| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594454
Identifier: 83594454
GI number: 83594454
Start: 3603157
End: 3603999
Strand: Direct
Name: 83594454
Synonym: Rru_A3124
Alternate gene names: NA
Gene position: 3603157-3603999 (Clockwise)
Preceding gene: 83594453
Following gene: 83594456
Centisome position: 82.78
GC content: 70.46
Gene sequence:
>843_bases GTGACCGTCGATCGCTTTCCCGCCCCCGCCGAAGAAGCGCTGTCCCTGACCTGCGAGGGTTCGTCGCTGATCGGCGTTTT CCATCCCACGGCCAAGCCTCACCCCACCGTCGGGCTGATCATCGTCGTCGGCGGTCCCCAGTACCGGGTGGGCGCCCATC GCCAGAATGTCCGCCTTGCCCGCCATGTCGCCGAGGCCGGCTTTCCGGTGCTGCGCTTCGATCTGCGCGGCATGGGCGAT AGCGAGGGAACGGCGCCGGGGTTCGAGGCCAGCCGCGCCGATATCACCGCCGCCCTGGCCGGCCTGCGGGCGTGGGTGCC ATCGTTGCGCCAGATCGTCGCCTGGGGGTTATGCGATGGCGCCAGCGCCGTTCTGCTCGATCTCGACCATGTGCCGCTCG CTGGCGCCATCCTGGTCAACCCCTGGGCCCAAGAGGCCGAGCAGGCGCCCTTGCGCGACCGGCTTTATTACCGTGGCCAA CTGCGCTCCAAGGCGTTCTGGGGCAAGCTGCTGCGCGGCGACCTGCCCTGGCGCTCGGCCCTGCGCGGGCTGGGCGGCTT GCTCAAGCGCGCCCCGCGCGGGGATGAGACCGCGCAAGGCGGTCTGGCCTGCCGCCTGCGCGCCGCCCTTGCCCGGCACA AGGTGCCGCTGCTCGTCATTCTAGCCGATCAGGACGTGACGGCCGGGCTGTTCGCCGCCTCGGTGCTCGGCTCACGGCGC TGGCCGGGGATCACCGTCACCTCTCTCCCCGGGGCCGATCACACCTTTTCCGACCCGCGCCATGAACAGCGGTTGCGCGA GATCACCACCCAGTGGCTCAAAGCCCTGCCGCCAGAGCCCTAA
Upstream 100 bases:
>100_bases TGACCGTCGATCGCTTTCCCGCCCCCGCCTTCTGGATGCTTGAAGGCAAACAGGCCGCCCCCGAACTGATCGCGCGCACC ACCGCCCTGTGGTCCGTATC
Downstream 100 bases:
>100_bases TCGGGCGCTTGCCCGCGAAACACCCGGCGATAGGCCTCGATCATCTTGTCCTCGCCAAACAGCGCGAAAGCGCGGGCGCG GTTCTCGGCGCCGATGGCTT
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Esterase/Lipase/Thioesterase
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTVDRFPAPAEEALSLTCEGSSLIGVFHPTAKPHPTVGLIIVVGGPQYRVGAHRQNVRLARHVAEAGFPVLRFDLRGMGD SEGTAPGFEASRADITAALAGLRAWVPSLRQIVAWGLCDGASAVLLDLDHVPLAGAILVNPWAQEAEQAPLRDRLYYRGQ LRSKAFWGKLLRGDLPWRSALRGLGGLLKRAPRGDETAQGGLACRLRAALARHKVPLLVILADQDVTAGLFAASVLGSRR WPGITVTSLPGADHTFSDPRHEQRLREITTQWLKALPPEP
Sequences:
>Translated_280_residues MTVDRFPAPAEEALSLTCEGSSLIGVFHPTAKPHPTVGLIIVVGGPQYRVGAHRQNVRLARHVAEAGFPVLRFDLRGMGD SEGTAPGFEASRADITAALAGLRAWVPSLRQIVAWGLCDGASAVLLDLDHVPLAGAILVNPWAQEAEQAPLRDRLYYRGQ LRSKAFWGKLLRGDLPWRSALRGLGGLLKRAPRGDETAQGGLACRLRAALARHKVPLLVILADQDVTAGLFAASVLGSRR WPGITVTSLPGADHTFSDPRHEQRLREITTQWLKALPPEP >Mature_279_residues TVDRFPAPAEEALSLTCEGSSLIGVFHPTAKPHPTVGLIIVVGGPQYRVGAHRQNVRLARHVAEAGFPVLRFDLRGMGDS EGTAPGFEASRADITAALAGLRAWVPSLRQIVAWGLCDGASAVLLDLDHVPLAGAILVNPWAQEAEQAPLRDRLYYRGQL RSKAFWGKLLRGDLPWRSALRGLGGLLKRAPRGDETAQGGLACRLRAALARHKVPLLVILADQDVTAGLFAASVLGSRRW PGITVTSLPGADHTFSDPRHEQRLREITTQWLKALPPEP
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30229; Mature: 30098
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDRFPAPAEEALSLTCEGSSLIGVFHPTAKPHPTVGLIIVVGGPQYRVGAHRQNVRLA CCCCCCCCCHHHHEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCEEECCCHHHHHHH RHVAEAGFPVLRFDLRGMGDSEGTAPGFEASRADITAALAGLRAWVPSLRQIVAWGLCDG HHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ASAVLLDLDHVPLAGAILVNPWAQEAEQAPLRDRLYYRGQLRSKAFWGKLLRGDLPWRSA CCEEEEECCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LRGLGGLLKRAPRGDETAQGGLACRLRAALARHKVPLLVILADQDVTAGLFAASVLGSRR HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCC WPGITVTSLPGADHTFSDPRHEQRLREITTQWLKALPPEP CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVDRFPAPAEEALSLTCEGSSLIGVFHPTAKPHPTVGLIIVVGGPQYRVGAHRQNVRLA CCCCCCCCHHHHEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCEEECCCHHHHHHH RHVAEAGFPVLRFDLRGMGDSEGTAPGFEASRADITAALAGLRAWVPSLRQIVAWGLCDG HHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ASAVLLDLDHVPLAGAILVNPWAQEAEQAPLRDRLYYRGQLRSKAFWGKLLRGDLPWRSA CCEEEEECCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LRGLGGLLKRAPRGDETAQGGLACRLRAALARHKVPLLVILADQDVTAGLFAASVLGSRR HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCC WPGITVTSLPGADHTFSDPRHEQRLREITTQWLKALPPEP CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA