| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is yetK [H]
Identifier: 83593208
GI number: 83593208
Start: 2170777
End: 2171700
Strand: Reverse
Name: yetK [H]
Synonym: Rru_A1873
Alternate gene names: 83593208
Gene position: 2171700-2170777 (Counterclockwise)
Preceding gene: 83593209
Following gene: 83593203
Centisome position: 49.89
GC content: 71.43
Gene sequence:
>924_bases ATGACCGCGCTCTCCTCCCCAGGCAACAGCCTTCGTCGTCCGTTCGGCCCCTCGGCCAGTTTGCTGATGGTCTGCGGCGC CTTTCTGCTGGTCGGCAGTTCGGTCGTGGCCTCGAAGGTGGTGACCGCGGCCTTTCCCCCCTTCACCGCCACCGCCGTGC GCTTCGCCATCGCCGTTGGCTTGTTGATCCCCTGGATGGTGCTCAGTCAGGGCTGGCCGGCCTGGCCCGGACGTCGGGCG GTCCTGGCGCTCGGCCTGCAGGCGCTGACCGGTTGCGTGTTGTTCTCGGTCTTGCTGCTCGAAGGGCTGCGGCGCAGCGG CGGGGTGGAGGCCGGCTTGACCCTGGGAACCCTGCCCGCCGTCGTCGCCCTGTTGGCGGTGCCCCTGCTCGGCGAGCGCC TTGACCGGCGGATCGGCGTGGCGGTGCTGCTGGCCGCCGGGGCCGGCGCCCTGCTCCATGGCGGAAAGGGGGCTGGCGGA AGCGGTTGGCTTGGGCCGGTTCTTCTTTTTGGCGCCGTGGTTTGCGAGGCGTTGTTTACCCTTCTTGGCAAGCGCGCCGT GGTTCACCTGTCGCCGGTGGTGACGGCAACGGCGGTCAGCTTCGCCTCGCTGGCGCTGTCGCTGGGGCCGGCCCTGACCG AGCAGCCGCTGGCGGCTTTGTCGAGCGCGCCGGCGGCGGCGTGGCTTGGCGCCTTGTGGTTGGGGGCGCCGGTCACCGTG GGCGGCTTCGTGTTGTTCCATGCCGGAGTGGCGGGAACCTCGGGCGGGGCGGCGGGGGTCGCCAGCGCCCTGGTGCCACT GTCGGCGGCGGGCTTATCGGCCCTGTTGCTGGGCGAGGCCTTGCTGCCGACCGATCTGATGGCGGGCGCCCTGGTCTTGG GGGCGATCTTGCTGCTCGCCCTTCCGACAGGCAAGGCGGGCTGA
Upstream 100 bases:
>100_bases TATAAGCCAACCGGCCCGGTTACCCGCGATGCTTTTCGCCTGACGCCCATAGGTCATTTCCGCTATTGCCAATGGTCCGA CCGGCGGGCCAGCTAGGTCG
Downstream 100 bases:
>100_bases GCGGCGGCGTAAGCCGATCACGTTAGGCCGATCAGGCCGCCCAATCAGCGCCGCCCATCAGCAAATCGACGCAATCGCGC GCCGTGCGATCGACCGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTALSSPGNSLRRPFGPSASLLMVCGAFLLVGSSVVASKVVTAAFPPFTATAVRFAIAVGLLIPWMVLSQGWPAWPGRRA VLALGLQALTGCVLFSVLLLEGLRRSGGVEAGLTLGTLPAVVALLAVPLLGERLDRRIGVAVLLAAGAGALLHGGKGAGG SGWLGPVLLFGAVVCEALFTLLGKRAVVHLSPVVTATAVSFASLALSLGPALTEQPLAALSSAPAAAWLGALWLGAPVTV GGFVLFHAGVAGTSGGAAGVASALVPLSAAGLSALLLGEALLPTDLMAGALVLGAILLLALPTGKAG
Sequences:
>Translated_307_residues MTALSSPGNSLRRPFGPSASLLMVCGAFLLVGSSVVASKVVTAAFPPFTATAVRFAIAVGLLIPWMVLSQGWPAWPGRRA VLALGLQALTGCVLFSVLLLEGLRRSGGVEAGLTLGTLPAVVALLAVPLLGERLDRRIGVAVLLAAGAGALLHGGKGAGG SGWLGPVLLFGAVVCEALFTLLGKRAVVHLSPVVTATAVSFASLALSLGPALTEQPLAALSSAPAAAWLGALWLGAPVTV GGFVLFHAGVAGTSGGAAGVASALVPLSAAGLSALLLGEALLPTDLMAGALVLGAILLLALPTGKAG >Mature_306_residues TALSSPGNSLRRPFGPSASLLMVCGAFLLVGSSVVASKVVTAAFPPFTATAVRFAIAVGLLIPWMVLSQGWPAWPGRRAV LALGLQALTGCVLFSVLLLEGLRRSGGVEAGLTLGTLPAVVALLAVPLLGERLDRRIGVAVLLAAGAGALLHGGKGAGGS GWLGPVLLFGAVVCEALFTLLGKRAVVHLSPVVTATAVSFASLALSLGPALTEQPLAALSSAPAAAWLGALWLGAPVTVG GFVLFHAGVAGTSGGAAGVASALVPLSAAGLSALLLGEALLPTDLMAGALVLGAILLLALPTGKAG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30114; Mature: 29983
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALSSPGNSLRRPFGPSASLLMVCGAFLLVGSSVVASKVVTAAFPPFTATAVRFAIAVG CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLIPWMVLSQGWPAWPGRRAVLALGLQALTGCVLFSVLLLEGLRRSGGVEAGLTLGTLPA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VVALLAVPLLGERLDRRIGVAVLLAAGAGALLHGGKGAGGSGWLGPVLLFGAVVCEALFT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHH LLGKRAVVHLSPVVTATAVSFASLALSLGPALTEQPLAALSSAPAAAWLGALWLGAPVTV HHCCHHHEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH GGFVLFHAGVAGTSGGAAGVASALVPLSAAGLSALLLGEALLPTDLMAGALVLGAILLLA HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPTGKAG CCCCCCC >Mature Secondary Structure TALSSPGNSLRRPFGPSASLLMVCGAFLLVGSSVVASKVVTAAFPPFTATAVRFAIAVG CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLIPWMVLSQGWPAWPGRRAVLALGLQALTGCVLFSVLLLEGLRRSGGVEAGLTLGTLPA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VVALLAVPLLGERLDRRIGVAVLLAAGAGALLHGGKGAGGSGWLGPVLLFGAVVCEALFT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHH LLGKRAVVHLSPVVTATAVSFASLALSLGPALTEQPLAALSSAPAAAWLGALWLGAPVTV HHCCHHHEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH GGFVLFHAGVAGTSGGAAGVASALVPLSAAGLSALLLGEALLPTDLMAGALVLGAILLLA HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPTGKAG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]