| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593118
Identifier: 83593118
GI number: 83593118
Start: 2074516
End: 2075217
Strand: Reverse
Name: 83593118
Synonym: Rru_A1783
Alternate gene names: NA
Gene position: 2075217-2074516 (Counterclockwise)
Preceding gene: 83593121
Following gene: 83593117
Centisome position: 47.68
GC content: 67.09
Gene sequence:
>702_bases ATGGCCCTTCTTACCACGGTGGGGCGGCGCGCGCTGCGGATGGTCGTGCCGGTCCTGGCGGTTTTCTGGGCCCTGGCCCC GCCGCAGGCCCTGGCCGCCGGCGACTGCGCGCCGGCCAGTGAGCAGCCCAAGGTGGTTTTAGTGTCGGGGTTTGGTCCCG TTCGCCAGAATTTCACCCGATCGGGCGAGGATCTGGCCGCCTTGCTGCGCCAAAGGGCGGGGGCCGCCGGCCGGCCGGTC GGCCATACGGTGGGGCTGACCGATACGCGACTCGATTACCAATACAGCACCAGGGTGCGCGCCGTGCCGATCGCCGAAGG CGGCGTCTGCGCCTATTTGTTGGAGCTGTCGATTCGCCTGCGTTATCCGCTGATTACCGTCTATGTCGCCCGCGAGTATC GCCGCGACAGCTGCCCCTTTCGCACGGCGCTCGAGCACGAATACGGCCATGTCGCGCGCTATCGCCAAGGCTACGAGGGG TTCTTGCCGGTGATCAAAGCCGCCGCCCTGCAGGCCATCGCCCTTAACAATCCCCTGCGCGTCGCCTCGATGGCCCAGGC GCGCGAGGCCCATGTCGAACGCCTGCGGGCGGTGTTCGACCCCTTGCTTGAAACCTTCAACGCCGAGCAACGCCGGCGCA ATCTTGATCTGGACACCCCGGAGAATTACGCCCGGGAACGGGCGCGATGCCCGGATTGGTAA
Upstream 100 bases:
>100_bases GTTGGGCAGGCGGGCCTTGACGCTGTTGACGTTGAAGGTGGCGATACTCACCATACGGACGGACTCCGAACCATAGTCCA TGAACAAAGGAAACCGGCGG
Downstream 100 bases:
>100_bases GGGCGACTGAACCCAATGGCGTGTCAGCCGTTGGGGATGTGGTGGCCACAAGGGGCCCCCACACCCCAAGGGAAGGATAC GACTCCCATGCCCAACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MALLTTVGRRALRMVVPVLAVFWALAPPQALAAGDCAPASEQPKVVLVSGFGPVRQNFTRSGEDLAALLRQRAGAAGRPV GHTVGLTDTRLDYQYSTRVRAVPIAEGGVCAYLLELSIRLRYPLITVYVAREYRRDSCPFRTALEHEYGHVARYRQGYEG FLPVIKAAALQAIALNNPLRVASMAQAREAHVERLRAVFDPLLETFNAEQRRRNLDLDTPENYARERARCPDW
Sequences:
>Translated_233_residues MALLTTVGRRALRMVVPVLAVFWALAPPQALAAGDCAPASEQPKVVLVSGFGPVRQNFTRSGEDLAALLRQRAGAAGRPV GHTVGLTDTRLDYQYSTRVRAVPIAEGGVCAYLLELSIRLRYPLITVYVAREYRRDSCPFRTALEHEYGHVARYRQGYEG FLPVIKAAALQAIALNNPLRVASMAQAREAHVERLRAVFDPLLETFNAEQRRRNLDLDTPENYARERARCPDW >Mature_232_residues ALLTTVGRRALRMVVPVLAVFWALAPPQALAAGDCAPASEQPKVVLVSGFGPVRQNFTRSGEDLAALLRQRAGAAGRPVG HTVGLTDTRLDYQYSTRVRAVPIAEGGVCAYLLELSIRLRYPLITVYVAREYRRDSCPFRTALEHEYGHVARYRQGYEGF LPVIKAAALQAIALNNPLRVASMAQAREAHVERLRAVFDPLLETFNAEQRRRNLDLDTPENYARERARCPDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25971; Mature: 25840
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLTTVGRRALRMVVPVLAVFWALAPPQALAAGDCAPASEQPKVVLVSGFGPVRQNFTR CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCC SGEDLAALLRQRAGAAGRPVGHTVGLTDTRLDYQYSTRVRAVPIAEGGVCAYLLELSIRL CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHH RYPLITVYVAREYRRDSCPFRTALEHEYGHVARYRQGYEGFLPVIKAAALQAIALNNPLR CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH VASMAQAREAHVERLRAVFDPLLETFNAEQRRRNLDLDTPENYARERARCPDW HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure ALLTTVGRRALRMVVPVLAVFWALAPPQALAAGDCAPASEQPKVVLVSGFGPVRQNFTR CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCC SGEDLAALLRQRAGAAGRPVGHTVGLTDTRLDYQYSTRVRAVPIAEGGVCAYLLELSIRL CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHH RYPLITVYVAREYRRDSCPFRTALEHEYGHVARYRQGYEGFLPVIKAAALQAIALNNPLR CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH VASMAQAREAHVERLRAVFDPLLETFNAEQRRRNLDLDTPENYARERARCPDW HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA