| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593456
Identifier: 83593456
GI number: 83593456
Start: 2462962
End: 2464158
Strand: Direct
Name: 83593456
Synonym: Rru_A2121
Alternate gene names: NA
Gene position: 2462962-2464158 (Clockwise)
Preceding gene: 83593455
Following gene: 83593462
Centisome position: 56.58
GC content: 67.75
Gene sequence:
>1197_bases ATGCGCGTTGTCTATCTGGGCACCTATGACCACGACAAGCCGCGCAACCGCCTGATGATCGCGGCCCTGCGCGCCGCCGG CGTCGAGGTGCGCGAGTGTTGCGTCGATGTCTGGGCCGGCGTGGCCGACAAAAGCCTGATCGGCGGCTGGGCCCGCGTAA CCCGGCTTTTGCGCTGGTTGGCGGCCTATCCGCTGCTGATCGTCCGCTATCTGCGCTGTCCGCCCCATGACGCCGTGGTT TTTGGCTATCTCGGCCATCTCGATGTGCTGATTCTCGGCCCCTTCGCCCGCCTGCGCCGGGTCGCCGTTGTTTGGGACGT CTTTCTTTCCCTTCCCGATACGGTGGTTGGCGACCGCAAGATGATCTCGCCGCGCCATCCGCTGGCCCATCTCTTACGCT GGGGCGAAGGCTTGGCCTGCCGCCGCGTCGATCTGGCGCTGATGGATACCCGCGCCCAATCGCGGCTGCTGGAAGACGCC TATGGCCTGCCGCTGGCGCGCTCGGGCCATGTTTTCGTCGGCGCGGAACTCGATCGCTTCCCCTATCTGCCGCCCCGCCC GCCCCCCGGCCCCGGCCAGCCGCTTACCGTGTTGTTCTACGGCCAGTTCATCGCCTTGCATGGCATTGAAACCATCCTGC GCGCCGCCGCCCTTGATCGCGAGCGGCGGGTGGCGTGGCGGCTGATCGGCAGCGGCCAGGAAGCCGGCAAAATCCAGGCG ATGATGGAGGTCACCCCCGGTCTGGCCATTCACTGGCAGCGGTGGGTCGATTACGAGCGGTTGATCGAGGCGGTGGCGGC GGCCGATGTCTGCCTGGGGATCTTCGGCGGCTCGGATAAGGCGGGGCGGGTCATCGCCAATAAGGTGTTCCAGATCGCCG CGACCGGCCGGCCTTTGGTGACCCGCCAATCGCCGGCGATCGGCGAATTATTCGAGCCGGGACTGGCCGGTATCCGCCTA ATCCCCCCCGAAGACCCCGCCGCCCTGCTCCAAGCCGTTCTCGAGCTTGGCCACAGCGGGGAAAGCCTTCCCCAGGATCT GCGCGAGCGCTTCTCGCCCGCCGCCCTGGGCGCCCGCCTAAGCGCCCTGATCGCCCGCACACTCGCGGCGAAGGCGGATC CGCCGCGCCAGCAGCGACCCGATGACGAAGCCCATCCCATCGCCGAGGACGGTGACAAGGCGCAGCAGAAGCGATAG
Upstream 100 bases:
>100_bases CCTTGATCACCTGCGCACCCCCCCTTCCCTTCAGCGCAAATCGGCCTGAGGCGAGGGATTTGTCATAGCGTGGGATCAGG GCGGGGGGAGCGGGTTGAAC
Downstream 100 bases:
>100_bases GGCGACCGCCGGACCGGGCCCAAGCAGCGGGGCGAAACCGGCGACCAGCAGGGCCTCGCGCACCCCCAACCCGCCCGGCG CCCCGGGAAGGAGGAAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MRVVYLGTYDHDKPRNRLMIAALRAAGVEVRECCVDVWAGVADKSLIGGWARVTRLLRWLAAYPLLIVRYLRCPPHDAVV FGYLGHLDVLILGPFARLRRVAVVWDVFLSLPDTVVGDRKMISPRHPLAHLLRWGEGLACRRVDLALMDTRAQSRLLEDA YGLPLARSGHVFVGAELDRFPYLPPRPPPGPGQPLTVLFYGQFIALHGIETILRAAALDRERRVAWRLIGSGQEAGKIQA MMEVTPGLAIHWQRWVDYERLIEAVAAADVCLGIFGGSDKAGRVIANKVFQIAATGRPLVTRQSPAIGELFEPGLAGIRL IPPEDPAALLQAVLELGHSGESLPQDLRERFSPAALGARLSALIARTLAAKADPPRQQRPDDEAHPIAEDGDKAQQKR
Sequences:
>Translated_398_residues MRVVYLGTYDHDKPRNRLMIAALRAAGVEVRECCVDVWAGVADKSLIGGWARVTRLLRWLAAYPLLIVRYLRCPPHDAVV FGYLGHLDVLILGPFARLRRVAVVWDVFLSLPDTVVGDRKMISPRHPLAHLLRWGEGLACRRVDLALMDTRAQSRLLEDA YGLPLARSGHVFVGAELDRFPYLPPRPPPGPGQPLTVLFYGQFIALHGIETILRAAALDRERRVAWRLIGSGQEAGKIQA MMEVTPGLAIHWQRWVDYERLIEAVAAADVCLGIFGGSDKAGRVIANKVFQIAATGRPLVTRQSPAIGELFEPGLAGIRL IPPEDPAALLQAVLELGHSGESLPQDLRERFSPAALGARLSALIARTLAAKADPPRQQRPDDEAHPIAEDGDKAQQKR >Mature_398_residues MRVVYLGTYDHDKPRNRLMIAALRAAGVEVRECCVDVWAGVADKSLIGGWARVTRLLRWLAAYPLLIVRYLRCPPHDAVV FGYLGHLDVLILGPFARLRRVAVVWDVFLSLPDTVVGDRKMISPRHPLAHLLRWGEGLACRRVDLALMDTRAQSRLLEDA YGLPLARSGHVFVGAELDRFPYLPPRPPPGPGQPLTVLFYGQFIALHGIETILRAAALDRERRVAWRLIGSGQEAGKIQA MMEVTPGLAIHWQRWVDYERLIEAVAAADVCLGIFGGSDKAGRVIANKVFQIAATGRPLVTRQSPAIGELFEPGLAGIRL IPPEDPAALLQAVLELGHSGESLPQDLRERFSPAALGARLSALIARTLAAKADPPRQQRPDDEAHPIAEDGDKAQQKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43820; Mature: 43820
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVYLGTYDHDKPRNRLMIAALRAAGVEVRECCVDVWAGVADKSLIGGWARVTRLLRWL CEEEEEECCCCCCCHHHEEHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AAYPLLIVRYLRCPPHDAVVFGYLGHLDVLILGPFARLRRVAVVWDVFLSLPDTVVGDRK HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCHHCCCCC MISPRHPLAHLLRWGEGLACRRVDLALMDTRAQSRLLEDAYGLPLARSGHVFVGAELDRF CCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC PYLPPRPPPGPGQPLTVLFYGQFIALHGIETILRAAALDRERRVAWRLIGSGQEAGKIQA CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHEECCCCCCHHHHH MMEVTPGLAIHWQRWVDYERLIEAVAAADVCLGIFGGSDKAGRVIANKVFQIAATGRPLV HHHHCCCCEEHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCE TRQSPAIGELFEPGLAGIRLIPPEDPAALLQAVLELGHSGESLPQDLRERFSPAALGARL ECCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHH SALIARTLAAKADPPRQQRPDDEAHPIAEDGDKAQQKR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MRVVYLGTYDHDKPRNRLMIAALRAAGVEVRECCVDVWAGVADKSLIGGWARVTRLLRWL CEEEEEECCCCCCCHHHEEHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AAYPLLIVRYLRCPPHDAVVFGYLGHLDVLILGPFARLRRVAVVWDVFLSLPDTVVGDRK HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCHHCCCCC MISPRHPLAHLLRWGEGLACRRVDLALMDTRAQSRLLEDAYGLPLARSGHVFVGAELDRF CCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC PYLPPRPPPGPGQPLTVLFYGQFIALHGIETILRAAALDRERRVAWRLIGSGQEAGKIQA CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHEECCCCCCHHHHH MMEVTPGLAIHWQRWVDYERLIEAVAAADVCLGIFGGSDKAGRVIANKVFQIAATGRPLV HHHHCCCCEEHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCE TRQSPAIGELFEPGLAGIRLIPPEDPAALLQAVLELGHSGESLPQDLRERFSPAALGARL ECCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHH SALIARTLAAKADPPRQQRPDDEAHPIAEDGDKAQQKR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA