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The map label for this gene is ycaQ [H]

Identifier: 83594125

GI number: 83594125

Start: 3227291

End: 3228472

Strand: Direct

Name: ycaQ [H]

Synonym: Rru_A2793

Alternate gene names: 83594125

Gene position: 3227291-3228472 (Clockwise)

Preceding gene: 83594124

Following gene: 83594126

Centisome position: 74.14

GC content: 70.05

Gene sequence:

>1182_bases
ATGGGGCCGCGCGCGCTCTCGGCCCTGGAAGCCCGCCGCATCGCCTTGCGGGCCCAGGGCTTCGGCCGCGCCCGGCCCCC
TACGCCAAGCCCCCGCCATCTCGACGCCGTGACCCGCCGTCTCGGCTTGGTGCAGATGGACTCGATCAATGTTCTGGCCC
GCGCCCATGCCATGCCGGCCTTCTCGCGGCTTGGCCCCTATGACAAGGCCCTGCTGGAAACCGCCAGCTACGATCCGCGC
CGGCGCACCTTGTTCGAATATTGGGGCCATGAGGCCTCGCTGATCCGCCTCGAGTTGCAGCCGGCCCTGCGCTGGCGGAT
GGAGGATGCCCGGGCCGGCCTCGGCCTTTACAGTGGTTTGGCGCGCTTTGCCGTCGAGCGCCGGGCGGTGATCGACGGCG
TTCTGGCGGCGCTGGCCGCCCATGGCCCGGCCTCGGCCCGCGACCTTGATCCCGGACAAAAGCGCAATGGCGCCTGGTGG
GGCTGGGGCGAGACCAAGGCCGCCCTGGAATGGTTGTTCTGGGGCGGGCTGGTCACCACCCTGAGGCGCCGGGGGTTCGA
GCGCGTCTATGATCTGACCGAGCGCGCCCTGCCCGCCAGCGTGCTCGCCCGCCCCACCCCGCCACGCGCCGAGGCGCTGC
GGATCCTTGTCACCCAGGCGGCCTCGGCCCTGGGGGTGGCGACGGCGAGCGACCTGCGGCTTTACTTCCGCCTGCCGGCG
ACTGACGCCAATCGCGCCATCGCCGAACTGGTCGAAGAGGGCACCCTTCAGCCCGTTGCCGTCGCCGGCTGGGGCCAGCC
GGCCTATCTAAGCGCCGATCCGCCGTCGAGCGGGCCTTTGCGGGCCCAAGCCATCGTCTCGCCCTTTGATCCCTTGCTGT
TCGAGCGCGCCCGCGTCGAACGCCTGTTCGGCTTCACCTACCGCATCGAGATCTATGTTCCCGCCGCCAAGCGCCAATAC
GGCTATTACACCCTGCCCCTGCTGCTAGGCGACACCCTGGTCGGCCGCGTCGATCTGCGAGCCGAGCGCAAAGCGCGAAG
GCTGGTGGTGGCCAGCGCGCACCTGGAGAAAACCGCCAACCGCGAGGCCGTGACCGCCGCCCTTTGCCTGGAGCTGGCCG
AGATTGCCCGCTGGCAAAACCTTGATCCCCCGGCGGAAATCGCCTTTGACCCGCCAAAGTGA

Upstream 100 bases:

>100_bases
GAAAGAGGTCGCGCCGCTGGTCTTCGCCGATGTCGGGGTGTTCACCGACAGCGACGGCTTCGAAAGCGTCGGCGTCGGCC
ACCACAAGGTTTAAGCGCCG

Downstream 100 bases:

>100_bases
CGGGGAATCGGCGCAACCGGTGGACCTTTCGCCCAATTCATGGAATCTTCGCCGCCATTCTTCACGCTTTTTGTCGCCCC
CGGAGCACCCGCCCCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MGPRALSALEARRIALRAQGFGRARPPTPSPRHLDAVTRRLGLVQMDSINVLARAHAMPAFSRLGPYDKALLETASYDPR
RRTLFEYWGHEASLIRLELQPALRWRMEDARAGLGLYSGLARFAVERRAVIDGVLAALAAHGPASARDLDPGQKRNGAWW
GWGETKAALEWLFWGGLVTTLRRRGFERVYDLTERALPASVLARPTPPRAEALRILVTQAASALGVATASDLRLYFRLPA
TDANRAIAELVEEGTLQPVAVAGWGQPAYLSADPPSSGPLRAQAIVSPFDPLLFERARVERLFGFTYRIEIYVPAAKRQY
GYYTLPLLLGDTLVGRVDLRAERKARRLVVASAHLEKTANREAVTAALCLELAEIARWQNLDPPAEIAFDPPK

Sequences:

>Translated_393_residues
MGPRALSALEARRIALRAQGFGRARPPTPSPRHLDAVTRRLGLVQMDSINVLARAHAMPAFSRLGPYDKALLETASYDPR
RRTLFEYWGHEASLIRLELQPALRWRMEDARAGLGLYSGLARFAVERRAVIDGVLAALAAHGPASARDLDPGQKRNGAWW
GWGETKAALEWLFWGGLVTTLRRRGFERVYDLTERALPASVLARPTPPRAEALRILVTQAASALGVATASDLRLYFRLPA
TDANRAIAELVEEGTLQPVAVAGWGQPAYLSADPPSSGPLRAQAIVSPFDPLLFERARVERLFGFTYRIEIYVPAAKRQY
GYYTLPLLLGDTLVGRVDLRAERKARRLVVASAHLEKTANREAVTAALCLELAEIARWQNLDPPAEIAFDPPK
>Mature_392_residues
GPRALSALEARRIALRAQGFGRARPPTPSPRHLDAVTRRLGLVQMDSINVLARAHAMPAFSRLGPYDKALLETASYDPRR
RTLFEYWGHEASLIRLELQPALRWRMEDARAGLGLYSGLARFAVERRAVIDGVLAALAAHGPASARDLDPGQKRNGAWWG
WGETKAALEWLFWGGLVTTLRRRGFERVYDLTERALPASVLARPTPPRAEALRILVTQAASALGVATASDLRLYFRLPAT
DANRAIAELVEEGTLQPVAVAGWGQPAYLSADPPSSGPLRAQAIVSPFDPLLFERARVERLFGFTYRIEIYVPAAKRQYG
YYTLPLLLGDTLVGRVDLRAERKARRLVVASAHLEKTANREAVTAALCLELAEIARWQNLDPPAEIAFDPPK

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=396, Percent_Identity=33.0808080808081, Blast_Score=171, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 43419; Mature: 43288

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPRALSALEARRIALRAQGFGRARPPTPSPRHLDAVTRRLGLVQMDSINVLARAHAMPA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHCCH
FSRLGPYDKALLETASYDPRRRTLFEYWGHEASLIRLELQPALRWRMEDARAGLGLYSGL
HHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHH
ARFAVERRAVIDGVLAALAAHGPASARDLDPGQKRNGAWWGWGETKAALEWLFWGGLVTT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LRRRGFERVYDLTERALPASVLARPTPPRAEALRILVTQAASALGVATASDLRLYFRLPA
HHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
TDANRAIAELVEEGTLQPVAVAGWGQPAYLSADPPSSGPLRAQAIVSPFDPLLFERARVE
CCHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHH
RLFGFTYRIEIYVPAAKRQYGYYTLPLLLGDTLVGRVDLRAERKARRLVVASAHLEKTAN
HHHCEEEEEEEEEECCCCCCCCEEHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
REAVTAALCLELAEIARWQNLDPPAEIAFDPPK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GPRALSALEARRIALRAQGFGRARPPTPSPRHLDAVTRRLGLVQMDSINVLARAHAMPA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHCCH
FSRLGPYDKALLETASYDPRRRTLFEYWGHEASLIRLELQPALRWRMEDARAGLGLYSGL
HHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHH
ARFAVERRAVIDGVLAALAAHGPASARDLDPGQKRNGAWWGWGETKAALEWLFWGGLVTT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LRRRGFERVYDLTERALPASVLARPTPPRAEALRILVTQAASALGVATASDLRLYFRLPA
HHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
TDANRAIAELVEEGTLQPVAVAGWGQPAYLSADPPSSGPLRAQAIVSPFDPLLFERARVE
CCHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHH
RLFGFTYRIEIYVPAAKRQYGYYTLPLLLGDTLVGRVDLRAERKARRLVVASAHLEKTAN
HHHCEEEEEEEEEECCCCCCCCEEHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
REAVTAALCLELAEIARWQNLDPPAEIAFDPPK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]