| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593747
Identifier: 83593747
GI number: 83593747
Start: 2812858
End: 2813901
Strand: Reverse
Name: 83593747
Synonym: Rru_A2412
Alternate gene names: NA
Gene position: 2813901-2812858 (Counterclockwise)
Preceding gene: 83593752
Following gene: 83593746
Centisome position: 64.65
GC content: 71.26
Gene sequence:
>1044_bases ATGACACGTGGGATGCCGGGGAGTCATCGACGCGGCGCGGCCTGGGCCGTGCTCGTCGGAACCATCGTGGCCGGAGGGCT GGTGATGGGCGGATGCTCGTCCGATAGCCCAGCCGGCGAGCGGGCGGAGACCGCCCCGGGGGATTTCCCCGATGTCAACA AGGTGCCGACCAGCCGGCCGCAGCCGCCCACCCTGGACGAACTCAACAGCGTCACCGAAGGCTTGGTCGCCGACCGCGAG GCCTCGCGCCATGCCCGCCAGGGCACCCGCCGCGCCCCCCAGGAAATCGACGCGCCGGTCTCCGAGACCCCGGTTTCCAC GCCGCCCCGGGAAGCGACCGAGGTCGGCACCATGCTGGGCGTCGGTCCGGCGGCGCCCTCGACGGCGGCCGCCGCGCCAA CCCCGGTGTCGCAGCCTTTGCCCGCCCCGGCGGGCGCGTCCGGTCAAACGATCACCCGGGTCGCCCCGGGAACGGTGGCC AATGCCCCGGCCGGTTCGCCCGGACCGGCCGCTGTCGCCGCCCGTCCCTCGGCCGCGCCGACGTCCGTGCTCCCGGCCTC CGAGGCACCGGCGATGCCCGCCGTCCCCGGATCGGGAACGGTGGTCATCGATTCCGCCGGCGTCCACCAGGAAAACTCCC TGCAAGGAAGCGCGGTGCGCAGGCTTGACGAGGCCGCCGCCCTGGCCGGCGGGGGAGCGAAGGTCGGCGTTGTCTATTTC GCCTCGAGCTCGTCCGATCTCGACAACAACGACTTGCGCGTGATCGCCGAGATCGCCGATTATCAACGCGAGAACGGCGG CGTGCTGCGCGTCATCGGCCATTCCTCCAGCCGCACCGGCGACATGGATCCGGTGAGCCACAAGATTCTCAATCTGCGGG TTTCGGCCGAGCGCGCCGACGCGGTGGCCCAGGCGCTGATGAGCGCCGGGGTGTTTCCGGCCAATATCGTCGTCGGCGCC GTGGCCGACGATCAGAAGGAATACCGGGAAGTCATGCCCTCGGGCGAGGCCTTCAATCGCCGGGCCGAGATCTTCCTCGA ATAG
Upstream 100 bases:
>100_bases CAATGAAAACGGCATAAGTTGCAGGGTTTTTTTGTTCATTCGCCTGAGCCTTGCCCCTACACTCTGCCACAGCGTAGTTG AACTGGAGTGCGTAAGAGTC
Downstream 100 bases:
>100_bases ATCGTCATCGTCAGCCCTTTCCGGCGACGATGATCGGGCCGGGGAGACGACGGGCCTCCCCGTACCGGATGAGCTTTCCG CCCGCGTTTGCCCCCGATTG
Product: OmpA/MotB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTRGMPGSHRRGAAWAVLVGTIVAGGLVMGGCSSDSPAGERAETAPGDFPDVNKVPTSRPQPPTLDELNSVTEGLVADRE ASRHARQGTRRAPQEIDAPVSETPVSTPPREATEVGTMLGVGPAAPSTAAAAPTPVSQPLPAPAGASGQTITRVAPGTVA NAPAGSPGPAAVAARPSAAPTSVLPASEAPAMPAVPGSGTVVIDSAGVHQENSLQGSAVRRLDEAAALAGGGAKVGVVYF ASSSSDLDNNDLRVIAEIADYQRENGGVLRVIGHSSSRTGDMDPVSHKILNLRVSAERADAVAQALMSAGVFPANIVVGA VADDQKEYREVMPSGEAFNRRAEIFLE
Sequences:
>Translated_347_residues MTRGMPGSHRRGAAWAVLVGTIVAGGLVMGGCSSDSPAGERAETAPGDFPDVNKVPTSRPQPPTLDELNSVTEGLVADRE ASRHARQGTRRAPQEIDAPVSETPVSTPPREATEVGTMLGVGPAAPSTAAAAPTPVSQPLPAPAGASGQTITRVAPGTVA NAPAGSPGPAAVAARPSAAPTSVLPASEAPAMPAVPGSGTVVIDSAGVHQENSLQGSAVRRLDEAAALAGGGAKVGVVYF ASSSSDLDNNDLRVIAEIADYQRENGGVLRVIGHSSSRTGDMDPVSHKILNLRVSAERADAVAQALMSAGVFPANIVVGA VADDQKEYREVMPSGEAFNRRAEIFLE >Mature_346_residues TRGMPGSHRRGAAWAVLVGTIVAGGLVMGGCSSDSPAGERAETAPGDFPDVNKVPTSRPQPPTLDELNSVTEGLVADREA SRHARQGTRRAPQEIDAPVSETPVSTPPREATEVGTMLGVGPAAPSTAAAAPTPVSQPLPAPAGASGQTITRVAPGTVAN APAGSPGPAAVAARPSAAPTSVLPASEAPAMPAVPGSGTVVIDSAGVHQENSLQGSAVRRLDEAAALAGGGAKVGVVYFA SSSSDLDNNDLRVIAEIADYQRENGGVLRVIGHSSSRTGDMDPVSHKILNLRVSAERADAVAQALMSAGVFPANIVVGAV ADDQKEYREVMPSGEAFNRRAEIFLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35101; Mature: 34970
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGMPGSHRRGAAWAVLVGTIVAGGLVMGGCSSDSPAGERAETAPGDFPDVNKVPTSRP CCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPPTLDELNSVTEGLVADREASRHARQGTRRAPQEIDAPVSETPVSTPPREATEVGTMLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHC VGPAAPSTAAAAPTPVSQPLPAPAGASGQTITRVAPGTVANAPAGSPGPAAVAARPSAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCC TSVLPASEAPAMPAVPGSGTVVIDSAGVHQENSLQGSAVRRLDEAAALAGGGAKVGVVYF CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE ASSSSDLDNNDLRVIAEIADYQRENGGVLRVIGHSSSRTGDMDPVSHKILNLRVSAERAD ECCCCCCCCCCCEEHEEHHHHHCCCCCEEEEEECCCCCCCCCCHHHHEEEEEEECHHHHH AVAQALMSAGVFPANIVVGAVADDQKEYREVMPSGEAFNRRAEIFLE HHHHHHHHCCCCCHHEEEEECCCCHHHHHHHCCCCHHHCCCEEEEEC >Mature Secondary Structure TRGMPGSHRRGAAWAVLVGTIVAGGLVMGGCSSDSPAGERAETAPGDFPDVNKVPTSRP CCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPPTLDELNSVTEGLVADREASRHARQGTRRAPQEIDAPVSETPVSTPPREATEVGTMLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHC VGPAAPSTAAAAPTPVSQPLPAPAGASGQTITRVAPGTVANAPAGSPGPAAVAARPSAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCC TSVLPASEAPAMPAVPGSGTVVIDSAGVHQENSLQGSAVRRLDEAAALAGGGAKVGVVYF CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE ASSSSDLDNNDLRVIAEIADYQRENGGVLRVIGHSSSRTGDMDPVSHKILNLRVSAERAD ECCCCCCCCCCCEEHEEHHHHHCCCCCEEEEEECCCCCCCCCCHHHHEEEEEEECHHHHH AVAQALMSAGVFPANIVVGAVADDQKEYREVMPSGEAFNRRAEIFLE HHHHHHHHCCCCCHHEEEEECCCCHHHHHHHCCCCHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA