| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is hisI
Identifier: 83592947
GI number: 83592947
Start: 1906141
End: 1906572
Strand: Reverse
Name: hisI
Synonym: Rru_A1612
Alternate gene names: 83592947
Gene position: 1906572-1906141 (Counterclockwise)
Preceding gene: 83592948
Following gene: 83592946
Centisome position: 43.8
GC content: 66.2
Gene sequence:
>432_bases ATGAAGAACACCTCCGCCCTCGCCGAAACCGCCGCCCTATGGGCGGCGGTGAGGTTCACCGCCGATGGATTGGTGCCGGT CATCGCCCAGCAGCATGACAGCGGCGAGGTTCTGATGATGGCCTGGATGAACCGCGAGGCCCTTGAGGAAACCCTGGTGA CTGGCAAGGCCTGTTACTGGTCGCGCTCGCGCGGACGGCTGTGGCGCAAGGGCGAAAGCTCGGGCCAGACCCAGAAGGTC CTGGCGCTCCGCCTCGATTGCGACGGCGACACCATCTTGCTGCTTGTCGACCAGACGGGCGTGGCCTGCCATACCGGGCG GCGCAGTTGCTTTTTCAACGAGGTCGGGCCGACAGGCGAGATCACCGTGGTCAGCGCGCCGCTGGTCACCCCCGAAGCCC TGTACGGCGCGGAAGGACACTCCCACCCATGA
Upstream 100 bases:
>100_bases GCCCGTCGCTGCGCCTGCATATCGGCCTGGAAGACCCGGCCGATCTGATCGCCGATCTGCGCGCCGGCCTCGACCGCCTG GGTGAAAAGGCCCTGGATCA
Downstream 100 bases:
>100_bases TGACCATTCCCGTAACCATCCTGACCGGTTTTTTGGGCAGCGGCAAAAGCACCTTGCTTAATCGTCTGCTGCGCCATCCG GCGATGGGCGAAACCGCCGT
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKNTSALAETAALWAAVRFTADGLVPVIAQQHDSGEVLMMAWMNREALEETLVTGKACYWSRSRGRLWRKGESSGQTQKV LALRLDCDGDTILLLVDQTGVACHTGRRSCFFNEVGPTGEITVVSAPLVTPEALYGAEGHSHP
Sequences:
>Translated_143_residues MKNTSALAETAALWAAVRFTADGLVPVIAQQHDSGEVLMMAWMNREALEETLVTGKACYWSRSRGRLWRKGESSGQTQKV LALRLDCDGDTILLLVDQTGVACHTGRRSCFFNEVGPTGEITVVSAPLVTPEALYGAEGHSHP >Mature_143_residues MKNTSALAETAALWAAVRFTADGLVPVIAQQHDSGEVLMMAWMNREALEETLVTGKACYWSRSRGRLWRKGESSGQTQKV LALRLDCDGDTILLLVDQTGVACHTGRRSCFFNEVGPTGEITVVSAPLVTPEALYGAEGHSHP
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=90, Percent_Identity=52.2222222222222, Blast_Score=104, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319819, Length=92, Percent_Identity=34.7826086956522, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_RHORT (Q2RTY3)
Other databases:
- EMBL: CP000230 - RefSeq: YP_426699.1 - ProteinModelPortal: Q2RTY3 - SMR: Q2RTY3 - STRING: Q2RTY3 - GeneID: 3835029 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A1612 - NMPDR: fig|1085.1.peg.2755 - eggNOG: COG0139 - HOGENOM: HBG294308 - OMA: GRRTCFH - BioCyc: RRUB269796:RRU_A1612-MONOMER - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 15488; Mature: 15488
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTSALAETAALWAAVRFTADGLVPVIAQQHDSGEVLMMAWMNREALEETLVTGKACYW CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCEEE SRSRGRLWRKGESSGQTQKVLALRLDCDGDTILLLVDQTGVACHTGRRSCFFNEVGPTGE ECCCCCEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCCCEEECCCCCEEECCCCCCCC ITVVSAPLVTPEALYGAEGHSHP EEEEECCCCCCHHHCCCCCCCCC >Mature Secondary Structure MKNTSALAETAALWAAVRFTADGLVPVIAQQHDSGEVLMMAWMNREALEETLVTGKACYW CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCEEE SRSRGRLWRKGESSGQTQKVLALRLDCDGDTILLLVDQTGVACHTGRRSCFFNEVGPTGE ECCCCCEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCCCEEECCCCCEEECCCCCCCC ITVVSAPLVTPEALYGAEGHSHP EEEEECCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA