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The map label for this gene is yiaM [C]

Identifier: 83593573

GI number: 83593573

Start: 2598982

End: 2599485

Strand: Reverse

Name: yiaM [C]

Synonym: Rru_A2238

Alternate gene names: 83593573

Gene position: 2599485-2598982 (Counterclockwise)

Preceding gene: 83593574

Following gene: 83593572

Centisome position: 59.72

GC content: 63.69

Gene sequence:

>504_bases
ATGTCCTCCCCCTCGACCGAATCCGCCGCCAAAGATGAGGCCTTGAGCGTTCCGATCTCTGTGGAACGCGTGCTGGCCGC
CCTGGCGATGGCGGCGATCTGCCTTATCACCTTCGCCAATGTCGTCGTGCGCTATTTCACCGATGTCTCGCTGGCCTTCA
CCGAGGAATTTTCGATTTTCCTGATGGTGGTGATGACCCTGCTTGGCTCCTCGGCGGCGATCGCCCTGGACCGCCACATC
CGCATCACCGTTCTCGTCGATCGTCTGCCCGCGCCGCTGCGGCGGGTGACGGAAACGCTGGTGTGGCTGGCGACCCTGGC
GATGCTGGGGGTGCTGGTCTGGTACGGGGGGCGCCTCACCTATGATCAATGGCGCTTCGAGGAAACCTCGCCGGCGCTCG
GCTATCCCCAATGGCTTTATACGCTGTGGTTGCCGCTGCTGAGCGCGGTGATGGGGCTGCGGGTTCTTGGTCGGTTGAGC
CGTTTGGCCCGGGGGACGCGATAA

Upstream 100 bases:

>100_bases
GTGAAAGAGGCCGAAACGGCCATCGCCGCCGGTCGTTGACCCTTCCGGGGGCGCCAGGCGCGCTAGGCGCCCCCCTGTCC
TTGCCAGCAAGAAGACCGCC

Downstream 100 bases:

>100_bases
TGGCTACCCTGTCGCTGTTTGCCGTGTTCCTGGGCTTGACGCTTCTTGGCGCGCCGCTGGCCGTCGCCCTGGGCCTTGCC
GGATCGGTGGCGATCCTCGA

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Protein; TRAP Transporter Subunit DctQ; TRAP Transporter Small Transmembrane Protein; Integral Membrane Protein; Tripartite ATP-Independent Periplasmic; DctQ1 Protein; TRAP Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSSPSTESAAKDEALSVPISVERVLAALAMAAICLITFANVVVRYFTDVSLAFTEEFSIFLMVVMTLLGSSAAIALDRHI
RITVLVDRLPAPLRRVTETLVWLATLAMLGVLVWYGGRLTYDQWRFEETSPALGYPQWLYTLWLPLLSAVMGLRVLGRLS
RLARGTR

Sequences:

>Translated_167_residues
MSSPSTESAAKDEALSVPISVERVLAALAMAAICLITFANVVVRYFTDVSLAFTEEFSIFLMVVMTLLGSSAAIALDRHI
RITVLVDRLPAPLRRVTETLVWLATLAMLGVLVWYGGRLTYDQWRFEETSPALGYPQWLYTLWLPLLSAVMGLRVLGRLS
RLARGTR
>Mature_166_residues
SSPSTESAAKDEALSVPISVERVLAALAMAAICLITFANVVVRYFTDVSLAFTEEFSIFLMVVMTLLGSSAAIALDRHIR
ITVLVDRLPAPLRRVTETLVWLATLAMLGVLVWYGGRLTYDQWRFEETSPALGYPQWLYTLWLPLLSAVMGLRVLGRLSR
LARGTR

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18548; Mature: 18417

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPSTESAAKDEALSVPISVERVLAALAMAAICLITFANVVVRYFTDVSLAFTEEFSIF
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMVVMTLLGSSAAIALDRHIRITVLVDRLPAPLRRVTETLVWLATLAMLGVLVWYGGRLT
HHHHHHHHCCCHHEEHHCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YDQWRFEETSPALGYPQWLYTLWLPLLSAVMGLRVLGRLSRLARGTR
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSPSTESAAKDEALSVPISVERVLAALAMAAICLITFANVVVRYFTDVSLAFTEEFSIF
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMVVMTLLGSSAAIALDRHIRITVLVDRLPAPLRRVTETLVWLATLAMLGVLVWYGGRLT
HHHHHHHHCCCHHEEHHCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YDQWRFEETSPALGYPQWLYTLWLPLLSAVMGLRVLGRLSRLARGTR
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA