| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is glpX [H]
Identifier: 83593744
GI number: 83593744
Start: 2808922
End: 2809929
Strand: Reverse
Name: glpX [H]
Synonym: Rru_A2409
Alternate gene names: 83593744
Gene position: 2809929-2808922 (Counterclockwise)
Preceding gene: 83593745
Following gene: 83593743
Centisome position: 64.55
GC content: 69.74
Gene sequence:
>1008_bases TTGTCCAGTGTCGCGTCATTTTCCGCCGATCCCGTTTTGTCCGCCGCCCTTGATCGCAATCTGGCCCTTGATGTGGCGCG AGTGACCGAGGCGGCTGCCATCGCCGCCGCCCGTTACATGGGGCGGGGCGACGAGCGGGCGGCGGATCTGGCGGCGACGG CGGCGATGCGCGAGGCGCTGACCACCGTGCCGATGGCCGGGACGATCACGCTGGGCGCCCTGGCCGATCCCGACGACGGT TTGTTCCGCCTGGGCGAAGGCGTGGGCAACGGCACCGGGCTGTTGATCGATGTCGGCGTTACCCCATTGGAGGGGGCGAC GATCTGCGCCATGGGGGCGCCCAACGCCACGGCCTGCATGGCTTTGGCCCGCAAGGGCGAATTGCTGGCGGTGCCGCCGG TCTATATGGAAAAGATCGCCGTTGGTCCGGGGGTGCCCGAGGGCTGCCTCAGCCTGGATGCCGATCCGGCCGAGAACATT CGCGCCCTGGCCAAGGTGCGCGGCGTCCCGGCCGAGGCGCTGCTGATCTGCGTGCTTGACCGCCCGCGTAACGAGGCCCT GGTCGACCGGGTGCGCTCGACCGGGGCGCGGATCACCCTGATCTCCGATGGCGACGTCTCGGGCGCGGTGGCCGTCGGCC TGCCCGAAACCGGGGTTGATATGTATATGGGATCGGGCGGGGCGGCCGAGGGCGTGTTGGCCGCCGCCGGTTTGCGGTGT TTGGGCGGGGTTCTTCAGGGCCGGTTGATGGTGCGCGGCGACTCCGAGAAGGCCGCCGTGCGGGCGGCCGGCATCACCGA TCCCGACCGCATCCTGACCATGGCCGATATGGTGCCGGGCGAGACGATGTTCGCCGCCACCGGGGTGACCGACGGCGCCT TGCTGCGCGGCGTGCGGCTCCACGCCGGCAGTGCCCGTTCCTCGACCCTGGTGATGCGATCGCGCACCGGAACGCTGCGT TTTATCGACACCCGCCACGATTTGTCGAAGCTGAGCGCCGATCGGTAA
Upstream 100 bases:
>100_bases GACGCCGATCGCAACGACGATTTGCTTCACTTTTAGGAACGGCCAGCCCGGCGTGGCTCTGACGGCCCGCCCGGGCGTCC CTTTGTCAGGAGTAAGGCCC
Downstream 100 bases:
>100_bases GGCAATTCCCGAGCGGTCCGGACCGGACCGCGACGGCGATTCGCGTCCCGATCAGTCTGTCAGGGCGGCGGGCGGGGACT AGGTTTCCCCCGCGCCGTTC
Product: fructose 1,6-bisphosphatase II
Products: NA
Alternate protein names: FBPase class 2; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2 [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSSVASFSADPVLSAALDRNLALDVARVTEAAAIAAARYMGRGDERAADLAATAAMREALTTVPMAGTITLGALADPDDG LFRLGEGVGNGTGLLIDVGVTPLEGATICAMGAPNATACMALARKGELLAVPPVYMEKIAVGPGVPEGCLSLDADPAENI RALAKVRGVPAEALLICVLDRPRNEALVDRVRSTGARITLISDGDVSGAVAVGLPETGVDMYMGSGGAAEGVLAAAGLRC LGGVLQGRLMVRGDSEKAAVRAAGITDPDRILTMADMVPGETMFAATGVTDGALLRGVRLHAGSARSSTLVMRSRTGTLR FIDTRHDLSKLSADR
Sequences:
>Translated_335_residues MSSVASFSADPVLSAALDRNLALDVARVTEAAAIAAARYMGRGDERAADLAATAAMREALTTVPMAGTITLGALADPDDG LFRLGEGVGNGTGLLIDVGVTPLEGATICAMGAPNATACMALARKGELLAVPPVYMEKIAVGPGVPEGCLSLDADPAENI RALAKVRGVPAEALLICVLDRPRNEALVDRVRSTGARITLISDGDVSGAVAVGLPETGVDMYMGSGGAAEGVLAAAGLRC LGGVLQGRLMVRGDSEKAAVRAAGITDPDRILTMADMVPGETMFAATGVTDGALLRGVRLHAGSARSSTLVMRSRTGTLR FIDTRHDLSKLSADR >Mature_334_residues SSVASFSADPVLSAALDRNLALDVARVTEAAAIAAARYMGRGDERAADLAATAAMREALTTVPMAGTITLGALADPDDGL FRLGEGVGNGTGLLIDVGVTPLEGATICAMGAPNATACMALARKGELLAVPPVYMEKIAVGPGVPEGCLSLDADPAENIR ALAKVRGVPAEALLICVLDRPRNEALVDRVRSTGARITLISDGDVSGAVAVGLPETGVDMYMGSGGAAEGVLAAAGLRCL GGVLQGRLMVRGDSEKAAVRAAGITDPDRILTMADMVPGETMFAATGVTDGALLRGVRLHAGSARSSTLVMRSRTGTLRF IDTRHDLSKLSADR
Specific function: Catalyzes the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate. Can functionally substitute for the FBPase class 3 (Fbp) of B.subtilis [H]
COG id: COG1494
COG function: function code G; Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790360, Length=326, Percent_Identity=38.0368098159509, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1789298, Length=321, Percent_Identity=33.9563862928349, Blast_Score=165, Evalue=5e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004464 [H]
Pfam domain/function: PF03320 FBPase_glpX [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 34106; Mature: 33975
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVASFSADPVLSAALDRNLALDVARVTEAAAIAAARYMGRGDERAADLAATAAMREAL CCCCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TTVPMAGTITLGALADPDDGLFRLGEGVGNGTGLLIDVGVTPLEGATICAMGAPNATACM HHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHH ALARKGELLAVPPVYMEKIAVGPGVPEGCLSLDADPAENIRALAKVRGVPAEALLICVLD HHHCCCCEEEECHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHEEEEEEEC RPRNEALVDRVRSTGARITLISDGDVSGAVAVGLPETGVDMYMGSGGAAEGVLAAAGLRC CCCCHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHH LGGVLQGRLMVRGDSEKAAVRAAGITDPDRILTMADMVPGETMFAATGVTDGALLRGVRL HHHHHCCEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHEEEE HAGSARSSTLVMRSRTGTLRFIDTRHDLSKLSADR ECCCCCCCEEEEEECCCEEEEEECHHHHHHHCCCC >Mature Secondary Structure SSVASFSADPVLSAALDRNLALDVARVTEAAAIAAARYMGRGDERAADLAATAAMREAL CCCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TTVPMAGTITLGALADPDDGLFRLGEGVGNGTGLLIDVGVTPLEGATICAMGAPNATACM HHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHH ALARKGELLAVPPVYMEKIAVGPGVPEGCLSLDADPAENIRALAKVRGVPAEALLICVLD HHHCCCCEEEECHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHEEEEEEEC RPRNEALVDRVRSTGARITLISDGDVSGAVAVGLPETGVDMYMGSGGAAEGVLAAAGLRC CCCCHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHH LGGVLQGRLMVRGDSEKAAVRAAGITDPDRILTMADMVPGETMFAATGVTDGALLRGVRL HHHHHCCEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHEEEE HAGSARSSTLVMRSRTGTLRFIDTRHDLSKLSADR ECCCCCCCEEEEEECCCEEEEEECHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8423140; 9353933; 9384377 [H]