| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593944
Identifier: 83593944
GI number: 83593944
Start: 3039477
End: 3040352
Strand: Reverse
Name: 83593944
Synonym: Rru_A2612
Alternate gene names: NA
Gene position: 3040352-3039477 (Counterclockwise)
Preceding gene: 83593945
Following gene: 83593938
Centisome position: 69.85
GC content: 69.52
Gene sequence:
>876_bases ATGACCGGCATCCGCACCATTCTTAGTGTCGTGGGCGATGAGGCAACGGGGGAGGCCCCCTTGCGGACGGCCCTCGTTCT CGCCCGTGATTTGGGCTGCCATGTCGAGGGTTTCCATGTTCGGATCGACGCGTCGGCCGCCGTGCCCTATGTGGGCGAGG CGATGGCCGGGGCCTTGGTCGAAGAAATGGTGGAAGCCGCCGAGAAGGAAGCTCGCGAGCGCGCCGCCAAAGCCCACGGG CTTTTCACCCGCGTCTGCGCCGAACTGGCGATCGTTCTTGACGATACCCCGCCGGGCCCGGGCGGCCCCAGCGCCTCTTG GCAGGAGGCGCGGGGAGCCGAGCCCGAGCATGTGGCGATGCGCGGCCGTGTCGCCGATCTTCTCGTGCTGGGGCAGCCCG GTCTGCACGGCGAACCGCCGTCGCTGCTGACCCTGAACGCCGCCTTGCTTGAAAGCGGCCGGCCGGTTCTGGTCGCCCCG CCCCAGGCCCCCGCCGAGATCGGTCGGCGCATCGCCATCGCCTGGAACGGCAGCGCCGAAGCCGCCCGCGCCGTGATGGG GGCGATGCCCTTCCTGGTGGCCGCCCAGGAGGTGACGGTGCTGATCGCCGAGATCGACGAGGAGGGGGCCGATGCCACCG CCCACGAACTGGAACGCCATTTGGCGTGGCATGGGGTCAAGGCCGGGGTGCGGGTGCTGCATGCGGCGGCGGGAACCCGG GCGGGCGAGGCCCTGGTCGCCGCCTGTGACGAGGTCAAGGCCGATCTGCTGGTGATGGGCGCCTATACCCATAGCCGCCT GCGTCAATTGATCCTGGGCGGCGTGACCCGTCATCTGTTGGGCAATGCCCGCATTCCCCTGTTGCTCTCCCACTAA
Upstream 100 bases:
>100_bases TTGGGGCTAAGTAGTTGACCTTCATCCTTTTATTGCGTTCTCTCCGGGCGCATAATGATCCCTGACGTTTTCTAGGTCTA TCAAGATCAGGAGTATCGCG
Downstream 100 bases:
>100_bases CAGGCTGCGGAAAAACCTATCTGTTCGCCCCCTTTCCCCCTCTTCCAGCGTTGTTTGACGGTGCTGGCGTGGGGTTACGG GCCGCGTTTGCGGCCGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTGIRTILSVVGDEATGEAPLRTALVLARDLGCHVEGFHVRIDASAAVPYVGEAMAGALVEEMVEAAEKEARERAAKAHG LFTRVCAELAIVLDDTPPGPGGPSASWQEARGAEPEHVAMRGRVADLLVLGQPGLHGEPPSLLTLNAALLESGRPVLVAP PQAPAEIGRRIAIAWNGSAEAARAVMGAMPFLVAAQEVTVLIAEIDEEGADATAHELERHLAWHGVKAGVRVLHAAAGTR AGEALVAACDEVKADLLVMGAYTHSRLRQLILGGVTRHLLGNARIPLLLSH
Sequences:
>Translated_291_residues MTGIRTILSVVGDEATGEAPLRTALVLARDLGCHVEGFHVRIDASAAVPYVGEAMAGALVEEMVEAAEKEARERAAKAHG LFTRVCAELAIVLDDTPPGPGGPSASWQEARGAEPEHVAMRGRVADLLVLGQPGLHGEPPSLLTLNAALLESGRPVLVAP PQAPAEIGRRIAIAWNGSAEAARAVMGAMPFLVAAQEVTVLIAEIDEEGADATAHELERHLAWHGVKAGVRVLHAAAGTR AGEALVAACDEVKADLLVMGAYTHSRLRQLILGGVTRHLLGNARIPLLLSH >Mature_290_residues TGIRTILSVVGDEATGEAPLRTALVLARDLGCHVEGFHVRIDASAAVPYVGEAMAGALVEEMVEAAEKEARERAAKAHGL FTRVCAELAIVLDDTPPGPGGPSASWQEARGAEPEHVAMRGRVADLLVLGQPGLHGEPPSLLTLNAALLESGRPVLVAPP QAPAEIGRRIAIAWNGSAEAARAVMGAMPFLVAAQEVTVLIAEIDEEGADATAHELERHLAWHGVKAGVRVLHAAAGTRA GEALVAACDEVKADLLVMGAYTHSRLRQLILGGVTRHLLGNARIPLLLSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30356; Mature: 30225
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIRTILSVVGDEATGEAPLRTALVLARDLGCHVEGFHVRIDASAAVPYVGEAMAGALV CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHH EEMVEAAEKEARERAAKAHGLFTRVCAELAIVLDDTPPGPGGPSASWQEARGAEPEHVAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHCCCCCHHHHH RGRVADLLVLGQPGLHGEPPSLLTLNAALLESGRPVLVAPPQAPAEIGRRIAIAWNGSAE HCCCEEEEEECCCCCCCCCCCEEEEHHHHHHCCCEEEEECCCCHHHHCCEEEEEECCCHH AARAVMGAMPFLVAAQEVTVLIAEIDEEGADATAHELERHLAWHGVKAGVRVLHAAAGTR HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGEALVAACDEVKADLLVMGAYTHSRLRQLILGGVTRHLLGNARIPLLLSH CCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure TGIRTILSVVGDEATGEAPLRTALVLARDLGCHVEGFHVRIDASAAVPYVGEAMAGALV CHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHH EEMVEAAEKEARERAAKAHGLFTRVCAELAIVLDDTPPGPGGPSASWQEARGAEPEHVAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHCCCCCHHHHH RGRVADLLVLGQPGLHGEPPSLLTLNAALLESGRPVLVAPPQAPAEIGRRIAIAWNGSAE HCCCEEEEEECCCCCCCCCCCEEEEHHHHHHCCCEEEEECCCCHHHHCCEEEEEECCCHH AARAVMGAMPFLVAAQEVTVLIAEIDEEGADATAHELERHLAWHGVKAGVRVLHAAAGTR HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGEALVAACDEVKADLLVMGAYTHSRLRQLILGGVTRHLLGNARIPLLLSH CCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA