| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592779
Identifier: 83592779
GI number: 83592779
Start: 1706399
End: 1707355
Strand: Reverse
Name: 83592779
Synonym: Rru_A1443
Alternate gene names: NA
Gene position: 1707355-1706399 (Counterclockwise)
Preceding gene: 83592783
Following gene: 83592777
Centisome position: 39.22
GC content: 60.08
Gene sequence:
>957_bases ATGACGGACCCGGTGAATTTTGATGCGGACGATATTCCGGGCGTGGAAAATGAACATGATATCGTTTGGCAGATTCTATC GGACAAACTGAGGAAAGACTGCGCCCAGGCCGTCGATGACGACTACGGCAAAAAGTATCTACCCTTTACCGCCGGACAGC TTGTTCATCGCGTCACTTTCGCCTTATCCTATTACGATCAGAAGATCGGCAATTTGTTCCGCTGGGCGACGAAATCCGTC GAGGGCGACAACTACACCTACCAACTGACCGAGCGGAATCGCCGCCATCTGGCCCATTTCGTCTCTGTGGTCACCGGGCA CCCGGAAAGCGAAATCTCGGCCTACATCGAGGAAATCAACGACGACGGCGCCCTGCGCGCCCATTTCGCCACGGTGATGC AGGGGCGCCAGGGGCCGATGGACATCGGGTTCCATCCCGGACGGCGCATGGGCTGGTATGCCATCGTCCGCGCCCTGAAA CCGAAGATCGTCGTCGAGACCGGGGTGGCCCGGGGCCACGGCTCCCTCACCCTGGCCGCAGCGATCTTGCGCAACCGGGC CGAGGGCCATGCGGGGCGCTATGTCGGCACCGATATCAACCCGGAGGCCGGCATGCTGTTTTGTGGGGACTACGCGCAAG CCGGCACTATCTTGTATGGCGACAGCCTTGAATCCTTGTGGGCTTTCAACGAGAAGATCGATCTCTTCATCAATGACAGC GACCATTCCGCCAGCTACGAGAGCGAGGAATACGACCTGATCGAGTCCAAGCTTGCCGAGAACGCCCTTATCCTCGGCGA CAACGCCCACGCCACCGACGCCCTGCTTGAATTCTCCCGCCGCACCGGCCGGAATTTCCTGTTCTTCCGCGAAGACCCGC AAGGCCATTGGTACCCGGGCGCCGGCATCGGCGTGGCCTTCCCCGCTTTCCCTAAAACCTCATCCGGGCGGTCATGA
Upstream 100 bases:
>100_bases GCGATCAGCGGCGACCAAAGATACAACCATATTGCTACAGAATGGTCCTTGGGGTAAAAACGTTGAACAGACCCGCCCTG TTTTTGGAGAAGATCCAGCG
Downstream 100 bases:
>100_bases CAGCGCCTCCGGGGGAGTCATGGCCTCACGCTGGCGCCGCCCGGTTCGGGCGAGACCATCTCGCATGTTCCGAGCCAAAA GCACGAGATTGACGGCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTDPVNFDADDIPGVENEHDIVWQILSDKLRKDCAQAVDDDYGKKYLPFTAGQLVHRVTFALSYYDQKIGNLFRWATKSV EGDNYTYQLTERNRRHLAHFVSVVTGHPESEISAYIEEINDDGALRAHFATVMQGRQGPMDIGFHPGRRMGWYAIVRALK PKIVVETGVARGHGSLTLAAAILRNRAEGHAGRYVGTDINPEAGMLFCGDYAQAGTILYGDSLESLWAFNEKIDLFINDS DHSASYESEEYDLIESKLAENALILGDNAHATDALLEFSRRTGRNFLFFREDPQGHWYPGAGIGVAFPAFPKTSSGRS
Sequences:
>Translated_318_residues MTDPVNFDADDIPGVENEHDIVWQILSDKLRKDCAQAVDDDYGKKYLPFTAGQLVHRVTFALSYYDQKIGNLFRWATKSV EGDNYTYQLTERNRRHLAHFVSVVTGHPESEISAYIEEINDDGALRAHFATVMQGRQGPMDIGFHPGRRMGWYAIVRALK PKIVVETGVARGHGSLTLAAAILRNRAEGHAGRYVGTDINPEAGMLFCGDYAQAGTILYGDSLESLWAFNEKIDLFINDS DHSASYESEEYDLIESKLAENALILGDNAHATDALLEFSRRTGRNFLFFREDPQGHWYPGAGIGVAFPAFPKTSSGRS >Mature_317_residues TDPVNFDADDIPGVENEHDIVWQILSDKLRKDCAQAVDDDYGKKYLPFTAGQLVHRVTFALSYYDQKIGNLFRWATKSVE GDNYTYQLTERNRRHLAHFVSVVTGHPESEISAYIEEINDDGALRAHFATVMQGRQGPMDIGFHPGRRMGWYAIVRALKP KIVVETGVARGHGSLTLAAAILRNRAEGHAGRYVGTDINPEAGMLFCGDYAQAGTILYGDSLESLWAFNEKIDLFINDSD HSASYESEEYDLIESKLAENALILGDNAHATDALLEFSRRTGRNFLFFREDPQGHWYPGAGIGVAFPAFPKTSSGRS
Specific function: Unknown
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35456; Mature: 35325
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPVNFDADDIPGVENEHDIVWQILSDKLRKDCAQAVDDDYGKKYLPFTAGQLVHRVTF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH ALSYYDQKIGNLFRWATKSVEGDNYTYQLTERNRRHLAHFVSVVTGHPESEISAYIEEIN HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC DDGALRAHFATVMQGRQGPMDIGFHPGRRMGWYAIVRALKPKIVVETGVARGHGSLTLAA CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH AILRNRAEGHAGRYVGTDINPEAGMLFCGDYAQAGTILYGDSLESLWAFNEKIDLFINDS HHHHHCCCCCCCCEECCCCCCCCCEEEECCCCCCCEEEECCCHHHHHHCCCEEEEEEECC DHSASYESEEYDLIESKLAENALILGDNAHATDALLEFSRRTGRNFLFFREDPQGHWYPG CCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCC AGIGVAFPAFPKTSSGRS CCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDPVNFDADDIPGVENEHDIVWQILSDKLRKDCAQAVDDDYGKKYLPFTAGQLVHRVTF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH ALSYYDQKIGNLFRWATKSVEGDNYTYQLTERNRRHLAHFVSVVTGHPESEISAYIEEIN HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC DDGALRAHFATVMQGRQGPMDIGFHPGRRMGWYAIVRALKPKIVVETGVARGHGSLTLAA CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH AILRNRAEGHAGRYVGTDINPEAGMLFCGDYAQAGTILYGDSLESLWAFNEKIDLFINDS HHHHHCCCCCCCCEECCCCCCCCCEEEECCCCCCCEEEECCCHHHHHHCCCEEEEEEECC DHSASYESEEYDLIESKLAENALILGDNAHATDALLEFSRRTGRNFLFFREDPQGHWYPG CCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCC AGIGVAFPAFPKTSSGRS CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA