| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593209
Identifier: 83593209
GI number: 83593209
Start: 2171705
End: 2172034
Strand: Reverse
Name: 83593209
Synonym: Rru_A1874
Alternate gene names: NA
Gene position: 2172034-2171705 (Counterclockwise)
Preceding gene: 83593211
Following gene: 83593208
Centisome position: 49.9
GC content: 59.7
Gene sequence:
>330_bases TTGATGCGCCCGTGGGTACCGTTAGCATGGGGCGAGACGGATCCACCGCCGATGCTCCAGGGGGCTTCGCATAAAATGAC CGCCAGCCTCGATCACCTGACAAAGGCGGAACACAGGGCTATCGAGGATCTGTTTCTTCAAGAGATTACCGGCCGTCCGG CCGGGATTTCGCGTCGTGTCGGGCGGGCCCTGATCGAAAAGGGGTTGGTCGAGGAAACGGTCTTCATCATCGATTATAAG CCAACCGGCCCGGTTACCCGCGATGCTTTTCGCCTGACGCCCATAGGTCATTTCCGCTATTGCCAATGGTCCGACCGGCG GGCCAGCTAG
Upstream 100 bases:
>100_bases GCTGGATCCGCAGATGGTTTATCATAACAGAAAACCACTCGGGGAAACCGCTCCGCGCCTGCCGGGAGTCTTTTACTCGC AATTTGAGACATGTTTTTTC
Downstream 100 bases:
>100_bases GTCGATGACCGCGCTCTCCTCCCCAGGCAACAGCCTTCGTCGTCCGTTCGGCCCCTCGGCCAGTTTGCTGATGGTCTGCG GCGCCTTTCTGCTGGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MMRPWVPLAWGETDPPPMLQGASHKMTASLDHLTKAEHRAIEDLFLQEITGRPAGISRRVGRALIEKGLVEETVFIIDYK PTGPVTRDAFRLTPIGHFRYCQWSDRRAS
Sequences:
>Translated_109_residues MMRPWVPLAWGETDPPPMLQGASHKMTASLDHLTKAEHRAIEDLFLQEITGRPAGISRRVGRALIEKGLVEETVFIIDYK PTGPVTRDAFRLTPIGHFRYCQWSDRRAS >Mature_109_residues MMRPWVPLAWGETDPPPMLQGASHKMTASLDHLTKAEHRAIEDLFLQEITGRPAGISRRVGRALIEKGLVEETVFIIDYK PTGPVTRDAFRLTPIGHFRYCQWSDRRAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12398; Mature: 12398
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPWVPLAWGETDPPPMLQGASHKMTASLDHLTKAEHRAIEDLFLQEITGRPAGISRRV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GRALIEKGLVEETVFIIDYKPTGPVTRDAFRLTPIGHFRYCQWSDRRAS HHHHHHCCCCCCEEEEEEECCCCCCCCCCEECCCCCCEEEECCCCCCCC >Mature Secondary Structure MMRPWVPLAWGETDPPPMLQGASHKMTASLDHLTKAEHRAIEDLFLQEITGRPAGISRRV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GRALIEKGLVEETVFIIDYKPTGPVTRDAFRLTPIGHFRYCQWSDRRAS HHHHHHCCCCCCEEEEEEECCCCCCCCCCEECCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA