| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yoaE [H]
Identifier: 83594202
GI number: 83594202
Start: 3305472
End: 3307040
Strand: Direct
Name: yoaE [H]
Synonym: Rru_A2870
Alternate gene names: 83594202
Gene position: 3305472-3307040 (Clockwise)
Preceding gene: 83594201
Following gene: 83594206
Centisome position: 75.94
GC content: 63.03
Gene sequence:
>1569_bases ATGATGTTCGAATGGATCGCTGACCCCTCCGCCTGGGTAGGTTTGGCCACCCTGGTGCTGCTGGAGATCGTTCTGGGGAT CGACAATCTCGTCTTCATCGCGATTCTCGCCGACAAGCTGCCGCCATCCCAGCGCAACAAGGCCCGCCTGCTCGGCCTGT CGCTGGCCCTGATCATGCGCCTTGGGCTGCTGGCCTCGATCTCGTGGATCGTCACCCTGACCCAGCCGTTGTTCACCGTT TACGGTTTCGGCTTTTCGGGACGCGACCTGATCTTGCTGATCGGCGGCCTGTTCTTGATGTTCAAGGGCACGATGGAACT GCACGAGCGCCTGGAGGGCGCCGAGGGGCCCAAGGAAGGCAAGGTGGTTCACGCCGTCTTCTGGCAGGTCATCGTCCAGA TCGTCGTTCTCGATGCCGTCTTCTCGCTTGATTCGGTGATCACCGCCGTTGGCATGATCAGCCATCTGTCGGTGATGATG ATCGCCGTGGTCGTGGCGATGGCGGTGATGATGGCCGCCTCCAAGCCGTTGATGGCTTTTGTGTCGCGCCATCCGACCGT GGTGATCCTCTGCCTGGGCTTTTTGATGATGATCGGCTTCTCGCTGATCGTCGAAGGCTTCGGCTTCCATATCCCCAAGG GGTATCTCTACGCCGCCATCGGCTTCTCGATCCTGATCGAGGCCTTCAATCAGGTCGCCCGGCGCAACCGCGAACGCATC ACCAGCACCAGTGACCTGCGCGAGCGCACGGCCAATGCCGTTCTTAGCCTGATCGGCGGCCGGTCGGCCGAACAGGGCCT GGGGGAAACCGCCGATGTCGTCGCCGACCGCGGGGCGGTGAAGCAGATCTTCGCCCCCGAGGAAAAGGACATGATCCACG GGGTGCTGACCCTGGCCGAGCGGCCGGTGAAGTCGATCATGACGCCGCGCCCCGATATCGACTGGCTCGACCTCGATTCC CCCAAGGATGAACTGCGCGCCGAAATCCTGTCGATGGGGCATTCGCGCTTCCTGCTCGCCCATGGCAGCCTCGACCAGTT CATCGGCGTCGCCCTGGCCCGCGACCTGATGCGCGACCTGATGGAAGAGGGCCAGATCAACCTGGAACGCTCGGTGCGCC AGCCGCTGGTCGTCCATGAAAGCGTCAAGGTTCTGCGGCTGATGGAGCAATTGCGCCAGTCGCCGCTGCAGGTCGCCGTC GTGCTTGACGAATACGGCTCGCTCGAAGGCATCGCCACCCCGACCGATATCCTGGAAGCCATCGCCGGCGAGTTCCCCGA CGAGGACGAGGATTACGTGACCGTGGAGCGCGGCGAGGACGGATCCTGGCTGGTCGAAGGCTGGCTCGACATCCGCCGCA TCTCCAACATCATCGGCGTCGATCTGGTCGACGAGGCCGATCGCTATTCCACCCTGGCCGGATACATTCTTTGGCAACTC GGCCATCTGCCCACCGAGGGCGAGCGGGTGATCAAGGGCGATCTGGTCGTCGAGGTCGTCTCGATGCAGGGCCGCAGCAT CGACAAGGTGCGTCTCCACTTCGAGAACACCGACGGCGAGGGGGCCTAA
Upstream 100 bases:
>100_bases TTTCTATACGGTGATCAAAGGTGCCTTCTTTCTTATCGCCAATGCCTTTTCATGAACTGAGCGGCCGCTCGTTGCGGGCC TTTGCCGCAGGAAAGAACCG
Downstream 100 bases:
>100_bases CCCCCTCGCCGCCGAGGCTCGCGAGAAGCCTAGCCGGCCAGTTGGTCGTGGACCAGCCCCACCCAATAGCTCGCCCCTAC GCCCAGAAGGGCGTCGTTGA
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMRLGLLASISWIVTLTQPLFTV YGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEGKVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMM IAVVVAMAVMMAASKPLMAFVSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAERPVKSIMTPRPDIDWLDLDS PKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDLMEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAV VLDEYGSLEGIATPTDILEAIAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA
Sequences:
>Translated_522_residues MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMRLGLLASISWIVTLTQPLFTV YGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEGKVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMM IAVVVAMAVMMAASKPLMAFVSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAERPVKSIMTPRPDIDWLDLDS PKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDLMEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAV VLDEYGSLEGIATPTDILEAIAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA >Mature_522_residues MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMRLGLLASISWIVTLTQPLFTV YGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEGKVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMM IAVVVAMAVMMAASKPLMAFVSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAERPVKSIMTPRPDIDWLDLDS PKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDLMEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAV VLDEYGSLEGIATPTDILEAIAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=509, Percent_Identity=53.2416502946955, Blast_Score=506, Evalue=1e-144, Organism=Escherichia coli, GI87082033, Length=523, Percent_Identity=50.0956022944551, Blast_Score=481, Evalue=1e-137, Organism=Escherichia coli, GI1789197, Length=239, Percent_Identity=53.5564853556485, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI1790664, Length=239, Percent_Identity=25.9414225941423, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1786879, Length=210, Percent_Identity=29.5238095238095, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI145693175, Length=230, Percent_Identity=26.9565217391304, Blast_Score=82, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 57536; Mature: 57536
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LGLLASISWIVTLTQPLFTVYGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC KVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMMIAVVVAMAVMMAASKPLMAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAE CCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHH RPVKSIMTPRPDIDWLDLDSPKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDL HHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH MEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAVVLDEYGSLEGIATPTDILEA HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCHHHHHHH IAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL HHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA CCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LGLLASISWIVTLTQPLFTVYGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC KVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMMIAVVVAMAVMMAASKPLMAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAE CCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHH RPVKSIMTPRPDIDWLDLDSPKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDL HHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH MEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAVVLDEYGSLEGIATPTDILEA HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCHHHHHHH IAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL HHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA CCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]