| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593334
Identifier: 83593334
GI number: 83593334
Start: 2309068
End: 2309382
Strand: Reverse
Name: 83593334
Synonym: Rru_A1999
Alternate gene names: NA
Gene position: 2309382-2309068 (Counterclockwise)
Preceding gene: 83593336
Following gene: 83593330
Centisome position: 53.05
GC content: 55.24
Gene sequence:
>315_bases GTGAGCGAAGAACGTATTACGCGACGCTCGCTGGCGTCGCCAAAAACCAAGGAGAGTGATTGGTCTCGCTTCGATGTCCT GACCGATGCCGACATCGAAGATGCGGTCACAGCCGATCTTGATGCGGCACCCCTTGCCGACGAGGCGTGGTTCGCGCAAG CGGCGATTGTCGAGCCTCCCCTTAAAGAAGCCGTAAGTATCCGCCTTGATAAAGACGTCCTGGCGTTTTTTAAAACCACC AGCACCCGCTATCAAACCCGTATCAACGCGGTTCTGAGGGCGTATATGGAAAGCGAGTTGAGGTCAAAACGCTGA
Upstream 100 bases:
>100_bases TTTATTGCTTTTGGAGAGGTGAACTCTCGGGTTATCGCGGTTGTTTACACGTGGCGTGGTACGGTATGTCGGATTATTTC AGCACGAAAGGCGCAAACAC
Downstream 100 bases:
>100_bases CCTTTTTCTAGCGTGGACCAAATCCCTTGGCGACCTTGACCAGAGTGGGACGAGGCTTCGCTTTATTCTCTACGGCGCCA ACCCGCAGCCTCGGCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSEERITRRSLASPKTKESDWSRFDVLTDADIEDAVTADLDAAPLADEAWFAQAAIVEPPLKEAVSIRLDKDVLAFFKTT STRYQTRINAVLRAYMESELRSKR
Sequences:
>Translated_104_residues MSEERITRRSLASPKTKESDWSRFDVLTDADIEDAVTADLDAAPLADEAWFAQAAIVEPPLKEAVSIRLDKDVLAFFKTT STRYQTRINAVLRAYMESELRSKR >Mature_103_residues SEERITRRSLASPKTKESDWSRFDVLTDADIEDAVTADLDAAPLADEAWFAQAAIVEPPLKEAVSIRLDKDVLAFFKTTS TRYQTRINAVLRAYMESELRSKR
Specific function: Unknown
COG id: COG3514
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11808; Mature: 11677
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEERITRRSLASPKTKESDWSRFDVLTDADIEDAVTADLDAAPLADEAWFAQAAIVEPP CCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCC LKEAVSIRLDKDVLAFFKTTSTRYQTRINAVLRAYMESELRSKR HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEERITRRSLASPKTKESDWSRFDVLTDADIEDAVTADLDAAPLADEAWFAQAAIVEPP CCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCC LKEAVSIRLDKDVLAFFKTTSTRYQTRINAVLRAYMESELRSKR HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA