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The map label for this gene is yjiA [H]

Identifier: 83592946

GI number: 83592946

Start: 1905044

End: 1906144

Strand: Reverse

Name: yjiA [H]

Synonym: Rru_A1611

Alternate gene names: 83592946

Gene position: 1906144-1905044 (Counterclockwise)

Preceding gene: 83592947

Following gene: 83592938

Centisome position: 43.79

GC content: 62.58

Gene sequence:

>1101_bases
ATGATGACCATTCCCGTAACCATCCTGACCGGTTTTTTGGGCAGCGGCAAAAGCACCTTGCTTAATCGTCTGCTGCGCCA
TCCGGCGATGGGCGAAACCGCCGTGGTCATCAATGAATTCGGCGAGGTCGGCCTGGACCACCTGCTGGTGCGTCAGGTCG
ACGAGGACATCGTTTTGCTCAACGCCGGGTGCCTGTGCTGCACCGTGCGCGGCGACATGGTCACGGCGCTGCACGATCTG
TTCTTGAAGCGGGTGCGCGGCGATGTGCCCGAGTTCCAGCGGCTAGCCATCGAAACCACCGGCCTTGCCGATCCGGCGCC
GATCATCCACACCCTGATGACCGACCCACTGATTGGCGGGCGCTTCCGTCTTGACGGGGTGGTCACGGTGATCGACGCCG
TCAACGGCGAGAAAGAGCTTGATGAGCATATCGAAGCGGTCAAGCAGGCCGCCGTCGCCGATAGGCTGGTGCTGAGCAAG
ACCGATCTTGTCGAAGATAGCGCGGCGCTCAAGGCCCGGCTGAAGGCGCTCAACCCGGCGGCCATCGTGCTGGAAGCCAT
CGAGGGCGATATCCATCCCGACGCCCTGCTTGACTGCGGCCTGTTCTCCAGCAGCGGCAAGGCCCCCGACGTGGCGCAAT
GGCTGCGCGACGAGGCCTATCGCGACCGCGACGAGCAGCACCATGGGCATGGACACCATCACGATCACGATCACCACGAC
CATGATCATGGTCACGATCACCACCATGACCACCACCCTCATGACGTGAACCGCCATGATGCGCGGATTTCCTCGTTCTG
CCTGACCTTCGACGAACCGCTCGATTGGGAGCTTTTCGTCTCCGCCCTCGAGATGCTGATTTCAAGCAAGGGCGAAGATC
TGTTGCGGATCAAGGGGATCTTGGATGTCATCGGCCAGGACCGGCCGATCGCCGTTCATGGCGTCCAACACGTCTTTCAC
CCGCCCGTTCCTTTGCCCGCTTGGCCGGCCGGCGAACCGAAAACCTCGAAGCTGGTCTTCATCACCCGCGATCTCGACCG
CGCCACCGTCGAGGGGCTGCTGCGCGCCGCCCTCGGCGGCCAGGAGGTTCTACTCGACTAA

Upstream 100 bases:

>100_bases
GCTTTTTCAACGAGGTCGGGCCGACAGGCGAGATCACCGTGGTCAGCGCGCCGCTGGTCACCCCCGAAGCCCTGTACGGC
GCGGAAGGACACTCCCACCC

Downstream 100 bases:

>100_bases
AAAATACCGCCCCTCGCGCTTGCTTGTCAGCCTTGCGCGCCGCTCTAATCTATTGAATTTAGATCAAACTGCGTTGAATG
GGGGCCATTTCACGCAGTTT

Product: cobalamin synthesis protein/P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MMTIPVTILTGFLGSGKSTLLNRLLRHPAMGETAVVINEFGEVGLDHLLVRQVDEDIVLLNAGCLCCTVRGDMVTALHDL
FLKRVRGDVPEFQRLAIETTGLADPAPIIHTLMTDPLIGGRFRLDGVVTVIDAVNGEKELDEHIEAVKQAAVADRLVLSK
TDLVEDSAALKARLKALNPAAIVLEAIEGDIHPDALLDCGLFSSSGKAPDVAQWLRDEAYRDRDEQHHGHGHHHDHDHHD
HDHGHDHHHDHHPHDVNRHDARISSFCLTFDEPLDWELFVSALEMLISSKGEDLLRIKGILDVIGQDRPIAVHGVQHVFH
PPVPLPAWPAGEPKTSKLVFITRDLDRATVEGLLRAALGGQEVLLD

Sequences:

>Translated_366_residues
MMTIPVTILTGFLGSGKSTLLNRLLRHPAMGETAVVINEFGEVGLDHLLVRQVDEDIVLLNAGCLCCTVRGDMVTALHDL
FLKRVRGDVPEFQRLAIETTGLADPAPIIHTLMTDPLIGGRFRLDGVVTVIDAVNGEKELDEHIEAVKQAAVADRLVLSK
TDLVEDSAALKARLKALNPAAIVLEAIEGDIHPDALLDCGLFSSSGKAPDVAQWLRDEAYRDRDEQHHGHGHHHDHDHHD
HDHGHDHHHDHHPHDVNRHDARISSFCLTFDEPLDWELFVSALEMLISSKGEDLLRIKGILDVIGQDRPIAVHGVQHVFH
PPVPLPAWPAGEPKTSKLVFITRDLDRATVEGLLRAALGGQEVLLD
>Mature_366_residues
MMTIPVTILTGFLGSGKSTLLNRLLRHPAMGETAVVINEFGEVGLDHLLVRQVDEDIVLLNAGCLCCTVRGDMVTALHDL
FLKRVRGDVPEFQRLAIETTGLADPAPIIHTLMTDPLIGGRFRLDGVVTVIDAVNGEKELDEHIEAVKQAAVADRLVLSK
TDLVEDSAALKARLKALNPAAIVLEAIEGDIHPDALLDCGLFSSSGKAPDVAQWLRDEAYRDRDEQHHGHGHHHDHDHHD
HDHGHDHHHDHHPHDVNRHDARISSFCLTFDEPLDWELFVSALEMLISSKGEDLLRIKGILDVIGQDRPIAVHGVQHVFH
PPVPLPAWPAGEPKTSKLVFITRDLDRATVEGLLRAALGGQEVLLD

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=383, Percent_Identity=28.1984334203655, Blast_Score=135, Evalue=4e-32,
Organism=Homo sapiens, GI126722884, Length=383, Percent_Identity=27.9373368146214, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI148727351, Length=383, Percent_Identity=27.9373368146214, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI146231952, Length=383, Percent_Identity=28.4595300261097, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI223941779, Length=196, Percent_Identity=37.7551020408163, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI223941776, Length=373, Percent_Identity=26.5415549597855, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI119120938, Length=145, Percent_Identity=38.6206896551724, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI87082430, Length=361, Percent_Identity=32.409972299169, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1788499, Length=159, Percent_Identity=35.2201257861635, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324356, Length=388, Percent_Identity=28.3505154639175, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40296; Mature: 40296

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTIPVTILTGFLGSGKSTLLNRLLRHPAMGETAVVINEFGEVGLDHLLVRQVDEDIVLL
CCEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NAGCLCCTVRGDMVTALHDLFLKRVRGDVPEFQRLAIETTGLADPAPIIHTLMTDPLIGG
ECCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
RFRLDGVVTVIDAVNGEKELDEHIEAVKQAAVADRLVLSKTDLVEDSAALKARLKALNPA
EEECCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AIVLEAIEGDIHPDALLDCGLFSSSGKAPDVAQWLRDEAYRDRDEQHHGHGHHHDHDHHD
HHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC
HDHGHDHHHDHHPHDVNRHDARISSFCLTFDEPLDWELFVSALEMLISSKGEDLLRIKGI
CCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
LDVIGQDRPIAVHGVQHVFHPPVPLPAWPAGEPKTSKLVFITRDLDRATVEGLLRAALGG
HHHHCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
QEVLLD
CCCCCC
>Mature Secondary Structure
MMTIPVTILTGFLGSGKSTLLNRLLRHPAMGETAVVINEFGEVGLDHLLVRQVDEDIVLL
CCEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NAGCLCCTVRGDMVTALHDLFLKRVRGDVPEFQRLAIETTGLADPAPIIHTLMTDPLIGG
ECCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
RFRLDGVVTVIDAVNGEKELDEHIEAVKQAAVADRLVLSKTDLVEDSAALKARLKALNPA
EEECCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AIVLEAIEGDIHPDALLDCGLFSSSGKAPDVAQWLRDEAYRDRDEQHHGHGHHHDHDHHD
HHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC
HDHGHDHHHDHHPHDVNRHDARISSFCLTFDEPLDWELFVSALEMLISSKGEDLLRIKGI
CCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
LDVIGQDRPIAVHGVQHVFHPPVPLPAWPAGEPKTSKLVFITRDLDRATVEGLLRAALGG
HHHHCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
QEVLLD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]