| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is sseA [H]
Identifier: 83592950
GI number: 83592950
Start: 1908496
End: 1909353
Strand: Reverse
Name: sseA [H]
Synonym: Rru_A1615
Alternate gene names: 83592950
Gene position: 1909353-1908496 (Counterclockwise)
Preceding gene: 83592951
Following gene: 83592948
Centisome position: 43.86
GC content: 67.72
Gene sequence:
>858_bases ATGACCCGTTCGCGCACCGAAGCCCTGGTCACCCCCCAGTGGCTCCACGATCATCTCGACGCCCCCGATCTGCGCATCAT CGATGCCAGCTATTTCATGCCGGCCAGCGGCCGCGACGCCCACCAGGAGTACGAGGCCGCCCATATTCCCGGGGCGATCT TCTTTGATATCAACGCCGTAGCCGACACCAGCCAACCCAAGCCGCATAGCCTGCCGGCCCCCGAGGTTTTCTCGTCGGCC TGCCGGGGATTGGGGATCGGCGATGGTCAGCGACTCGTCGTCTATGACCGCAACGGCGGGGCCATGGCCGCGGCCCGGGT GTGGTGGATGTTCCGGCTGTTTGGTCAGACCGAGGTCTCGGTTCTTGATGGCGGCCTGGGAGCCTGGCAGGCCGAGGGCC GCCCGACCGACGATCTGCCCCGCCTGCATGGGCGACGCCATTTCACCGCCCGCCTGGACAATACCCTGATGCGCACGGCG TCCCAGGTGCGCGAGGCGGTGGAAAGCGGCCGGGCCCAGGTGGTCGACGCCCGCTCAAGCGGCCGTTTCACCGCCACCGC CCCCGAACCCTGGCCGGTCGCCCGGGTCGGGCATATTCCGGGATCGATCAACCTGCCTTACACCGATCTGGTGGTGGCCA GCGAGCATGGCCGGCTGGCCGACCGCGAGATCCTGACCCAGGCCTTCGCCAAAGCCGGAGTCGATCTTGGCAAACCGCTG ATCGCCACCTGCGGCAGCGGGGTCAGCGCCTGCGTCATCGCCCTGGCCGCCGCCCAGCTTGGGCACGAGACCGTCGCGGT CTATGACGGATCGTGGTTCGAATGGAGCGGTCTAGCCGATTATCCGACCGCTCCCTAA
Upstream 100 bases:
>100_bases CGCTCGAAAGCCCTGCCGGTTCCCGACTGGCTGGCCTGAGCCGGCGATCCCGGTCCACCGGCCAACAGACCATGATAGTT CACGAAAGGAGCCGACGTTC
Downstream 100 bases:
>100_bases CGGCCCGCCCAGCGCCGCGACGGCGGTTTATTGGGCGGCTTCGCCACGGGCCAGCCCGTGATCGGCCTCGTCATCGTCCA TATCCAGGCCGAACTGGCCG
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTRSRTEALVTPQWLHDHLDAPDLRIIDASYFMPASGRDAHQEYEAAHIPGAIFFDINAVADTSQPKPHSLPAPEVFSSA CRGLGIGDGQRLVVYDRNGGAMAAARVWWMFRLFGQTEVSVLDGGLGAWQAEGRPTDDLPRLHGRRHFTARLDNTLMRTA SQVREAVESGRAQVVDARSSGRFTATAPEPWPVARVGHIPGSINLPYTDLVVASEHGRLADREILTQAFAKAGVDLGKPL IATCGSGVSACVIALAAAQLGHETVAVYDGSWFEWSGLADYPTAP
Sequences:
>Translated_285_residues MTRSRTEALVTPQWLHDHLDAPDLRIIDASYFMPASGRDAHQEYEAAHIPGAIFFDINAVADTSQPKPHSLPAPEVFSSA CRGLGIGDGQRLVVYDRNGGAMAAARVWWMFRLFGQTEVSVLDGGLGAWQAEGRPTDDLPRLHGRRHFTARLDNTLMRTA SQVREAVESGRAQVVDARSSGRFTATAPEPWPVARVGHIPGSINLPYTDLVVASEHGRLADREILTQAFAKAGVDLGKPL IATCGSGVSACVIALAAAQLGHETVAVYDGSWFEWSGLADYPTAP >Mature_284_residues TRSRTEALVTPQWLHDHLDAPDLRIIDASYFMPASGRDAHQEYEAAHIPGAIFFDINAVADTSQPKPHSLPAPEVFSSAC RGLGIGDGQRLVVYDRNGGAMAAARVWWMFRLFGQTEVSVLDGGLGAWQAEGRPTDDLPRLHGRRHFTARLDNTLMRTAS QVREAVESGRAQVVDARSSGRFTATAPEPWPVARVGHIPGSINLPYTDLVVASEHGRLADREILTQAFAKAGVDLGKPLI ATCGSGVSACVIALAAAQLGHETVAVYDGSWFEWSGLADYPTAP
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=273, Percent_Identity=44.6886446886447, Blast_Score=233, Evalue=1e-61, Organism=Homo sapiens, GI61835204, Length=273, Percent_Identity=44.6886446886447, Blast_Score=233, Evalue=1e-61, Organism=Homo sapiens, GI194473681, Length=273, Percent_Identity=44.6886446886447, Blast_Score=233, Evalue=1e-61, Organism=Homo sapiens, GI17402865, Length=274, Percent_Identity=45.2554744525547, Blast_Score=217, Evalue=8e-57, Organism=Escherichia coli, GI87082121, Length=286, Percent_Identity=42.3076923076923, Blast_Score=216, Evalue=1e-57, Organism=Escherichia coli, GI87081967, Length=298, Percent_Identity=27.5167785234899, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561888, Length=300, Percent_Identity=30.6666666666667, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71997283, Length=304, Percent_Identity=29.6052631578947, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17543836, Length=280, Percent_Identity=29.2857142857143, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17543838, Length=280, Percent_Identity=29.2857142857143, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI115534702, Length=209, Percent_Identity=29.1866028708134, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17533113, Length=154, Percent_Identity=33.7662337662338, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17559150, Length=248, Percent_Identity=22.5806451612903, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324825, Length=268, Percent_Identity=31.3432835820896, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30722; Mature: 30591
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSRTEALVTPQWLHDHLDAPDLRIIDASYFMPASGRDAHQEYEAAHIPGAIFFDINAV CCCCCCHHCCCHHHHHHCCCCCCEEEEECCEECCCCCCCHHHHHHHHCCCEEEEEEEEEC ADTSQPKPHSLPAPEVFSSACRGLGIGDGQRLVVYDRNGGAMAAARVWWMFRLFGQTEVS CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEE VLDGGLGAWQAEGRPTDDLPRLHGRRHFTARLDNTLMRTASQVREAVESGRAQVVDARSS EEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC GRFTATAPEPWPVARVGHIPGSINLPYTDLVVASEHGRLADREILTQAFAKAGVDLGKPL CCEEEECCCCCCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHH IATCGSGVSACVIALAAAQLGHETVAVYDGSWFEWSGLADYPTAP HHHCCCCHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCC >Mature Secondary Structure TRSRTEALVTPQWLHDHLDAPDLRIIDASYFMPASGRDAHQEYEAAHIPGAIFFDINAV CCCCCHHCCCHHHHHHCCCCCCEEEEECCEECCCCCCCHHHHHHHHCCCEEEEEEEEEC ADTSQPKPHSLPAPEVFSSACRGLGIGDGQRLVVYDRNGGAMAAARVWWMFRLFGQTEVS CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEE VLDGGLGAWQAEGRPTDDLPRLHGRRHFTARLDNTLMRTASQVREAVESGRAQVVDARSS EEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC GRFTATAPEPWPVARVGHIPGSINLPYTDLVVASEHGRLADREILTQAFAKAGVDLGKPL CCEEEECCCCCCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHH IATCGSGVSACVIALAAAQLGHETVAVYDGSWFEWSGLADYPTAP HHHCCCCHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]