPRFDDLSVGSLLTQALAEEVINRDGVSE EEEEEEECCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC IDFGLGDEPYKRDWMTAERPVVGLEIQSPTTARGLIGCARLGLGRLRRSLRPVNTTRS CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLIKLSSFAAFNERFGAALNVGTIGGFFHSPEWFACLFAHGLEPADAGATPAIFVLDQE CEEECHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECC GPRAALFCLRRQNGILRSLTSYYTTDYTASCPAGGGERAAIIEDLGRHLSQKLGRRGAPS CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC LELRYLRADSPDLAALERGLRRPPLVHGRFAQWQNWYAPVEAGAYGAYAAARPSRLRHTL EEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHH ARKKARLERQGTMTLRLHRTADAGALAAYETVYGASWKPAEASPDFIRALAVTAAKAGAL HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEE RLGVLHIDGAPAAAQIWLVSAGRATIYKLAHHPRFDDLSVGSLLTQALAEEVINRDGVSE EEEEEEECCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC IDFGLGDEPYKRDWMTAERPVVGLEIQSPTTARGLIGCARLGLGRLRRSLRPVNTTRS CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA