| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is eryA [H]
Identifier: 83593455
GI number: 83593455
Start: 2461858
End: 2462910
Strand: Direct
Name: eryA [H]
Synonym: Rru_A2120
Alternate gene names: 83593455
Gene position: 2461858-2462910 (Clockwise)
Preceding gene: 83593448
Following gene: 83593456
Centisome position: 56.56
GC content: 68.28
Gene sequence:
>1053_bases ATGAACCACTCCATGGCAAACAGACTGCCCGATATCGGGCAGTCTGTCGACAGGGCGACCGTCGGACTGGTCTTCGCCGG CAATGGCAGCCAGTGGCCGGGGATGGGCGCGGCCCTGTTGCGCGACGATGCGGTTTTTCGCGAAAGCGTCAGCGCCCTTG ACGCCAAGATCCGTGAGCGGGCCGGCTGGTCGGTGATCGACGCCCTGGACGCGGACACCTCGGCCCTGACCATCGCCCGC ATCGGCACCGCCCAGCCGCTGCTCTATGCCCTGCAGATCGGCCTTGTCGATAGCCTGCGGGCCCGGGGGCTGGCCTTTGG CGCGGTTTGCGGCCATTCGGTGGGCGAGGTCGCCGCCGCCACCGTCGTCGGCGCGCTGGACCCCGATCAGGCCCTTGATC TTATCCTCACCCGCAGCGCCGCCCAGGAACGCACCTGGGGCCAGGGAAAGATGGCCGCCCTCGCCCTCTCGGCGATCGAA GCCGAAGCGCTCTGCGCCCCATACGATGGCGCCGTCGTCGTCGCCGCCCTCAACAGTCCGACCTCGGTGACGCTTTCGGG CGATGAGGCCTGCCTGATCGCTCTTGGCGAACAGGCCAAGGCCGCCGGCGCGCTGTTTCGCCTACTTGATCTTGATTACG CCTTCCACAACCGCGTGCTTGATCCGGTGCGCGACGATCTGCTCAAGGCCCTGGCCCCCTTGCGCCCCCGCCCCTGCGCC CCCGGCTATCGGTTTTTCTCCTCGGTCGATGGCAAGGCCCGCGGCGGAGAGACCCTTGATGCCCGCTATTGGTGGGATAA CGTGCGCGAACCGGTGCGCTTCGATGCCGCCGTCACGGCGATGGCGGCCGGCGGCGTCACCACCTTCATCGAAATCGGTC CCCATCCGATCTTGCGCTCCTATCTGCGCGAGATCCTTCAAGGCCGCTCCCGCCTCGGCCGGGGTCCCCATCCCATCGCC ACCCTCAGCCGCACGCGCTCGGGGCCCGAAGCCCTGCAGGCCACCCTTGATCACCTGCGCACCCCCCCTTCCCTTCAGCG CAAATCGGCCTGA
Upstream 100 bases:
>100_bases GAGCATCGGGGCTTTACAAGCCCTGTTGCCGCGCTGATATCAGAAAGCAAAGGCCTAAAAAAAGGCCGGGATCAAGCATG ACAAGGCGGGATAGGCGGAC
Downstream 100 bases:
>100_bases GGCGAGGGATTTGTCATAGCGTGGGATCAGGGCGGGGGGAGCGGGTTGAACATGCGCGTTGTCTATCTGGGCACCTATGA CCACGACAAGCCGCGCAACC
Product: acyl transferase region
Products: NA
Alternate protein names: 6-deoxyerythronolide B synthase II; DEBS 2; ORF 2 [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MNHSMANRLPDIGQSVDRATVGLVFAGNGSQWPGMGAALLRDDAVFRESVSALDAKIRERAGWSVIDALDADTSALTIAR IGTAQPLLYALQIGLVDSLRARGLAFGAVCGHSVGEVAAATVVGALDPDQALDLILTRSAAQERTWGQGKMAALALSAIE AEALCAPYDGAVVVAALNSPTSVTLSGDEACLIALGEQAKAAGALFRLLDLDYAFHNRVLDPVRDDLLKALAPLRPRPCA PGYRFFSSVDGKARGGETLDARYWWDNVREPVRFDAAVTAMAAGGVTTFIEIGPHPILRSYLREILQGRSRLGRGPHPIA TLSRTRSGPEALQATLDHLRTPPSLQRKSA
Sequences:
>Translated_350_residues MNHSMANRLPDIGQSVDRATVGLVFAGNGSQWPGMGAALLRDDAVFRESVSALDAKIRERAGWSVIDALDADTSALTIAR IGTAQPLLYALQIGLVDSLRARGLAFGAVCGHSVGEVAAATVVGALDPDQALDLILTRSAAQERTWGQGKMAALALSAIE AEALCAPYDGAVVVAALNSPTSVTLSGDEACLIALGEQAKAAGALFRLLDLDYAFHNRVLDPVRDDLLKALAPLRPRPCA PGYRFFSSVDGKARGGETLDARYWWDNVREPVRFDAAVTAMAAGGVTTFIEIGPHPILRSYLREILQGRSRLGRGPHPIA TLSRTRSGPEALQATLDHLRTPPSLQRKSA >Mature_350_residues MNHSMANRLPDIGQSVDRATVGLVFAGNGSQWPGMGAALLRDDAVFRESVSALDAKIRERAGWSVIDALDADTSALTIAR IGTAQPLLYALQIGLVDSLRARGLAFGAVCGHSVGEVAAATVVGALDPDQALDLILTRSAAQERTWGQGKMAALALSAIE AEALCAPYDGAVVVAALNSPTSVTLSGDEACLIALGEQAKAAGALFRLLDLDYAFHNRVLDPVRDDLLKALAPLRPRPCA PGYRFFSSVDGKARGGETLDARYWWDNVREPVRFDAAVTAMAAGGVTTFIEIGPHPILRSYLREILQGRSRLGRGPHPIA TLSRTRSGPEALQATLDHLRTPPSLQRKSA
Specific function: Fatty acid biosynthesis. [C]
COG id: COG3321
COG function: function code Q; Polyketide synthase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI41872631, Length=291, Percent_Identity=30.9278350515464, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI212642053, Length=291, Percent_Identity=27.8350515463918, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17550940, Length=297, Percent_Identity=25.2525252525253, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI221330659, Length=296, Percent_Identity=27.7027027027027, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI19920632, Length=296, Percent_Identity=27.7027027027027, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24581345, Length=298, Percent_Identity=28.8590604026846, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR002198 - InterPro: IPR015357 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR020806 - InterPro: IPR015083 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00106 adh_short; PF00107 ADH_zinc_N; PF08990 Docking; PF09277 Erythro-docking; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF00550 PP-binding [H]
EC number: =2.3.1.94 [H]
Molecular weight: Translated: 37093; Mature: 37093
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHSMANRLPDIGQSVDRATVGLVFAGNGSQWPGMGAALLRDDAVFRESVSALDAKIRER CCCCHHHCCCHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AGWSVIDALDADTSALTIARIGTAQPLLYALQIGLVDSLRARGLAFGAVCGHSVGEVAAA CCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEHHHHHCCCHHHHHHH TVVGALDPDQALDLILTRSAAQERTWGQGKMAALALSAIEAEALCAPYDGAVVVAALNSP HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC TSVTLSGDEACLIALGEQAKAAGALFRLLDLDYAFHNRVLDPVRDDLLKALAPLRPRPCA CEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PGYRFFSSVDGKARGGETLDARYWWDNVREPVRFDAAVTAMAAGGVTTFIEIGPHPILRS CHHHHHHCCCCCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHH YLREILQGRSRLGRGPHPIATLSRTRSGPEALQATLDHLRTPPSLQRKSA HHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure MNHSMANRLPDIGQSVDRATVGLVFAGNGSQWPGMGAALLRDDAVFRESVSALDAKIRER CCCCHHHCCCHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AGWSVIDALDADTSALTIARIGTAQPLLYALQIGLVDSLRARGLAFGAVCGHSVGEVAAA CCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEHHHHHCCCHHHHHHH TVVGALDPDQALDLILTRSAAQERTWGQGKMAALALSAIEAEALCAPYDGAVVVAALNSP HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC TSVTLSGDEACLIALGEQAKAAGALFRLLDLDYAFHNRVLDPVRDDLLKALAPLRPRPCA CEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PGYRFFSSVDGKARGGETLDARYWWDNVREPVRFDAAVTAMAAGGVTTFIEIGPHPILRS CHHHHHHCCCCCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHH YLREILQGRSRLGRGPHPIATLSRTRSGPEALQATLDHLRTPPSLQRKSA HHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2024119; 1740151 [H]