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The map label for this gene is dadA [H]

Identifier: 83593399

GI number: 83593399

Start: 2387340

End: 2388608

Strand: Direct

Name: dadA [H]

Synonym: Rru_A2064

Alternate gene names: 83593399

Gene position: 2387340-2388608 (Clockwise)

Preceding gene: 83593398

Following gene: 83593400

Centisome position: 54.85

GC content: 72.18

Gene sequence:

>1269_bases
ATGCCCTCGCCCGCCGATGCCGCCCCCCCTCTTCCCACCCTGGTCGTTGGCGCCGGGATCATCGGCGTGTGCTGCGCCCT
CGCCCTGCAAGAGCGCGGGCTGTCCGTCACCCTGATCGATGCCAAGGAACCGGGCCAAGAAGCCAGCTTCGGCAATGCCG
GTTGTTTGGCGGCCAGCGAGATCTTGCCGATGGCGGCGCCCGGGCTGGCCTGGAAGGTGCCGCGTTGGCTGCTCGACCCC
TTGGGCCCCCTGGCCCTGCGCCCTGGCCATCTGCCGGCCCTGATCCCCTGGTTGCTGCGCTTCCTGCGCGCCGGCACGCC
GCAAGGGGTGATCGCCGCCACCGCCGCCTTGGCGCCGCTGGCCGATCTCAGCTGGCGGCTTTGGCCCGAGCTGGCGCGCG
CCCACGGCCTGGCAGGCGATATCCACGCGCAAGGCACCCTGACCCTTTATGAAACCGACGCGGCCTTCCAAGCCGATGCC
GCCGCCCGCCGGGTCCAGGCCGAGCATGGCATCGTCAGCGAGATCCTGACCCCGGGCGCCCTGGCCGAGCGCGAACCCGA
TCTGGCGCCGATTTTCCGCCACGGGGTATTCCATCCGCGCTACGCCCATGTCTCCGACCCGGCCCATATCACCGCCAAGC
TGGCCGAACGCGCCGTGGCTCGGGGGGCCGTGCTGGTGCGCGGCCGGGTTCTGGGCATCGAGCGCGGCGCGGGCCGCGCG
CGCCTGCGCCTTGAGGGCGGCGCCAGCCTGGAGGGCGCCCGGGTGGTGATCGCCGCCGGAGCATGGTCGGGGGCGCTTTG
CCGGGCCCTGGGCCATCGGGTGCTGCTGGAAAGCGAGCGCGGCTATAACACCACCTTGCCCGATCCGGGGGTGCGCATCG
GCTGCCCGATCAGTTCGGCCGAGGGCAAATTCATGCTCTCGCCCTTGGATATCGGCCTGCGCATCGGCGGTGCGGCCGAA
TTCGCCGGATTGACCGCCCCGGCCAATTACCGGCGCTGCGACGCGCTGTTGACCGTCGCCAAGCGCTTCCTGCCCGGGCT
GCGCGACGCCGGCGGCAGCCGGTGGATGGGCCAACGGCCGTCAACGCCCGACAGCCTGCCGGTGATCGACGCCCTGCCCG
GCGACGGCGCGGGCGTGTTGCTGGCCTTCGGCCATGGTCATCTTGGCCTGACCAATGCCCCGGGCACGGCGGCGATGATC
GCCGCCCTGGCCTGTGGCGAGACGGCGCCGATCGACGCCGGCGCCTTTTCCCTCTCCCGCTTCGCCTAA

Upstream 100 bases:

>100_bases
ATCGGGGAACGGCGACTTCCGCCGCCAGGACCCCACCAAAGCCCTGGACATTTTTGGATCCAATATACAAAATGGCTTTC
GTCCCTGGAGGCCAAAACCC

Downstream 100 bases:

>100_bases
GGACCCCATCCATGGCCCGTCATACTTTTTCGTGCATCGATGCCCATACCTGCGGCAATCCGGTGCGTCTGGTCTCGGGC
GGCGCGCCCCTGCTCACGGG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MPSPADAAPPLPTLVVGAGIIGVCCALALQERGLSVTLIDAKEPGQEASFGNAGCLAASEILPMAAPGLAWKVPRWLLDP
LGPLALRPGHLPALIPWLLRFLRAGTPQGVIAATAALAPLADLSWRLWPELARAHGLAGDIHAQGTLTLYETDAAFQADA
AARRVQAEHGIVSEILTPGALAEREPDLAPIFRHGVFHPRYAHVSDPAHITAKLAERAVARGAVLVRGRVLGIERGAGRA
RLRLEGGASLEGARVVIAAGAWSGALCRALGHRVLLESERGYNTTLPDPGVRIGCPISSAEGKFMLSPLDIGLRIGGAAE
FAGLTAPANYRRCDALLTVAKRFLPGLRDAGGSRWMGQRPSTPDSLPVIDALPGDGAGVLLAFGHGHLGLTNAPGTAAMI
AALACGETAPIDAGAFSLSRFA

Sequences:

>Translated_422_residues
MPSPADAAPPLPTLVVGAGIIGVCCALALQERGLSVTLIDAKEPGQEASFGNAGCLAASEILPMAAPGLAWKVPRWLLDP
LGPLALRPGHLPALIPWLLRFLRAGTPQGVIAATAALAPLADLSWRLWPELARAHGLAGDIHAQGTLTLYETDAAFQADA
AARRVQAEHGIVSEILTPGALAEREPDLAPIFRHGVFHPRYAHVSDPAHITAKLAERAVARGAVLVRGRVLGIERGAGRA
RLRLEGGASLEGARVVIAAGAWSGALCRALGHRVLLESERGYNTTLPDPGVRIGCPISSAEGKFMLSPLDIGLRIGGAAE
FAGLTAPANYRRCDALLTVAKRFLPGLRDAGGSRWMGQRPSTPDSLPVIDALPGDGAGVLLAFGHGHLGLTNAPGTAAMI
AALACGETAPIDAGAFSLSRFA
>Mature_421_residues
PSPADAAPPLPTLVVGAGIIGVCCALALQERGLSVTLIDAKEPGQEASFGNAGCLAASEILPMAAPGLAWKVPRWLLDPL
GPLALRPGHLPALIPWLLRFLRAGTPQGVIAATAALAPLADLSWRLWPELARAHGLAGDIHAQGTLTLYETDAAFQADAA
ARRVQAEHGIVSEILTPGALAEREPDLAPIFRHGVFHPRYAHVSDPAHITAKLAERAVARGAVLVRGRVLGIERGAGRAR
LRLEGGASLEGARVVIAAGAWSGALCRALGHRVLLESERGYNTTLPDPGVRIGCPISSAEGKFMLSPLDIGLRIGGAAEF
AGLTAPANYRRCDALLTVAKRFLPGLRDAGGSRWMGQRPSTPDSLPVIDALPGDGAGVLLAFGHGHLGLTNAPGTAAMIA
ALACGETAPIDAGAFSLSRFA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=421, Percent_Identity=26.1282660332542, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 43605; Mature: 43474

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPADAAPPLPTLVVGAGIIGVCCALALQERGLSVTLIDAKEPGQEASFGNAGCLAASE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHH
ILPMAAPGLAWKVPRWLLDPLGPLALRPGHLPALIPWLLRFLRAGTPQGVIAATAALAPL
HHHCCCCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ADLSWRLWPELARAHGLAGDIHAQGTLTLYETDAAFQADAAARRVQAEHGIVSEILTPGA
HHCCHHHHHHHHHHCCCCCCEECCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCCH
LAEREPDLAPIFRHGVFHPRYAHVSDPAHITAKLAERAVARGAVLVRGRVLGIERGAGRA
HHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCE
RLRLEGGASLEGARVVIAAGAWSGALCRALGHRVLLESERGYNTTLPDPGVRIGCPISSA
EEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCC
EGKFMLSPLDIGLRIGGAAEFAGLTAPANYRRCDALLTVAKRFLPGLRDAGGSRWMGQRP
CCEEEEEEECCCEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
STPDSLPVIDALPGDGAGVLLAFGHGHLGLTNAPGTAAMIAALACGETAPIDAGAFSLSR
CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
FA
CC
>Mature Secondary Structure 
PSPADAAPPLPTLVVGAGIIGVCCALALQERGLSVTLIDAKEPGQEASFGNAGCLAASE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHH
ILPMAAPGLAWKVPRWLLDPLGPLALRPGHLPALIPWLLRFLRAGTPQGVIAATAALAPL
HHHCCCCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ADLSWRLWPELARAHGLAGDIHAQGTLTLYETDAAFQADAAARRVQAEHGIVSEILTPGA
HHCCHHHHHHHHHHCCCCCCEECCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCCH
LAEREPDLAPIFRHGVFHPRYAHVSDPAHITAKLAERAVARGAVLVRGRVLGIERGAGRA
HHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCE
RLRLEGGASLEGARVVIAAGAWSGALCRALGHRVLLESERGYNTTLPDPGVRIGCPISSA
EEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCC
EGKFMLSPLDIGLRIGGAAEFAGLTAPANYRRCDALLTVAKRFLPGLRDAGGSRWMGQRP
CCEEEEEEECCCEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
STPDSLPVIDALPGDGAGVLLAFGHGHLGLTNAPGTAAMIAALACGETAPIDAGAFSLSR
CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
FA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA