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The map label for this gene is aatC [H]

Identifier: 83593746

GI number: 83593746

Start: 2811453

End: 2812694

Strand: Reverse

Name: aatC [H]

Synonym: Rru_A2411

Alternate gene names: 83593746

Gene position: 2812694-2811453 (Counterclockwise)

Preceding gene: 83593747

Following gene: 83593745

Centisome position: 64.62

GC content: 64.09

Gene sequence:

>1242_bases
ATGGACCATGATTTCTACCGGATCAAGCGCCTGCCGCCCTATGTCTTCGCCGAAGTGAACGCGATGAAGGCCCGGGCACG
GGCCGCCGGTGACGATATCATCGACCTCGGCATGGGCAATCCGGACCAGCCCACGCCCCAGCATATCGTTGACAAGCTTT
GCGAGGCGGCGACCAACCCCCGGGCGCACGGCTATTCGATGTCGCGCGGCATCCCCGGGTTGCGCAAGGCGCTGGCCGGC
TATTATGCCCGGCGCTTCAATGTCGAGCTTGATCCCGAAACCGAGGCGATCGTCACCCTGGGCTCGAAGGAAGGTCTGGC
CAACCTCGCCCAGGCGATCACCAGCCCCGGCGATATCGTGCTCGCCCCCAATCCCAGCTATCCGATCCACGCCTTCGGCT
TCATCATCGCCGGCGGCGCGGTGCGCCATATTCCGGCCAAGCCCGGTCCCGAATTCCTTGAGGCGATGGAGCGCGGGGTG
CGCCATTCGGTGCCCAAGCCGGTGGCTGTGCTGATCAACTTCCCGTCCAATCCCACCGCCTATGTCGCCGATCTTGATTT
CTATGGACAGGTCGTTGATTTCTGCCGTCACCATGGTATCTGGATCCTGTCGGACATCGCCTATTCCGAGATCTATTTCG
ATCACAAGCCGCCGCCCTCGGTGCTGCAGATCCCCGGGGCCAAGGAGGTGGCGATCGAATTCACCTCGCTGTCCAAAACC
TACAACATGCCGGGCTGGCGGATCGGCTTCGCCGCCGGCAACCGCCATCTGATCGGCGCGCTCACCCGCATCAAATCCTA
TCTCGACTATGGCGCCTTCACCCCCGTCCAGGTGGCGGCGACGGCGGCTTTGAACGGACCGCAAGACTGCGTCGAGGATA
TCCGCACGCTGTACCGCGAGCGCCGCGACGTGCTGATCGACGGGCTGGCCCAGGCCGGGTGGGATATTCCCTCGCCGCCG
GCCAGCATGTTCGCCTGGGCGCCGCTGCCCAAGGGCTTTGAGCATCTGGGATCGCTGGAATTCTCCAAGCTGCTGATGCG
CGAGGCCAAGGTGGCGGTCAGTCCCGGCGTCGGCTTTGGCGAATACGGCGATAGCCATGTGCGAATCGCCCTGGTCGAGA
ACAAGCACCGCATCCGTCAGGCGGTGCGCAATATCAAGGCCTTCCTGGGCGGTGGCCAGGGGGGCGAAACCGGCCTGGGC
GCCAAGGGCGAGGACAAACAGAAGGCGGACGAAGCGGTATGA

Upstream 100 bases:

>100_bases
ACCGGATGAGCTTTCCGCCCGCGTTTGCCCCCGATTGGCTATCGCGCGAGAGCGTGCGACAGGATAAAAAGGGGGCCCTC
TCAAACGGAATGAACCAGCC

Downstream 100 bases:

>100_bases
ATGATCCTTTGAAAGTCGCCGTCGCCGGCCTGGGAACGGTCGGCGCCGGGGTGGTGAAGCTGCTGGCCGACCACAAGGAC
CTGCTGGCCGCCCGCGCCGG

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDHDFYRIKRLPPYVFAEVNAMKARARAAGDDIIDLGMGNPDQPTPQHIVDKLCEAATNPRAHGYSMSRGIPGLRKALAG
YYARRFNVELDPETEAIVTLGSKEGLANLAQAITSPGDIVLAPNPSYPIHAFGFIIAGGAVRHIPAKPGPEFLEAMERGV
RHSVPKPVAVLINFPSNPTAYVADLDFYGQVVDFCRHHGIWILSDIAYSEIYFDHKPPPSVLQIPGAKEVAIEFTSLSKT
YNMPGWRIGFAAGNRHLIGALTRIKSYLDYGAFTPVQVAATAALNGPQDCVEDIRTLYRERRDVLIDGLAQAGWDIPSPP
ASMFAWAPLPKGFEHLGSLEFSKLLMREAKVAVSPGVGFGEYGDSHVRIALVENKHRIRQAVRNIKAFLGGGQGGETGLG
AKGEDKQKADEAV

Sequences:

>Translated_413_residues
MDHDFYRIKRLPPYVFAEVNAMKARARAAGDDIIDLGMGNPDQPTPQHIVDKLCEAATNPRAHGYSMSRGIPGLRKALAG
YYARRFNVELDPETEAIVTLGSKEGLANLAQAITSPGDIVLAPNPSYPIHAFGFIIAGGAVRHIPAKPGPEFLEAMERGV
RHSVPKPVAVLINFPSNPTAYVADLDFYGQVVDFCRHHGIWILSDIAYSEIYFDHKPPPSVLQIPGAKEVAIEFTSLSKT
YNMPGWRIGFAAGNRHLIGALTRIKSYLDYGAFTPVQVAATAALNGPQDCVEDIRTLYRERRDVLIDGLAQAGWDIPSPP
ASMFAWAPLPKGFEHLGSLEFSKLLMREAKVAVSPGVGFGEYGDSHVRIALVENKHRIRQAVRNIKAFLGGGQGGETGLG
AKGEDKQKADEAV
>Mature_413_residues
MDHDFYRIKRLPPYVFAEVNAMKARARAAGDDIIDLGMGNPDQPTPQHIVDKLCEAATNPRAHGYSMSRGIPGLRKALAG
YYARRFNVELDPETEAIVTLGSKEGLANLAQAITSPGDIVLAPNPSYPIHAFGFIIAGGAVRHIPAKPGPEFLEAMERGV
RHSVPKPVAVLINFPSNPTAYVADLDFYGQVVDFCRHHGIWILSDIAYSEIYFDHKPPPSVLQIPGAKEVAIEFTSLSKT
YNMPGWRIGFAAGNRHLIGALTRIKSYLDYGAFTPVQVAATAALNGPQDCVEDIRTLYRERRDVLIDGLAQAGWDIPSPP
ASMFAWAPLPKGFEHLGSLEFSKLLMREAKVAVSPGVGFGEYGDSHVRIALVENKHRIRQAVRNIKAFLGGGQGGETGLG
AKGEDKQKADEAV

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713256, Length=412, Percent_Identity=23.5436893203883, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI56713254, Length=412, Percent_Identity=23.5436893203883, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI95147551, Length=316, Percent_Identity=25, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI169881279, Length=316, Percent_Identity=25, Blast_Score=102, Evalue=9e-22,
Organism=Escherichia coli, GI1788722, Length=385, Percent_Identity=56.1038961038961, Blast_Score=464, Evalue=1e-132,
Organism=Escherichia coli, GI1786816, Length=353, Percent_Identity=25.7790368271955, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788627, Length=383, Percent_Identity=25.065274151436, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71994476, Length=384, Percent_Identity=26.0416666666667, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71994472, Length=384, Percent_Identity=26.0416666666667, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17567369, Length=402, Percent_Identity=24.6268656716418, Blast_Score=103, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6322401, Length=387, Percent_Identity=22.9974160206718, Blast_Score=101, Evalue=3e-22,
Organism=Drosophila melanogaster, GI28573069, Length=407, Percent_Identity=24.0786240786241, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24646114, Length=407, Percent_Identity=24.0786240786241, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28573067, Length=407, Percent_Identity=24.0786240786241, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28573065, Length=407, Percent_Identity=24.0786240786241, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 44917; Mature: 44917

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHDFYRIKRLPPYVFAEVNAMKARARAAGDDIIDLGMGNPDQPTPQHIVDKLCEAATNP
CCCCCEEHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCC
RAHGYSMSRGIPGLRKALAGYYARRFNVELDPETEAIVTLGSKEGLANLAQAITSPGDIV
CCCCCCHHCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHCCCCCEE
LAPNPSYPIHAFGFIIAGGAVRHIPAKPGPEFLEAMERGVRHSVPKPVAVLINFPSNPTA
ECCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCE
YVADLDFYGQVVDFCRHHGIWILSDIAYSEIYFDHKPPPSVLQIPGAKEVAIEFTSLSKT
EEECHHHHHHHHHHHHHCCEEEEECHHHHHEEECCCCCCCEEECCCCCEEEEEEEHHHHH
YNMPGWRIGFAAGNRHLIGALTRIKSYLDYGAFTPVQVAATAALNGPQDCVEDIRTLYRE
CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
RRDVLIDGLAQAGWDIPSPPASMFAWAPLPKGFEHLGSLEFSKLLMREAKVAVSPGVGFG
HHHHHHHHHHHCCCCCCCCCHHHEEECCCCHHHHHHCCHHHHHHHHHHHHHEECCCCCCC
EYGDSHVRIALVENKHRIRQAVRNIKAFLGGGQGGETGLGAKGEDKQKADEAV
CCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MDHDFYRIKRLPPYVFAEVNAMKARARAAGDDIIDLGMGNPDQPTPQHIVDKLCEAATNP
CCCCCEEHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCC
RAHGYSMSRGIPGLRKALAGYYARRFNVELDPETEAIVTLGSKEGLANLAQAITSPGDIV
CCCCCCHHCCCHHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHCCCCCEE
LAPNPSYPIHAFGFIIAGGAVRHIPAKPGPEFLEAMERGVRHSVPKPVAVLINFPSNPTA
ECCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCE
YVADLDFYGQVVDFCRHHGIWILSDIAYSEIYFDHKPPPSVLQIPGAKEVAIEFTSLSKT
EEECHHHHHHHHHHHHHCCEEEEECHHHHHEEECCCCCCCEEECCCCCEEEEEEEHHHHH
YNMPGWRIGFAAGNRHLIGALTRIKSYLDYGAFTPVQVAATAALNGPQDCVEDIRTLYRE
CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
RRDVLIDGLAQAGWDIPSPPASMFAWAPLPKGFEHLGSLEFSKLLMREAKVAVSPGVGFG
HHHHHHHHHHHCCCCCCCCCHHHEEECCCCHHHHHHCCHHHHHHHHHHHHHEECCCCCCC
EYGDSHVRIALVENKHRIRQAVRNIKAFLGGGQGGETGLGAKGEDKQKADEAV
CCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 9734305 [H]