Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is yoaE [H]

Identifier: 83594202

GI number: 83594202

Start: 3305472

End: 3307040

Strand: Direct

Name: yoaE [H]

Synonym: Rru_A2870

Alternate gene names: 83594202

Gene position: 3305472-3307040 (Clockwise)

Preceding gene: 83594201

Following gene: 83594206

Centisome position: 75.94

GC content: 63.03

Gene sequence:

>1569_bases
ATGATGTTCGAATGGATCGCTGACCCCTCCGCCTGGGTAGGTTTGGCCACCCTGGTGCTGCTGGAGATCGTTCTGGGGAT
CGACAATCTCGTCTTCATCGCGATTCTCGCCGACAAGCTGCCGCCATCCCAGCGCAACAAGGCCCGCCTGCTCGGCCTGT
CGCTGGCCCTGATCATGCGCCTTGGGCTGCTGGCCTCGATCTCGTGGATCGTCACCCTGACCCAGCCGTTGTTCACCGTT
TACGGTTTCGGCTTTTCGGGACGCGACCTGATCTTGCTGATCGGCGGCCTGTTCTTGATGTTCAAGGGCACGATGGAACT
GCACGAGCGCCTGGAGGGCGCCGAGGGGCCCAAGGAAGGCAAGGTGGTTCACGCCGTCTTCTGGCAGGTCATCGTCCAGA
TCGTCGTTCTCGATGCCGTCTTCTCGCTTGATTCGGTGATCACCGCCGTTGGCATGATCAGCCATCTGTCGGTGATGATG
ATCGCCGTGGTCGTGGCGATGGCGGTGATGATGGCCGCCTCCAAGCCGTTGATGGCTTTTGTGTCGCGCCATCCGACCGT
GGTGATCCTCTGCCTGGGCTTTTTGATGATGATCGGCTTCTCGCTGATCGTCGAAGGCTTCGGCTTCCATATCCCCAAGG
GGTATCTCTACGCCGCCATCGGCTTCTCGATCCTGATCGAGGCCTTCAATCAGGTCGCCCGGCGCAACCGCGAACGCATC
ACCAGCACCAGTGACCTGCGCGAGCGCACGGCCAATGCCGTTCTTAGCCTGATCGGCGGCCGGTCGGCCGAACAGGGCCT
GGGGGAAACCGCCGATGTCGTCGCCGACCGCGGGGCGGTGAAGCAGATCTTCGCCCCCGAGGAAAAGGACATGATCCACG
GGGTGCTGACCCTGGCCGAGCGGCCGGTGAAGTCGATCATGACGCCGCGCCCCGATATCGACTGGCTCGACCTCGATTCC
CCCAAGGATGAACTGCGCGCCGAAATCCTGTCGATGGGGCATTCGCGCTTCCTGCTCGCCCATGGCAGCCTCGACCAGTT
CATCGGCGTCGCCCTGGCCCGCGACCTGATGCGCGACCTGATGGAAGAGGGCCAGATCAACCTGGAACGCTCGGTGCGCC
AGCCGCTGGTCGTCCATGAAAGCGTCAAGGTTCTGCGGCTGATGGAGCAATTGCGCCAGTCGCCGCTGCAGGTCGCCGTC
GTGCTTGACGAATACGGCTCGCTCGAAGGCATCGCCACCCCGACCGATATCCTGGAAGCCATCGCCGGCGAGTTCCCCGA
CGAGGACGAGGATTACGTGACCGTGGAGCGCGGCGAGGACGGATCCTGGCTGGTCGAAGGCTGGCTCGACATCCGCCGCA
TCTCCAACATCATCGGCGTCGATCTGGTCGACGAGGCCGATCGCTATTCCACCCTGGCCGGATACATTCTTTGGCAACTC
GGCCATCTGCCCACCGAGGGCGAGCGGGTGATCAAGGGCGATCTGGTCGTCGAGGTCGTCTCGATGCAGGGCCGCAGCAT
CGACAAGGTGCGTCTCCACTTCGAGAACACCGACGGCGAGGGGGCCTAA

Upstream 100 bases:

>100_bases
TTTCTATACGGTGATCAAAGGTGCCTTCTTTCTTATCGCCAATGCCTTTTCATGAACTGAGCGGCCGCTCGTTGCGGGCC
TTTGCCGCAGGAAAGAACCG

Downstream 100 bases:

>100_bases
CCCCCTCGCCGCCGAGGCTCGCGAGAAGCCTAGCCGGCCAGTTGGTCGTGGACCAGCCCCACCCAATAGCTCGCCCCTAC
GCCCAGAAGGGCGTCGTTGA

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMRLGLLASISWIVTLTQPLFTV
YGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEGKVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMM
IAVVVAMAVMMAASKPLMAFVSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI
TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAERPVKSIMTPRPDIDWLDLDS
PKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDLMEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAV
VLDEYGSLEGIATPTDILEAIAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL
GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA

Sequences:

>Translated_522_residues
MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMRLGLLASISWIVTLTQPLFTV
YGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEGKVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMM
IAVVVAMAVMMAASKPLMAFVSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI
TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAERPVKSIMTPRPDIDWLDLDS
PKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDLMEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAV
VLDEYGSLEGIATPTDILEAIAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL
GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA
>Mature_522_residues
MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMRLGLLASISWIVTLTQPLFTV
YGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEGKVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMM
IAVVVAMAVMMAASKPLMAFVSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI
TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAERPVKSIMTPRPDIDWLDLDS
PKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDLMEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAV
VLDEYGSLEGIATPTDILEAIAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL
GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Escherichia coli, GI1788119, Length=509, Percent_Identity=53.2416502946955, Blast_Score=506, Evalue=1e-144,
Organism=Escherichia coli, GI87082033, Length=523, Percent_Identity=50.0956022944551, Blast_Score=481, Evalue=1e-137,
Organism=Escherichia coli, GI1789197, Length=239, Percent_Identity=53.5564853556485, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1790664, Length=239, Percent_Identity=25.9414225941423, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1786879, Length=210, Percent_Identity=29.5238095238095, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI145693175, Length=230, Percent_Identity=26.9565217391304, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR005496
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 57536; Mature: 57536

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LGLLASISWIVTLTQPLFTVYGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC
KVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMMIAVVVAMAVMMAASKPLMAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAE
CCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHH
RPVKSIMTPRPDIDWLDLDSPKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDL
HHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
MEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAVVLDEYGSLEGIATPTDILEA
HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCHHHHHHH
IAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL
HHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH
GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA
CCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MMFEWIADPSAWVGLATLVLLEIVLGIDNLVFIAILADKLPPSQRNKARLLGLSLALIMR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LGLLASISWIVTLTQPLFTVYGFGFSGRDLILLIGGLFLMFKGTMELHERLEGAEGPKEG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC
KVVHAVFWQVIVQIVVLDAVFSLDSVITAVGMISHLSVMMIAVVVAMAVMMAASKPLMAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VSRHPTVVILCLGFLMMIGFSLIVEGFGFHIPKGYLYAAIGFSILIEAFNQVARRNRERI
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSTSDLRERTANAVLSLIGGRSAEQGLGETADVVADRGAVKQIFAPEEKDMIHGVLTLAE
CCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHH
RPVKSIMTPRPDIDWLDLDSPKDELRAEILSMGHSRFLLAHGSLDQFIGVALARDLMRDL
HHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
MEEGQINLERSVRQPLVVHESVKVLRLMEQLRQSPLQVAVVLDEYGSLEGIATPTDILEA
HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCHHHHHHH
IAGEFPDEDEDYVTVERGEDGSWLVEGWLDIRRISNIIGVDLVDEADRYSTLAGYILWQL
HHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH
GHLPTEGERVIKGDLVVEVVSMQGRSIDKVRLHFENTDGEGA
CCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]