| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is dctB [H]
Identifier: 83594433
GI number: 83594433
Start: 3572008
End: 3574074
Strand: Direct
Name: dctB [H]
Synonym: Rru_A3103
Alternate gene names: 83594433
Gene position: 3572008-3574074 (Clockwise)
Preceding gene: 83594432
Following gene: 83594434
Centisome position: 82.06
GC content: 66.28
Gene sequence:
>2067_bases ATGGTGATGGTCGTCGGATATTGCCTGGCCTGCGCCGCGTTCCTGGTGCTGATCGTCCAGGCGGTCAGCGGGCGCAGGCG GACCGGTCGCGAAAGGCTGGTTCTGGCCATGCCTTTGGTCGCCGGCGCCCTGTGGGCGGGGGTGACCGCGGCCCGCGCCG TGGTTCCCCTGCCCGATTGGGCCTTCGTCCTGGCCGAGATCGGCCGCGCCGCCTGCTGGATCGGCCTGCTGGCGGCCATC GTTCTTGAAAACCGCGAGCGGCGGCTGTTGGCGGTCTCGTTGCTGACCATCGTCCTCGGCGGCGGCGCCGTCATCCTCCA CGCCGCCCTGCACGATCGCGACGCCTTCTGGTCGCTGACCTTATCAAGCCTGTTGCTCTACACCATCGCCGGCTTCGTCC TGCTCGAGCAACTCTACCGCTCGGCCCGCGAGCAGCAGAAATGGATGATCAAGCATCTTTCGATCGCCCTGGTCTGCTTT TTCGGCTTCGATCTTTACTTCTTCTCGACCGCCCTGGTCATGGGGGGCCTCGATATCGATCTGTTGACGGCGCGCGGCTA CGTCGCGGCTTTTCTGGCGCTGATGGCGACGGTTTCGATCAGCCGGCTGAACGGCCATTCCGAACGCCTGCACCTGTCCC ATGGCGCCGCCTTCCAATCGATGATCCTGGTCGCCTGTGGCCTCTATCTGGTCAGCATGGCCGCCATCGGCTACTACCTG CGCCATATCGGCGGCGCCTGGGGCGGGCCGCTTGAGATCGTCTTTTTCTTCGCCACTCTGGCGCTTCTCGGCATCGGCCT GTCCTCGGGCGCGCTGCGCGCCCGCCTGCGGGTGATCGTCAGCAAGCATTTCTTCAAATACCGCTATGACTACCGCAACG AATGGCTGGGCTTCACCGCCACCATCACCGGGGCGGGCAGCGAAGGATTGCACGAGCGCATCGTCAAGGCGGTCGCCGCC ATCATCGAAAGCACCGGCGGCGCCTTGTGGACCCGCAGCGTCGAAGATGGCGTTTTGCTGCCGACCGCCCGCTGGAACAT GGGGGCCTCGCCGCTGCCGGCCATTCCCCTCGACTCCTCGCTCTGCCGCTATCTGCAAAGCCAGGCCTGGGTGGTCGACC TTTCCGAGGCCCTGACCTTCCCCGACCGCTACCCCGGCCTGACGCTGCCCGACTGGCTGGCCGAGCATCCCCGCGCCGGG CTTTGCGTGCCGCTGATCCTGCGCGAGGAACTGCAAGGCGTGCTGGTGCTCGGCCCCTTGCGGGCGCCGCGCAAGCTGGT GTGGGAAGACCTCGACATATTGAAAACCGTCGGCTGCCACGCGGCGGGCTATCTGTCGGAAGAACGCGCCCTCAACCGGC TGTCCGACGCCCAGCGCCTGGACGCCTTCAACCGCCGCTTCGCCTTCGTCATTCACGACATCAAAAACGTCGTCAGCCAG ATGTGCCTGATGGCCAAAAACGCCGAGCGCTTTGGCGACAACCCGGATTTCCAGAAGGACATGATCGCCACCGTGGTTCA TTCCGCCGATCGCCTTCAGAAACTTCTTCAAGATCTCAAGGCCGCCGGCCAGACCCCCGACCCGGCGGCCCTGTCCCCCG CCGCCGTCCCGCTGGCCGAGGTGGTGCGCGAGGCCGGGGAGCGCTGGCGGGCCCTGAAACCCGACCTGCTGGTCGACTTG GCCCCGGATTGGGCCCCGAACTCGGCCATCGTCTGCTCGGGGCGCGAGATGGCATCGGTTCTCGATCACCTTTTGCAAAA CGCCATCGACGCCGTCGCCACCACCGGAGGGACGGTGCGCCTGTCCCATCGCGAAGGCGGCGGTCAGGCAATCGTCGAAG TCGCCGACGAGGGGCCGGGAATGGAGGACGCCTTTATCGCCGACGGCCTGTTCCGACCGCTGAATTCGACCAAATCAACG GGTTTGGGAATCGGCGCCTTCCAGTGCCGCGAGATCGTACGCCGCATGGGCGGACAGTTGACCGTCACCTCCGACCGGGG ACGGGGCACCCGCATGACCGTGTTGCTGCCCGATAGGACCGCCCAGGCCCGCCGAGGTGCGGCATGA
Upstream 100 bases:
>100_bases CGACATCATCATCTTGTTCCAAACCTTCCGCGTCGTTCTATGGCCGGAGGGATCGAAGGAGAAAGCCGGGGCGGTCGTCC GCTAAGGAAAGGGGCGCTTG
Downstream 100 bases:
>100_bases CCGAACCGCTCCCCCGCCTGCTGATCGTCGAGGATGATCTGGGTGTGCAGTCCCAGCTCAAGTGGAGCTTCTCCGACGAG TGGCTGATCGATGTCGCCGC
Product: multi-sensor Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MVMVVGYCLACAAFLVLIVQAVSGRRRTGRERLVLAMPLVAGALWAGVTAARAVVPLPDWAFVLAEIGRAACWIGLLAAI VLENRERRLLAVSLLTIVLGGGAVILHAALHDRDAFWSLTLSSLLLYTIAGFVLLEQLYRSAREQQKWMIKHLSIALVCF FGFDLYFFSTALVMGGLDIDLLTARGYVAAFLALMATVSISRLNGHSERLHLSHGAAFQSMILVACGLYLVSMAAIGYYL RHIGGAWGGPLEIVFFFATLALLGIGLSSGALRARLRVIVSKHFFKYRYDYRNEWLGFTATITGAGSEGLHERIVKAVAA IIESTGGALWTRSVEDGVLLPTARWNMGASPLPAIPLDSSLCRYLQSQAWVVDLSEALTFPDRYPGLTLPDWLAEHPRAG LCVPLILREELQGVLVLGPLRAPRKLVWEDLDILKTVGCHAAGYLSEERALNRLSDAQRLDAFNRRFAFVIHDIKNVVSQ MCLMAKNAERFGDNPDFQKDMIATVVHSADRLQKLLQDLKAAGQTPDPAALSPAAVPLAEVVREAGERWRALKPDLLVDL APDWAPNSAIVCSGREMASVLDHLLQNAIDAVATTGGTVRLSHREGGGQAIVEVADEGPGMEDAFIADGLFRPLNSTKST GLGIGAFQCREIVRRMGGQLTVTSDRGRGTRMTVLLPDRTAQARRGAA
Sequences:
>Translated_688_residues MVMVVGYCLACAAFLVLIVQAVSGRRRTGRERLVLAMPLVAGALWAGVTAARAVVPLPDWAFVLAEIGRAACWIGLLAAI VLENRERRLLAVSLLTIVLGGGAVILHAALHDRDAFWSLTLSSLLLYTIAGFVLLEQLYRSAREQQKWMIKHLSIALVCF FGFDLYFFSTALVMGGLDIDLLTARGYVAAFLALMATVSISRLNGHSERLHLSHGAAFQSMILVACGLYLVSMAAIGYYL RHIGGAWGGPLEIVFFFATLALLGIGLSSGALRARLRVIVSKHFFKYRYDYRNEWLGFTATITGAGSEGLHERIVKAVAA IIESTGGALWTRSVEDGVLLPTARWNMGASPLPAIPLDSSLCRYLQSQAWVVDLSEALTFPDRYPGLTLPDWLAEHPRAG LCVPLILREELQGVLVLGPLRAPRKLVWEDLDILKTVGCHAAGYLSEERALNRLSDAQRLDAFNRRFAFVIHDIKNVVSQ MCLMAKNAERFGDNPDFQKDMIATVVHSADRLQKLLQDLKAAGQTPDPAALSPAAVPLAEVVREAGERWRALKPDLLVDL APDWAPNSAIVCSGREMASVLDHLLQNAIDAVATTGGTVRLSHREGGGQAIVEVADEGPGMEDAFIADGLFRPLNSTKST GLGIGAFQCREIVRRMGGQLTVTSDRGRGTRMTVLLPDRTAQARRGAA >Mature_688_residues MVMVVGYCLACAAFLVLIVQAVSGRRRTGRERLVLAMPLVAGALWAGVTAARAVVPLPDWAFVLAEIGRAACWIGLLAAI VLENRERRLLAVSLLTIVLGGGAVILHAALHDRDAFWSLTLSSLLLYTIAGFVLLEQLYRSAREQQKWMIKHLSIALVCF FGFDLYFFSTALVMGGLDIDLLTARGYVAAFLALMATVSISRLNGHSERLHLSHGAAFQSMILVACGLYLVSMAAIGYYL RHIGGAWGGPLEIVFFFATLALLGIGLSSGALRARLRVIVSKHFFKYRYDYRNEWLGFTATITGAGSEGLHERIVKAVAA IIESTGGALWTRSVEDGVLLPTARWNMGASPLPAIPLDSSLCRYLQSQAWVVDLSEALTFPDRYPGLTLPDWLAEHPRAG LCVPLILREELQGVLVLGPLRAPRKLVWEDLDILKTVGCHAAGYLSEERALNRLSDAQRLDAFNRRFAFVIHDIKNVVSQ MCLMAKNAERFGDNPDFQKDMIATVVHSADRLQKLLQDLKAAGQTPDPAALSPAAVPLAEVVREAGERWRALKPDLLVDL APDWAPNSAIVCSGREMASVLDHLLQNAIDAVATTGGTVRLSHREGGGQAIVEVADEGPGMEDAFIADGLFRPLNSTKST GLGIGAFQCREIVRRMGGQLTVTSDRGRGTRMTVLLPDRTAQARRGAA
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 74721; Mature: 74721
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMVVGYCLACAAFLVLIVQAVSGRRRTGRERLVLAMPLVAGALWAGVTAARAVVPLPDW CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHEECCCHH AFVLAEIGRAACWIGLLAAIVLENRERRLLAVSLLTIVLGGGAVILHAALHDRDAFWSLT HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHEEHHHHHCCHHHHHHH LSSLLLYTIAGFVLLEQLYRSAREQQKWMIKHLSIALVCFFGFDLYFFSTALVMGGLDID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LLTARGYVAAFLALMATVSISRLNGHSERLHLSHGAAFQSMILVACGLYLVSMAAIGYYL EEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH RHIGGAWGGPLEIVFFFATLALLGIGLSSGALRARLRVIVSKHFFKYRYDYRNEWLGFTA HHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TITGAGSEGLHERIVKAVAAIIESTGGALWTRSVEDGVLLPTARWNMGASPLPAIPLDSS EEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCHH LCRYLQSQAWVVDLSEALTFPDRYPGLTLPDWLAEHPRAGLCVPLILREELQGVLVLGPL HHHHHHCCCCEEEHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEECC RAPRKLVWEDLDILKTVGCHAAGYLSEERALNRLSDAQRLDAFNRRFAFVIHDIKNVVSQ CCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCLMAKNAERFGDNPDFQKDMIATVVHSADRLQKLLQDLKAAGQTPDPAALSPAAVPLAE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHH VVREAGERWRALKPDLLVDLAPDWAPNSAIVCSGREMASVLDHLLQNAIDAVATTGGTVR HHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEE LSHREGGGQAIVEVADEGPGMEDAFIADGLFRPLNSTKSTGLGIGAFQCREIVRRMGGQL EEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEE TVTSDRGRGTRMTVLLPDRTAQARRGAA EEEECCCCCCEEEEEECCCCHHHCCCCC >Mature Secondary Structure MVMVVGYCLACAAFLVLIVQAVSGRRRTGRERLVLAMPLVAGALWAGVTAARAVVPLPDW CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHEECCCHH AFVLAEIGRAACWIGLLAAIVLENRERRLLAVSLLTIVLGGGAVILHAALHDRDAFWSLT HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHEEHHHHHCCHHHHHHH LSSLLLYTIAGFVLLEQLYRSAREQQKWMIKHLSIALVCFFGFDLYFFSTALVMGGLDID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LLTARGYVAAFLALMATVSISRLNGHSERLHLSHGAAFQSMILVACGLYLVSMAAIGYYL EEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH RHIGGAWGGPLEIVFFFATLALLGIGLSSGALRARLRVIVSKHFFKYRYDYRNEWLGFTA HHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TITGAGSEGLHERIVKAVAAIIESTGGALWTRSVEDGVLLPTARWNMGASPLPAIPLDSS EEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCHH LCRYLQSQAWVVDLSEALTFPDRYPGLTLPDWLAEHPRAGLCVPLILREELQGVLVLGPL HHHHHHCCCCEEEHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEECC RAPRKLVWEDLDILKTVGCHAAGYLSEERALNRLSDAQRLDAFNRRFAFVIHDIKNVVSQ CCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCLMAKNAERFGDNPDFQKDMIATVVHSADRLQKLLQDLKAAGQTPDPAALSPAAVPLAE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHH VVREAGERWRALKPDLLVDLAPDWAPNSAIVCSGREMASVLDHLLQNAIDAVATTGGTVR HHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEE LSHREGGGQAIVEVADEGPGMEDAFIADGLFRPLNSTKSTGLGIGAFQCREIVRRMGGQL EEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEE TVTSDRGRGTRMTVLLPDRTAQARRGAA EEEECCCCCCEEEEEECCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3671068 [H]