| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593336
Identifier: 83593336
GI number: 83593336
Start: 2310554
End: 2311606
Strand: Reverse
Name: 83593336
Synonym: Rru_A2001
Alternate gene names: NA
Gene position: 2311606-2310554 (Counterclockwise)
Preceding gene: 83593338
Following gene: 83593334
Centisome position: 53.11
GC content: 63.53
Gene sequence:
>1053_bases ATGATGCGCCCGATGTTTTCCCTTCTAGGGGCCGCCGCACTGGGCTGCGCCGTGGTCGCCGCGCCCGCCAGCGCCGCCGA TCCGACCGAACAGATCGATCCCGATACCGGTACGCCGTCCTATTATCCCAAGTGGGATGACGGCACGCTGTCGATTCAGG TTGAAAACGACAAGTTCGGCTTTTCCGGGACCGACCAGCATTACACCAACGGCCTTCATGCCACCTGGTTGTCGGGGACC GGCGATATGCCGATCTGGGCCCAGGAAGTCGGCAACGCCTTGCCGTTCTTTCCGACCAATTCGATCAAGCGCTACAGCCT GAGCTTTGGTCAGAGCATTTTCACGCCGTCCGACACCCAGGCCGATGATCCCGATCCCGATGATCGCCCCTATGCGGGCT GGACCTATATCGGCCTGGGCTATCTGGCCGAAACCGGCAATACCCTTGACCGCCTGGAAATCGACTTGGGCGTGGTCGGT CCCTGGGCCCTGGGCGAAGAGACCCAGAACAACTTCCATAGCCTGATCGGCGTCGATACGGCCAAGGGCTGGGGCTCGCA ATTGCATAACGAGCCGGGCGCCGTGCTCTATTACGAACGCATGTGGCGGGCCTTGGGCAGCTTCAAGGCCGGTGGCCTGG GCTTCGACTTCTCGCCCCATGCCGGCGCCGCCCTGGGCAACGTTTATACCTATGCCGCCGGTGGCGGCACCGTGCGGGTC GGCTTCAACCTGCCCGATGATTACGGCCCGCCGCGCATCCGCCCCAGCCTTCCCGGCTCGACCCAGTTCGAACCGACCGG CGGTCTGGGCGGCTATCTGTTCGCCGGCGTCGAAGGCCGCGCCGTCGCCCGCAACATCTTCCTCGATGGCAACACCTTCC GCGACAGCCCCAGCGTCGACAAGAAGATCTTCGTGGGCGACGTTCAGGCCGGCGTGGCGGTGACCCTTGGCAATACCCGG GTGACCTATACCCAGGCCATCCGCTCGCCCGAATTCGACGGTCAGGACAAGCCCGATATCTTCGGATCGATCAGCCTGTC CTATCGCTTCTAG
Upstream 100 bases:
>100_bases AAAGAGCATCTTCTTGCCGTCATGCCGCCTTTTTGCGGTCTCCACCCCCGTTCCTCCCGTCACCCCCCAGACCTCTTCCA ATTTGTGGAGTTCGCGTCCG
Downstream 100 bases:
>100_bases AGCAGATCCCTTAGCATTCTGAAGCAGACTGCGACAGAGATTTGCTTAAATATCAGCATGTTAGAGCGGTATGCGCGGAC TTTGGTTTCACGCGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MMRPMFSLLGAAALGCAVVAAPASAADPTEQIDPDTGTPSYYPKWDDGTLSIQVENDKFGFSGTDQHYTNGLHATWLSGT GDMPIWAQEVGNALPFFPTNSIKRYSLSFGQSIFTPSDTQADDPDPDDRPYAGWTYIGLGYLAETGNTLDRLEIDLGVVG PWALGEETQNNFHSLIGVDTAKGWGSQLHNEPGAVLYYERMWRALGSFKAGGLGFDFSPHAGAALGNVYTYAAGGGTVRV GFNLPDDYGPPRIRPSLPGSTQFEPTGGLGGYLFAGVEGRAVARNIFLDGNTFRDSPSVDKKIFVGDVQAGVAVTLGNTR VTYTQAIRSPEFDGQDKPDIFGSISLSYRF
Sequences:
>Translated_350_residues MMRPMFSLLGAAALGCAVVAAPASAADPTEQIDPDTGTPSYYPKWDDGTLSIQVENDKFGFSGTDQHYTNGLHATWLSGT GDMPIWAQEVGNALPFFPTNSIKRYSLSFGQSIFTPSDTQADDPDPDDRPYAGWTYIGLGYLAETGNTLDRLEIDLGVVG PWALGEETQNNFHSLIGVDTAKGWGSQLHNEPGAVLYYERMWRALGSFKAGGLGFDFSPHAGAALGNVYTYAAGGGTVRV GFNLPDDYGPPRIRPSLPGSTQFEPTGGLGGYLFAGVEGRAVARNIFLDGNTFRDSPSVDKKIFVGDVQAGVAVTLGNTR VTYTQAIRSPEFDGQDKPDIFGSISLSYRF >Mature_350_residues MMRPMFSLLGAAALGCAVVAAPASAADPTEQIDPDTGTPSYYPKWDDGTLSIQVENDKFGFSGTDQHYTNGLHATWLSGT GDMPIWAQEVGNALPFFPTNSIKRYSLSFGQSIFTPSDTQADDPDPDDRPYAGWTYIGLGYLAETGNTLDRLEIDLGVVG PWALGEETQNNFHSLIGVDTAKGWGSQLHNEPGAVLYYERMWRALGSFKAGGLGFDFSPHAGAALGNVYTYAAGGGTVRV GFNLPDDYGPPRIRPSLPGSTQFEPTGGLGGYLFAGVEGRAVARNIFLDGNTFRDSPSVDKKIFVGDVQAGVAVTLGNTR VTYTQAIRSPEFDGQDKPDIFGSISLSYRF
Specific function: Unknown
COG id: COG3528
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37513; Mature: 37513
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPMFSLLGAAALGCAVVAAPASAADPTEQIDPDTGTPSYYPKWDDGTLSIQVENDKFG CCCHHHHHHHHHHHHHHEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC FSGTDQHYTNGLHATWLSGTGDMPIWAQEVGNALPFFPTNSIKRYSLSFGQSIFTPSDTQ CCCCCHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEEHHCCCEECCCCCCC ADDPDPDDRPYAGWTYIGLGYLAETGNTLDRLEIDLGVVGPWALGEETQNNFHSLIGVDT CCCCCCCCCCCCCEEEEEEEEHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHEECCC AKGWGSQLHNEPGAVLYYERMWRALGSFKAGGLGFDFSPHAGAALGNVYTYAAGGGTVRV CCCHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCEEEEECCCCEEEE GFNLPDDYGPPRIRPSLPGSTQFEPTGGLGGYLFAGVEGRAVARNIFLDGNTFRDSPSVD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCC KKIFVGDVQAGVAVTLGNTRVTYTQAIRSPEFDGQDKPDIFGSISLSYRF CEEEEEECCCCEEEEECCCEEEEEHHHCCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MMRPMFSLLGAAALGCAVVAAPASAADPTEQIDPDTGTPSYYPKWDDGTLSIQVENDKFG CCCHHHHHHHHHHHHHHEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC FSGTDQHYTNGLHATWLSGTGDMPIWAQEVGNALPFFPTNSIKRYSLSFGQSIFTPSDTQ CCCCCHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEEHHCCCEECCCCCCC ADDPDPDDRPYAGWTYIGLGYLAETGNTLDRLEIDLGVVGPWALGEETQNNFHSLIGVDT CCCCCCCCCCCCCEEEEEEEEHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHEECCC AKGWGSQLHNEPGAVLYYERMWRALGSFKAGGLGFDFSPHAGAALGNVYTYAAGGGTVRV CCCHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCEEEEECCCCEEEE GFNLPDDYGPPRIRPSLPGSTQFEPTGGLGGYLFAGVEGRAVARNIFLDGNTFRDSPSVD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCC KKIFVGDVQAGVAVTLGNTRVTYTQAIRSPEFDGQDKPDIFGSISLSYRF CEEEEEECCCCEEEEECCCEEEEEHHHCCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA