Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is 83593058

Identifier: 83593058

GI number: 83593058

Start: 2015591

End: 2016985

Strand: Reverse

Name: 83593058

Synonym: Rru_A1723

Alternate gene names: NA

Gene position: 2016985-2015591 (Counterclockwise)

Preceding gene: 83593060

Following gene: 83593052

Centisome position: 46.34

GC content: 62.87

Gene sequence:

>1395_bases
ATGCTTCGAGGGGGAGAGCGCGAGGTGGTTCACAAGGTTCTTATGCACGCCGGGGCCGCTACCCTGGCCTTGGGGGCGGC
CTTGCCGGCCCTGGCCCAGGAAAAATTCCCCGCCGAATTGGCCGGTCAGGCCATGCTGCCGGCGATGACCCTGGTTCAGC
CGCCGGCCGACGCCCCGGCCGCCCTTGCGGTCTCGGGCAAATTCACCCTGCCCGGGCAAAGGATCGACGCGGTGGGAACG
GTCGCCGGCACCTCGTTCCTGTCGGATAAGACGGCGCCGCGGCCGACCGGCTTGTCGCTGCCCTTCGCCGGGCAGCCGGT
TCAGGGGTTCTCCGGCATCGAAACCCTCAAGGATGGCACCTTCCGGGTGATTACCGATAACGGCTTCGGCGCCAAGGCCA
ATTCCGCCGACGCCATGCTGATGGTCCACACCCTGCGCCCCGATTGGGCGAGCGGCGTTCTCAGCCGGCTTTCGACGACC
TTCCTCGCCGATCCCGACCGCAAGCTGCCCTTCGTCATCGTCAATGAAGGGACCGAAACGCGCTATCTGACCGGTGCCGA
TCTCGATATCGAATCCGTCCAGCAGATCGGCGAGGATTTGTGGTTCGGCGAGGAATTCGGCCCCTATCTGCTGCGCACCG
ATCGAGCGGGCAAGGTGACGGGCTTCTTCCAGACCGAGGTTGACGGCAAGGTCGTTCATTCGCCCGACCATCTGGCGGTG
GCGACCCCGGCGGTTCCGGGCAAGGTGAGCTTCGAGATCCGCCGCTCGCGCGGTTTCGAAGGCATGGCCGCCTCGCCCGA
TGGCCGCTTCCTTTATCCGCTGCTTGAAGGGCCGTTGTGGATCGACGCCACCCAGACCTGGGAAACCAAGGACGGCAAGG
AAGTCCTGCGCATCTTGGAATTCGATGTGCAAAAGCAGGCCTGGAGCGGGCGCAGCTGGAAATACGCCCTGGAGGCCAAC
GGCAATAACATCGGCGATTTCAATATGATCGACGGCGAAACCGGCCTGATCATCGAACGCGACAACGGCGAGGGCGAGGC
CGCCCAGGCCTGTCCGGCCGAGCCTAAGCCCGAGTGCTTCAACATCCCGGCCCGTTTCAAGCGCGTCTATAAGATCGATT
TGTCGCAAGCCGATGGCGAAGGCGTCGTCAAGAAGATCGGCTATATCGATCTGCTCGATATCGACGATCCCAAGGGCCTC
GCCCACCAGGGCGGCCACGATGGCAAGCTGACCTTCCCCTTCGTCACCATCGAGAACGTCGACATCGTCGATGCCGATCA
CATCATCGTCGGCAATGACAACAATCTTCCCTATTCGACGGGGCGGGCCATCGGCCGCAACGACGATAACGAGATGATCT
TGCTGAAAGTCAGCGACTTCCTCAAAGCCAGATAA

Upstream 100 bases:

>100_bases
CCTGGTCCCCAAGGCCTGTCATCGAAGCTTTGCCATATCGTCACCGACTGTTCACTCGTCGCGCTCCCCCCGGCCTCTTA
TTCTCCGGCCGAAAGTCGCC

Downstream 100 bases:

>100_bases
GCGAGGGTCGGCAGAGGATTACAGAAATCCGGCTCCGACGTTGATGACCAGGGCGAGAATCGTCGTATTAAACAAAAATG
ATAAGATCGAATGGGATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Signal Peptide; Periplasmic Protein; Glycerophosphoryl Diester Phosphodiesterase Family; PEP-CTERM Exosortase Interaction Domain Protein

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPAALAVSGKFTLPGQRIDAVGT
VAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGTFRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTT
FLADPDRKLPFVIVNEGTETRYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV
ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILEFDVQKQAWSGRSWKYALEAN
GNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECFNIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGL
AHQGGHDGKLTFPFVTIENVDIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR

Sequences:

>Translated_464_residues
MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPAALAVSGKFTLPGQRIDAVGT
VAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGTFRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTT
FLADPDRKLPFVIVNEGTETRYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV
ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILEFDVQKQAWSGRSWKYALEAN
GNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECFNIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGL
AHQGGHDGKLTFPFVTIENVDIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR
>Mature_464_residues
MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPAALAVSGKFTLPGQRIDAVGT
VAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGTFRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTT
FLADPDRKLPFVIVNEGTETRYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV
ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILEFDVQKQAWSGRSWKYALEAN
GNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECFNIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGL
AHQGGHDGKLTFPFVTIENVDIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR

Specific function: Unknown

COG id: COG4222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50101; Mature: 50101

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCHHCCCHHEECCCCCCCC
ALAVSGKFTLPGQRIDAVGTVAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGT
EEEEECEEECCCCCCCCEEHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
FRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTTFLADPDRKLPFVIVNEGTET
EEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCE
RYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEECCCCEEE
ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILE
ECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCEEEECCCCCCCCCHHHHHHHHH
FDVQKQAWSGRSWKYALEANGNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECF
HHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCEEEEECCCCCCCHHHCCCCCCCCCCC
NIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGLAHQGGHDGKLTFPFVTIENV
CCCHHHEEEEEEECCCCCCCCHHHHCCEEEEEECCCCCCHHHCCCCCCEEEEEEEEECCE
DIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR
EEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCC
>Mature Secondary Structure
MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCHHCCCHHEECCCCCCCC
ALAVSGKFTLPGQRIDAVGTVAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGT
EEEEECEEECCCCCCCCEEHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
FRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTTFLADPDRKLPFVIVNEGTET
EEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCE
RYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEECCCCEEE
ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILE
ECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCEEEECCCCCCCCCHHHHHHHHH
FDVQKQAWSGRSWKYALEANGNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECF
HHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCEEEEECCCCCCCHHHCCCCCCCCCCC
NIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGLAHQGGHDGKLTFPFVTIENV
CCCHHHEEEEEEECCCCCCCCHHHHCCEEEEEECCCCCCHHHCCCCCCEEEEEEEEECCE
DIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR
EEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA