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The map label for this gene is recJ [H]

Identifier: 83593743

GI number: 83593743

Start: 2806942

End: 2808762

Strand: Reverse

Name: recJ [H]

Synonym: Rru_A2408

Alternate gene names: 83593743

Gene position: 2808762-2806942 (Counterclockwise)

Preceding gene: 83593744

Following gene: 83593736

Centisome position: 64.53

GC content: 69.19

Gene sequence:

>1821_bases
ATGACCGATATTCTGACTCCGGCGGCCCCGCCCGCCCTTCCGACCCGCGATGCCGCATTTCTCGGGGTCGAGCGTTCGCG
CGGCGGCCGGCGATGGGTCTTGCGCCCGGGCGATGAGCGACAGGCCTTGGCGATCAGCCAGCGCCTGGGGGTTCCCGAGG
TTGTTGGTCGGGTTCTGACCGGTCGCGGCGTCCAGGTCGAGGAGGCCGACGGTTTTCTCACGCCGACGTTGCGCGCCCTG
CTGCCCGATCCCGGCCATCTGCTGGATATGGACAAGGCGGTGGCCCGCCTGAGCAAGGCGGTGCGCGACAAGGAGACGAT
CGCCATCTTCGGCGATTACGACGTCGACGGGGCGACCTCGACGGCCCTGATGCACCGCTTCTTCCGCAGCCTGGGCGCCC
GGGTGCTGATCCATATTCCCGACCGGGTGCTTGAGGGCTATGGCCCCAATGCTCCGGCCCTGGAGGCCTTGGCCGCCAAG
GGGGCGCGGGTGGTTCTTACGGTCGATTGCGGCATCAGCGCCTTTGACGCCCTGCGCGCGGCCAAGGCGGCGGGGCTTGA
TGTCGTTGTTTGCGACCACCACGAGGCGCGCACCGAACTGCCCGCCGCCGTCGCCGTGGTCAATCCCAAGCGCCTTGATG
AGGCCAGCCCCCATACCCACCTCGCCGCCGTTGGCGTGGCCTTCCTGATGGCGGTGGCGATCAACCGCGATCTGCGCGAC
AGCGGCTGGTTCGCCGCCGAGCAGCGGCCGCCGCCCGATCTGATGGCCTTGCTCGATCTGGTGGCGCTTGGCACGGTTTG
CGACATGGTGCCGCTGATCGGCGTCAATCGCGCCCTGGTCCAACAGGGGCTGAAGGTGATCGCCAAGCGCACCAATCCCG
GCATCGCCGCCCTGGCCGAGGTGTCGGGCGTGCGCGACCGGGTCGACGCCTTTCATCTGGGATTCATGCTGGGGCCGCGG
GTCAATGCCGGCGGCCGGGTGGGGCAGGCCGGCATGGGCGCGGCCCTGTTGTCGAGCGAGGATCCGCTGGAATGCCTGGA
TTTCGCCCGCCAGCTTGACGCCTTCAATGGCGCGCGCAAGGAAATCGAGGCGGCGGTCCTGCATCAGGCGATCGAACAGG
TGGAAGCCGCCCCTGCCAATGATCTGCCGCTGGTTTTCGCCAGCGGCACCGATTGGCATCCCGGCGTCGTCGGCATCGTC
GCCAGCCGGCTCAAGGAACGCTATGGCTTGCCGGCCTGCGCCGTCGCCCTGGATGGCGGACTGGCCAAGGGGTCGGGCCG
CTCGGTCGGCGGCGTCGATCTTGGCCGGGTGGTGATCGCCGCCCGCGAGGCCGGCGTGCTTGAGGCCGGGGGCGGGCACG
CCATGGCCGCCGGTTTCAGCTTGCGCACCGATCGCCTGGAGGAGTTTCGCCAGTTCCTGGGCGAGCGGCTGAAGGATCAG
GTGGCGGCGCTCGCCCTGGTCGCCTCGCTCGATCTCGATGGGGTTCTCGATGTGCGCGGCGCCAATGCCCAATTGGTGCG
CGCCCTGTCGCAGGCCGGCCCCTATGGCTCGGGCAATCCCGAACCGCGCTTCGCCGTCGCCAATGCCCGCGTCGGCAAGG
TCGATGTCGTCGGCATGGGCCATGTCCGCTGTTTCCTCAACGGTCCCTCGGGGGGCTCGTTGAAGGCGATGGCTTTCAAG
GCCGCCGATTCCGAAATCGGCCACGCCCTGCTCACCGCCCATGGCGCCTCGCTGCATGTGGCGGGAACCCTGCGCCTCGA
TAGCTTCCAGGGGCGGGAGACCGTCGTCCTGGTGGTTGACGACGTCGCCCCCTGCTCCTGA

Upstream 100 bases:

>100_bases
TCAGGGCGGCGGGCGGGGACTAGGTTTCCCCCGCGCCGTTCTCACCCGGGGACGGGTCAGTCCGCTTGCCGGGGGATCGC
CGCCGGGGTAGTGTCGGCCC

Downstream 100 bases:

>100_bases
AAACGGGTTTTCTCTTTCTCAGCGGAAGGTCGGCGGACCCGAGGGCGAGGCCGGGCCTTCGTCGGCCGGCGGCTGGTCGG
ATCCGGCGCCCAGGGTGATC

Product: RecJ exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MTDILTPAAPPALPTRDAAFLGVERSRGGRRWVLRPGDERQALAISQRLGVPEVVGRVLTGRGVQVEEADGFLTPTLRAL
LPDPGHLLDMDKAVARLSKAVRDKETIAIFGDYDVDGATSTALMHRFFRSLGARVLIHIPDRVLEGYGPNAPALEALAAK
GARVVLTVDCGISAFDALRAAKAAGLDVVVCDHHEARTELPAAVAVVNPKRLDEASPHTHLAAVGVAFLMAVAINRDLRD
SGWFAAEQRPPPDLMALLDLVALGTVCDMVPLIGVNRALVQQGLKVIAKRTNPGIAALAEVSGVRDRVDAFHLGFMLGPR
VNAGGRVGQAGMGAALLSSEDPLECLDFARQLDAFNGARKEIEAAVLHQAIEQVEAAPANDLPLVFASGTDWHPGVVGIV
ASRLKERYGLPACAVALDGGLAKGSGRSVGGVDLGRVVIAAREAGVLEAGGGHAMAAGFSLRTDRLEEFRQFLGERLKDQ
VAALALVASLDLDGVLDVRGANAQLVRALSQAGPYGSGNPEPRFAVANARVGKVDVVGMGHVRCFLNGPSGGSLKAMAFK
AADSEIGHALLTAHGASLHVAGTLRLDSFQGRETVVLVVDDVAPCS

Sequences:

>Translated_606_residues
MTDILTPAAPPALPTRDAAFLGVERSRGGRRWVLRPGDERQALAISQRLGVPEVVGRVLTGRGVQVEEADGFLTPTLRAL
LPDPGHLLDMDKAVARLSKAVRDKETIAIFGDYDVDGATSTALMHRFFRSLGARVLIHIPDRVLEGYGPNAPALEALAAK
GARVVLTVDCGISAFDALRAAKAAGLDVVVCDHHEARTELPAAVAVVNPKRLDEASPHTHLAAVGVAFLMAVAINRDLRD
SGWFAAEQRPPPDLMALLDLVALGTVCDMVPLIGVNRALVQQGLKVIAKRTNPGIAALAEVSGVRDRVDAFHLGFMLGPR
VNAGGRVGQAGMGAALLSSEDPLECLDFARQLDAFNGARKEIEAAVLHQAIEQVEAAPANDLPLVFASGTDWHPGVVGIV
ASRLKERYGLPACAVALDGGLAKGSGRSVGGVDLGRVVIAAREAGVLEAGGGHAMAAGFSLRTDRLEEFRQFLGERLKDQ
VAALALVASLDLDGVLDVRGANAQLVRALSQAGPYGSGNPEPRFAVANARVGKVDVVGMGHVRCFLNGPSGGSLKAMAFK
AADSEIGHALLTAHGASLHVAGTLRLDSFQGRETVVLVVDDVAPCS
>Mature_605_residues
TDILTPAAPPALPTRDAAFLGVERSRGGRRWVLRPGDERQALAISQRLGVPEVVGRVLTGRGVQVEEADGFLTPTLRALL
PDPGHLLDMDKAVARLSKAVRDKETIAIFGDYDVDGATSTALMHRFFRSLGARVLIHIPDRVLEGYGPNAPALEALAAKG
ARVVLTVDCGISAFDALRAAKAAGLDVVVCDHHEARTELPAAVAVVNPKRLDEASPHTHLAAVGVAFLMAVAINRDLRDS
GWFAAEQRPPPDLMALLDLVALGTVCDMVPLIGVNRALVQQGLKVIAKRTNPGIAALAEVSGVRDRVDAFHLGFMLGPRV
NAGGRVGQAGMGAALLSSEDPLECLDFARQLDAFNGARKEIEAAVLHQAIEQVEAAPANDLPLVFASGTDWHPGVVGIVA
SRLKERYGLPACAVALDGGLAKGSGRSVGGVDLGRVVIAAREAGVLEAGGGHAMAAGFSLRTDRLEEFRQFLGERLKDQV
AALALVASLDLDGVLDVRGANAQLVRALSQAGPYGSGNPEPRFAVANARVGKVDVVGMGHVRCFLNGPSGGSLKAMAFKA
ADSEIGHALLTAHGASLHVAGTLRLDSFQGRETVVLVVDDVAPCS

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=567, Percent_Identity=37.2134038800705, Blast_Score=299, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63341; Mature: 63209

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDILTPAAPPALPTRDAAFLGVERSRGGRRWVLRPGDERQALAISQRLGVPEVVGRVLT
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHC
GRGVQVEEADGFLTPTLRALLPDPGHLLDMDKAVARLSKAVRDKETIAIFGDYDVDGATS
CCCCEEECCCCCCCHHHHHHCCCCCCEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
TALMHRFFRSLGARVLIHIPDRVLEGYGPNAPALEALAAKGARVVLTVDCGISAFDALRA
HHHHHHHHHHCCCEEEEECCHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHH
AKAAGLDVVVCDHHEARTELPAAVAVVNPKRLDEASPHTHLAAVGVAFLMAVAINRDLRD
HHHCCCEEEEECCCHHHHCCCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
SGWFAAEQRPPPDLMALLDLVALGTVCDMVPLIGVNRALVQQGLKVIAKRTNPGIAALAE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHH
VSGVRDRVDAFHLGFMLGPRVNAGGRVGQAGMGAALLSSEDPLECLDFARQLDAFNGARK
HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHH
EIEAAVLHQAIEQVEAAPANDLPLVFASGTDWHPGVVGIVASRLKERYGLPACAVALDGG
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
LAKGSGRSVGGVDLGRVVIAAREAGVLEAGGGHAMAAGFSLRTDRLEEFRQFLGERLKDQ
CCCCCCCCCCCCCHHHEEEEECCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
VAALALVASLDLDGVLDVRGANAQLVRALSQAGPYGSGNPEPRFAVANARVGKVDVVGMG
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECC
HVRCFLNGPSGGSLKAMAFKAADSEIGHALLTAHGASLHVAGTLRLDSFQGRETVVLVVD
EEEEEEECCCCCCEEEEEEECCCHHHCHHHEEECCCEEEEEEEEEEECCCCCCEEEEEEE
DVAPCS
CCCCCC
>Mature Secondary Structure 
TDILTPAAPPALPTRDAAFLGVERSRGGRRWVLRPGDERQALAISQRLGVPEVVGRVLT
CCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHC
GRGVQVEEADGFLTPTLRALLPDPGHLLDMDKAVARLSKAVRDKETIAIFGDYDVDGATS
CCCCEEECCCCCCCHHHHHHCCCCCCEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
TALMHRFFRSLGARVLIHIPDRVLEGYGPNAPALEALAAKGARVVLTVDCGISAFDALRA
HHHHHHHHHHCCCEEEEECCHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHH
AKAAGLDVVVCDHHEARTELPAAVAVVNPKRLDEASPHTHLAAVGVAFLMAVAINRDLRD
HHHCCCEEEEECCCHHHHCCCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
SGWFAAEQRPPPDLMALLDLVALGTVCDMVPLIGVNRALVQQGLKVIAKRTNPGIAALAE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHH
VSGVRDRVDAFHLGFMLGPRVNAGGRVGQAGMGAALLSSEDPLECLDFARQLDAFNGARK
HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHH
EIEAAVLHQAIEQVEAAPANDLPLVFASGTDWHPGVVGIVASRLKERYGLPACAVALDGG
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
LAKGSGRSVGGVDLGRVVIAAREAGVLEAGGGHAMAAGFSLRTDRLEEFRQFLGERLKDQ
CCCCCCCCCCCCCHHHEEEEECCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
VAALALVASLDLDGVLDVRGANAQLVRALSQAGPYGSGNPEPRFAVANARVGKVDVVGMG
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECC
HVRCFLNGPSGGSLKAMAFKAADSEIGHALLTAHGASLHVAGTLRLDSFQGRETVVLVVD
EEEEEEECCCCCCEEEEEEECCCHHHCHHHEEECCCEEEEEEEEEEECCCCCCEEEEEEE
DVAPCS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]